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Tan0006657 (gene) of Snake gourd v1 genome

Gene IDTan0006657
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG04:46084128..46084466
RNA-Seq ExpressionTan0006657
SyntenyTan0006657
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]8.9e-4080.36Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ MFGQ S  + HDALKY+YN+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQTFESLMKSK
        ELQTFESLMK K
Subjt:  ELQTFESLMKSK
KAA0046415.1 gag/pol protein [Cucumis melo var. makuwa]8.9e-4079.46Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ MFGQ S  + HDALKY+YN+RM EGASVREHVLNMMVHFN+AE+NG VIDE SQVSFI+ESLS+SFLQFR+NAVMNKI Y LTT+LN
Subjt:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQTFESLMKSK
        ELQTFESLMK K
Subjt:  ELQTFESLMKSK
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]8.9e-4080.36Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ MFGQ S  + HDALKY+YN+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQTFESLMKSK
        ELQTFESLMK K
Subjt:  ELQTFESLMKSK
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]8.9e-4080.36Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ MFGQ S  + HDALKY+YN+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQTFESLMKSK
        ELQTFESLMK K
Subjt:  ELQTFESLMKSK
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]8.9e-4080.36Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ MFGQ S  + HDALKY+YN+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQTFESLMKSK
        ELQTFESLMK K
Subjt:  ELQTFESLMKSK
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein4.3e-4080.36Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ MFGQ S  + HDALKY+YN+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQTFESLMKSK
        ELQTFESLMK K
Subjt:  ELQTFESLMKSK
A0A5A7TU93 Gag/pol protein4.3e-4080.36Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ MFGQ S  + HDALKY+YN+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQTFESLMKSK
        ELQTFESLMK K
Subjt:  ELQTFESLMKSK
A0A5A7TWB9 Gag/pol protein4.3e-4080.36Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ MFGQ S  + HDALKY+YN+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQTFESLMKSK
        ELQTFESLMK K
Subjt:  ELQTFESLMKSK
A0A5A7V4M1 Gag/pol protein4.3e-4080.36Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ MFGQ S  + HDALKY+YN+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQTFESLMKSK
        ELQTFESLMK K
Subjt:  ELQTFESLMKSK
A0A5D3CPJ6 Gag/pol protein4.3e-4080.36Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ MFGQ S  + HDALKY+YN+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQTFESLMKSK
        ELQTFESLMK K
Subjt:  ELQTFESLMKSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCACCGCGAAGGAGATCATGGGATCATTGCAGGCGATGTTTGGACAACCGTCCTCATCGGTCCTCCATGATGCTCTCAAGTACGTTTACAATTCCCGTATGAAGGA
GGGAGCTTCTGTTAGGGAACATGTCCTTAACATGATGGTCCACTTCAACGTGGCAGAAGTAAATGGTGTTGTCATAGATGAGAAGAGTCAGGTTAGCTTTATTATGGAAT
CTCTTTCGAAGAGTTTCCTGCAATTCCGCACTAATGCGGTTATGAATAAAATAGAGTATAACCTAACCACTTTACTCAACGAGCTTCAGACTTTTGAGTCCCTGATGAAA
TCAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCACCGCGAAGGAGATCATGGGATCATTGCAGGCGATGTTTGGACAACCGTCCTCATCGGTCCTCCATGATGCTCTCAAGTACGTTTACAATTCCCGTATGAAGGA
GGGAGCTTCTGTTAGGGAACATGTCCTTAACATGATGGTCCACTTCAACGTGGCAGAAGTAAATGGTGTTGTCATAGATGAGAAGAGTCAGGTTAGCTTTATTATGGAAT
CTCTTTCGAAGAGTTTCCTGCAATTCCGCACTAATGCGGTTATGAATAAAATAGAGTATAACCTAACCACTTTACTCAACGAGCTTCAGACTTTTGAGTCCCTGATGAAA
TCAAAGTGA
Protein sequenceShow/hide protein sequence
MVTAKEIMGSLQAMFGQPSSSVLHDALKYVYNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLSKSFLQFRTNAVMNKIEYNLTTLLNELQTFESLMK
SK