; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0006659 (gene) of Snake gourd v1 genome

Gene IDTan0006659
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGirdin-like
Genome locationLG01:88122434..88131784
RNA-Seq ExpressionTan0006659
SyntenyTan0006659
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036941.1 girdin-like [Cucumis melo var. makuwa]3.4e-3129.96Show/hide
Query:  VDFFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQF
        + FF+KL +E+V+W+A WM  K ++Y+CG F ++PL+GPW  + Y PL+VL Q+W++QFIP TH L++S+F+Y+ + C+ K +Q V AWK   KIK    
Subjt:  VDFFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQF

Query:  HDDTSDTYKMWHSDRAK--IMVTSSIIKVKVEVRPDQMKQ---------------------------GWL-HNAQLEKELNQIIGSVSKQGKLEKEILTL
        ++  +  Y+ W ++R K  I ++  +++   E   +Q  Q                            W+ H   L+ EL +    +  Q KLEK++ TL
Subjt:  HDDTSDTYKMWHSDRAK--IMVTSSIIKVKVEVRPDQMKQ---------------------------GWL-HNAQLEKELNQIIGSVSKQGKLEKEILTL

Query:  DTKARDLNRRMHRLRRDKEISEATL--------KSQQFEI------------TTLCEQAKRLEEDIDSRNKEITKIR
        D + R +N+    L+ +K   +AT+        +S+++EI            T L   +KR+ ++ +S N +  +++
Subjt:  DTKARDLNRRMHRLRRDKEISEATL--------KSQQFEI------------TTLCEQAKRLEEDIDSRNKEITKIR

TYK23955.1 girdin-like [Cucumis melo var. makuwa]9.9e-3132.1Show/hide
Query:  VDFFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQF
        + FF+KL +E+V+W+A WM  K ++Y+CG F ++PL+GPW  + Y PL+VL Q+W++QFIP TH L++S+F+Y+ + C+ K +Q V AWK   KIK    
Subjt:  VDFFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQF

Query:  HDDTSDTYKMWHSDRAK--IMVTSSIIKVKVEVRPDQMKQ---------------------------GWL-HNAQLEKELNQIIGSVSKQGKLEKEILTL
        ++  +  Y+ W ++R K  I ++  +++   E   +Q  Q                            W+ H A L+ EL +   S+  Q KLEK + TL
Subjt:  HDDTSDTYKMWHSDRAK--IMVTSSIIKVKVEVRPDQMKQ---------------------------GWL-HNAQLEKELNQIIGSVSKQGKLEKEILTL

Query:  DTKARDLNRRMHRLRRDKEISEATLKSQQFEITTL-------CEQAKRLEEDIDSRNKEITKIREENVTLR
        D + R +N+    L+ +K   +AT+ S+   I  L        E    L   I  R  +I  +   N +LR
Subjt:  DTKARDLNRRMHRLRRDKEISEATLKSQQFEITTL-------CEQAKRLEEDIDSRNKEITKIREENVTLR

XP_022147190.1 uncharacterized protein LOC111016201 [Momordica charantia]3.1e-4063.56Show/hide
Query:  FFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQFHD
        FF+ L+ EDV WRA WMSTKPMMY+CGKF +L L+GPW C++YAPLMVL QIWVRQFIP TH+LR+SEFAY+  FCKNK+Q++V+AWK   +I+SG +HD
Subjt:  FFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQFHD

Query:  DTSDTYKMWHSDRAKIMV
        +  + Y+ WHS R K +V
Subjt:  DTSDTYKMWHSDRAKIMV

XP_022150759.1 uncharacterized protein LOC111018820 [Momordica charantia]1.1e-4063.56Show/hide
Query:  FFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQFHD
        FF+ L++EDV WRA WMSTKPMMY+CGKF +LPL+GP  C++YAPLMVL QIWVRQFIP TH+LR+SEFAY+ +FCKNK+Q++V+AWK   +I+SG +HD
Subjt:  FFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQFHD

Query:  DTSDTYKMWHSDRAKIMV
        +  + Y+ WHS R K +V
Subjt:  DTSDTYKMWHSDRAKIMV

XP_031740432.1 uncharacterized protein LOC116403430 [Cucumis sativus]4.7e-3334.47Show/hide
Query:  VDFFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQF
        V FFS L +EDV+W+A WM  K ++Y+CG F ++PL+GPW  + Y PL+VL Q+W++QFIP TH L+DS+FAY+ + C+ K  + V AWK   KIK    
Subjt:  VDFFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQF

Query:  HDDTSDTYKMWHSDRAK-IMVTSSIIKVKVEVRPDQMKQGWL-----------------------------HNAQLEKELNQIIGSVSKQGKLEKEILTL
        ++  +  Y+ W ++R K ++ T   +  +VE    +    W+                             H   L+KEL +    +  Q KLEK +  L
Subjt:  HDDTSDTYKMWHSDRAK-IMVTSSIIKVKVEVRPDQMKQGWL-----------------------------HNAQLEKELNQIIGSVSKQGKLEKEILTL

