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Tan0006685 (gene) of Snake gourd v1 genome

Gene IDTan0006685
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG02:82359868..82360443
RNA-Seq ExpressionTan0006685
SyntenyTan0006685
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060930.1 hypothetical protein E6C27_scaffold501G00630 [Cucumis melo var. makuwa]6.7e-1868.35Show/hide
Query:  MKRSCVGVFAVMILLAMVFVHVDCRPLRSMENTLPVTQIGQ-EKVAGGYRTGFVTFGVNRKGRWAFKHASGPSKRGPGH
        MK S  GVFAVMILLAMVFVHVDCR LRS   TLP    G+ EKV  G  +G V+F  +RKG WAFKHASGPS RGPGH
Subjt:  MKRSCVGVFAVMILLAMVFVHVDCRPLRSMENTLPVTQIGQ-EKVAGGYRTGFVTFGVNRKGRWAFKHASGPSKRGPGH

KAE8652069.1 hypothetical protein Csa_018550 [Cucumis sativus]9.6e-1765.82Show/hide
Query:  MKRSCVGVFAVMILLAMVFVHVDCRPLRSMENTLPVTQIGQ-EKVAGGYRTGFVTFGVNRKGRWAFKHASGPSKRGPGH
        MK    GVFAVM LLAMVFVHVDCR LRS   TLP    G+ EKV  G   G V+F  +RKG WAFKHASGPS RGPGH
Subjt:  MKRSCVGVFAVMILLAMVFVHVDCRPLRSMENTLPVTQIGQ-EKVAGGYRTGFVTFGVNRKGRWAFKHASGPSKRGPGH

KAG6585686.1 hypothetical protein SDJN03_18419, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2071.79Show/hide
Query:  MKRSCVGVFAVMILLAMVFVHVDCRPLRSMENTLPVTQIGQEKVAGGYRTGFVTFGVNRKGRWAFKHASGPSKRGPGH
        MKR CVGV AVMILLAMVFVHVDCR L SM +T  V   G+E V  G  T FV FG  RKGRWAFKH SGPSKRGPGH
Subjt:  MKRSCVGVFAVMILLAMVFVHVDCRPLRSMENTLPVTQIGQEKVAGGYRTGFVTFGVNRKGRWAFKHASGPSKRGPGH

TrEMBL top hitse value%identityAlignment
A0A0A0LKP9 Uncharacterized protein4.7e-1765.82Show/hide
Query:  MKRSCVGVFAVMILLAMVFVHVDCRPLRSMENTLPVTQIGQ-EKVAGGYRTGFVTFGVNRKGRWAFKHASGPSKRGPGH
        MK    GVFAVM LLAMVFVHVDCR LRS   TLP    G+ EKV  G   G V+F  +RKG WAFKHASGPS RGPGH
Subjt:  MKRSCVGVFAVMILLAMVFVHVDCRPLRSMENTLPVTQIGQ-EKVAGGYRTGFVTFGVNRKGRWAFKHASGPSKRGPGH

A0A5A7V0S4 Uncharacterized protein3.2e-1868.35Show/hide
Query:  MKRSCVGVFAVMILLAMVFVHVDCRPLRSMENTLPVTQIGQ-EKVAGGYRTGFVTFGVNRKGRWAFKHASGPSKRGPGH
        MK S  GVFAVMILLAMVFVHVDCR LRS   TLP    G+ EKV  G  +G V+F  +RKG WAFKHASGPS RGPGH
Subjt:  MKRSCVGVFAVMILLAMVFVHVDCRPLRSMENTLPVTQIGQ-EKVAGGYRTGFVTFGVNRKGRWAFKHASGPSKRGPGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCGTTCTTGTGTTGGAGTTTTTGCAGTGATGATACTGTTGGCAATGGTGTTTGTTCATGTGGATTGCAGGCCGCTCAGATCGATGGAGAATACTTTGCCCGTGAC
GCAAATCGGGCAGGAGAAAGTCGCTGGTGGTTACCGGACTGGGTTCGTTACCTTCGGCGTTAACCGGAAGGGAAGATGGGCATTCAAGCATGCTTCTGGGCCGAGCAAAA
GAGGACCAGGTCACTAG
mRNA sequenceShow/hide mRNA sequence
CACCGTCCTTGCCGATTTGTTTCGTGTTTGTGTACATAAAAGGGCAACTTCCCAGGTCCCTTTTAGAGAGTTTTGTGGAGAAGATTAACATATTTGGTAGATTCAAAAGC
AAGGATGAAGCGTTCTTGTGTTGGAGTTTTTGCAGTGATGATACTGTTGGCAATGGTGTTTGTTCATGTGGATTGCAGGCCGCTCAGATCGATGGAGAATACTTTGCCCG
TGACGCAAATCGGGCAGGAGAAAGTCGCTGGTGGTTACCGGACTGGGTTCGTTACCTTCGGCGTTAACCGGAAGGGAAGATGGGCATTCAAGCATGCTTCTGGGCCGAGC
AAAAGAGGACCAGGTCACTAGCTGAAGACATGATTGAAAAAAACTTCTGACCATTCTTCATTTGTTATTGTTGTATGAATTTGTGACATTTGGTTTGTACAAGGGTTGTT
TTTCTTTCTTCCTTTTTTCCCCTCAACAAATGGGTTGTACACTTCACAATTTTAGAGAGATCAGACATTAATTAGAAGTTTGGTCTCTGCCTATGCCAATAGTAAGAGTA
ACACAGGGAGTAGAGTTAAAGTTAGT
Protein sequenceShow/hide protein sequence
MKRSCVGVFAVMILLAMVFVHVDCRPLRSMENTLPVTQIGQEKVAGGYRTGFVTFGVNRKGRWAFKHASGPSKRGPGH