Query:  DTKARDLNRRMHRLRRDKEISEATLKSQQFEITTL
        D + R +N+    L+ +K I +AT++SQ   I  L
Subjt:  DTKARDLNRRMHRLRRDKEISEATLKSQQFEITTL

TrEMBL top hitse value%identityAlignment
A0A5A7T5S7 Girdin-like1.6e-3129.96Show/hide
Query:  VDFFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQF
        + FF+KL +E+V+W+A WM  K ++Y+CG F ++PL+GPW  + Y PL+VL Q+W++QFIP TH L++S+F+Y+ + C+ K +Q V AWK   KIK    
Subjt:  VDFFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQF

Query:  HDDTSDTYKMWHSDRAK--IMVTSSIIKVKVEVRPDQMKQ---------------------------GWL-HNAQLEKELNQIIGSVSKQGKLEKEILTL
        ++  +  Y+ W ++R K  I ++  +++   E   +Q  Q                            W+ H   L+ EL +    +  Q KLEK++ TL
Subjt:  HDDTSDTYKMWHSDRAK--IMVTSSIIKVKVEVRPDQMKQ---------------------------GWL-HNAQLEKELNQIIGSVSKQGKLEKEILTL

Query:  DTKARDLNRRMHRLRRDKEISEATL--------KSQQFEI------------TTLCEQAKRLEEDIDSRNKEITKIR
        D + R +N+    L+ +K   +AT+        +S+++EI            T L   +KR+ ++ +S N +  +++
Subjt:  DTKARDLNRRMHRLRRDKEISEATL--------KSQQFEI------------TTLCEQAKRLEEDIDSRNKEITKIR

A0A5D3CZ50 Girdin-like5.8e-2932.29Show/hide
Query:  VDFFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQF
        + FF+KL +E+V+W+A WM  K ++Y+CG F ++PL+GPW  + Y PL+VL Q+W++QFIP TH L++S+F+Y+ + C+ K +Q V AWK   KIK    
Subjt:  VDFFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQF

Query:  HDDTSDTYKMWHSDRAK--IMVTSSIIKVKVEVRPDQMKQ---------------------------GWL-HNAQLEKELNQIIGSVSKQGKLEKEILTL
        ++  +  Y+ W ++R K  I ++  +++   E   +Q  Q                            W+ H   L+ EL +    +  Q  LEK++ TL
Subjt:  HDDTSDTYKMWHSDRAK--IMVTSSIIKVKVEVRPDQMKQ---------------------------GWL-HNAQLEKELNQIIGSVSKQGKLEKEILTL

Query:  DTKARDLNRRMHRLRRDKEISEA
        D + R +N+    L+ +K   +A
Subjt:  DTKARDLNRRMHRLRRDKEISEA

A0A5D3DK34 Girdin-like4.8e-3132.1Show/hide
Query:  VDFFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQF
        + FF+KL +E+V+W+A WM  K ++Y+CG F ++PL+GPW  + Y PL+VL Q+W++QFIP TH L++S+F+Y+ + C+ K +Q V AWK   KIK    
Subjt:  VDFFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQF

Query:  HDDTSDTYKMWHSDRAK--IMVTSSIIKVKVEVRPDQMKQ---------------------------GWL-HNAQLEKELNQIIGSVSKQGKLEKEILTL
        ++  +  Y+ W ++R K  I ++  +++   E   +Q  Q                            W+ H A L+ EL +   S+  Q KLEK + TL
Subjt:  HDDTSDTYKMWHSDRAK--IMVTSSIIKVKVEVRPDQMKQ---------------------------GWL-HNAQLEKELNQIIGSVSKQGKLEKEILTL

Query:  DTKARDLNRRMHRLRRDKEISEATLKSQQFEITTL-------CEQAKRLEEDIDSRNKEITKIREENVTLR
        D + R +N+    L+ +K   +AT+ S+   I  L        E    L   I  R  +I  +   N +LR
Subjt:  DTKARDLNRRMHRLRRDKEISEATLKSQQFEITTL-------CEQAKRLEEDIDSRNKEITKIREENVTLR

A0A6J1CZG4 uncharacterized protein LOC1110162011.5e-4063.56Show/hide
Query:  FFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQFHD
        FF+ L+ EDV WRA WMSTKPMMY+CGKF +L L+GPW C++YAPLMVL QIWVRQFIP TH+LR+SEFAY+  FCKNK+Q++V+AWK   +I+SG +HD
Subjt:  FFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQFHD

Query:  DTSDTYKMWHSDRAKIMV
        +  + Y+ WHS R K +V
Subjt:  DTSDTYKMWHSDRAKIMV

A0A6J1DB13 uncharacterized protein LOC1110188205.1e-4163.56Show/hide
Query:  FFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQFHD
        FF+ L++EDV WRA WMSTKPMMY+CGKF +LPL+GP  C++YAPLMVL QIWVRQFIP TH+LR+SEFAY+ +FCKNK+Q++V+AWK   +I+SG +HD
Subjt:  FFSKLKNEDVVWRAPWMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQFHD

Query:  DTSDTYKMWHSDRAKIMV
        +  + Y+ WHS R K +V
Subjt:  DTSDTYKMWHSDRAKIMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTAACGATATTTCAACGGTTTAGAATAACCTTCACCGAGGGACTCAAAGATCAGGATCAAAATGCTCCCGAAATTGGAAAGACAAGAATGAAAACGAACCTGAG
AGACCCTATCTATTTTTGGAAAGAAACACGAAAAATGTTTATCAATTACAAACTACGAATTTTAGTTTGTTTTAAAATTCCTTTAATTTGGCATGCCTATCCTATATTGT
TATATGTATATTGGTTGTATGTTTATTTGCGCATGAAATTCTCCACTCAAGCTAGCCACGTTGATTTTTTTTCCAAATTAAAGAATGAAGATGTTGTATGGAGAGCTCCT
TGGATGTCTACCAAACCTATGATGTATAAATGCGGTAAATTCCAAAATCTACCTCTCGTAGGTCCATGGAGATGTATAACTTATGCTCCTTTGATGGTATTACCCCAAAT
TTGGGTACGGCAATTCATCCCTACTACACATGAGCTGAGAGATTCAGAATTTGCATACAATGAAAAGTTTTGTAAAAACAAAGTCCAGCAGATTGTGCAAGCGTGGAAAG
AAACCACTAAAATCAAAAGTGGGCAATTTCATGATGATACGTCAGATACATACAAAATGTGGCATTCGGATAGAGCCAAGATCATGGTCACATCATCAATCATCAAAGTC
AAGGTAGAAGTGAGACCAGATCAAATGAAACAAGGATGGTTGCATAATGCCCAACTAGAAAAAGAATTGAATCAGATAATAGGCAGTGTAAGCAAACAAGGAAAATTAGA
AAAGGAGATATTAACATTAGATACGAAGGCTCGCGACCTGAATAGAAGGATGCATCGATTGAGAAGAGATAAAGAGATTTCAGAAGCAACGCTTAAATCACAACAATTTG
AGATCACCACACTCTGTGAGCAAGCAAAAAGGTTGGAGGAAGACATTGATTCAAGAAATAAAGAAATTACTAAGATAAGGGAGGAAAATGTAACGTTGCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTAACGATATTTCAACGGTTTAGAATAACCTTCACCGAGGGACTCAAAGATCAGGATCAAAATGCTCCCGAAATTGGAAAGACAAGAATGAAAACGAACCTGAG
AGACCCTATCTATTTTTGGAAAGAAACACGAAAAATGTTTATCAATTACAAACTACGAATTTTAGTTTGTTTTAAAATTCCTTTAATTTGGCATGCCTATCCTATATTGT
TATATGTATATTGGTTGTATGTTTATTTGCGCATGAAATTCTCCACTCAAGCTAGCCACGTTGATTTTTTTTCCAAATTAAAGAATGAAGATGTTGTATGGAGAGCTCCT
TGGATGTCTACCAAACCTATGATGTATAAATGCGGTAAATTCCAAAATCTACCTCTCGTAGGTCCATGGAGATGTATAACTTATGCTCCTTTGATGGTATTACCCCAAAT
TTGGGTACGGCAATTCATCCCTACTACACATGAGCTGAGAGATTCAGAATTTGCATACAATGAAAAGTTTTGTAAAAACAAAGTCCAGCAGATTGTGCAAGCGTGGAAAG
AAACCACTAAAATCAAAAGTGGGCAATTTCATGATGATACGTCAGATACATACAAAATGTGGCATTCGGATAGAGCCAAGATCATGGTCACATCATCAATCATCAAAGTC
AAGGTAGAAGTGAGACCAGATCAAATGAAACAAGGATGGTTGCATAATGCCCAACTAGAAAAAGAATTGAATCAGATAATAGGCAGTGTAAGCAAACAAGGAAAATTAGA
AAAGGAGATATTAACATTAGATACGAAGGCTCGCGACCTGAATAGAAGGATGCATCGATTGAGAAGAGATAAAGAGATTTCAGAAGCAACGCTTAAATCACAACAATTTG
AGATCACCACACTCTGTGAGCAAGCAAAAAGGTTGGAGGAAGACATTGATTCAAGAAATAAAGAAATTACTAAGATAAGGGAGGAAAATGTAACGTTGCGATAG
Protein sequenceShow/hide protein sequence
MFVTIFQRFRITFTEGLKDQDQNAPEIGKTRMKTNLRDPIYFWKETRKMFINYKLRILVCFKIPLIWHAYPILLYVYWLYVYLRMKFSTQASHVDFFSKLKNEDVVWRAP
WMSTKPMMYKCGKFQNLPLVGPWRCITYAPLMVLPQIWVRQFIPTTHELRDSEFAYNEKFCKNKVQQIVQAWKETTKIKSGQFHDDTSDTYKMWHSDRAKIMVTSSIIKV
KVEVRPDQMKQGWLHNAQLEKELNQIIGSVSKQGKLEKEILTLDTKARDLNRRMHRLRRDKEISEATLKSQQFEITTLCEQAKRLEEDIDSRNKEITKIREENVTLR