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Tan0006686 (gene) of Snake gourd v1 genome

Gene IDTan0006686
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionVQ domain-containing protein
Genome locationLG03:79958637..79959224
RNA-Seq ExpressionTan0006686
SyntenyTan0006686
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039608 - VQ motif-containing protein 1/10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026461.1 hypothetical protein SDJN02_10461, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-2362.73Show/hide
Query:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAVDGGGETRKRRRVE-----------EISTEICRNST------TSFKDLD-RLLKLDLPS
        MANS +A P+KVV IEYHHI TDV+NFKSVVQTLTGM+STA   GG TRK+RRV+           E STE C   T      TS++DLD  LLKL+LPS
Subjt:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAVDGGGETRKRRRVE-----------EISTEICRNST------TSFKDLD-RLLKLDLPS

Query:  MEDLNWIWAD
        MEDLNWIWAD
Subjt:  MEDLNWIWAD

KAG7034723.1 hypothetical protein SDJN02_04453, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-2264.65Show/hide
Query:  MANSNS--AVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAVDGGGET-RKRRRVEEISTEICRNS----TTSFKDLDRLLKLDLPSMEDLNWIWAD
        MA+S +  A  +KVVLIEYHH+HTDVS+FKSVVQTLTG HS+AV+GGG T RKR RVE   + + R +    +TSFKDLDR L L LP++EDLNWIWAD
Subjt:  MANSNS--AVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAVDGGGET-RKRRRVEEISTEICRNS----TTSFKDLDRLLKLDLPSMEDLNWIWAD

XP_022926399.1 VQ motif-containing protein 10-like [Cucurbita moschata]1.6e-2363.64Show/hide
Query:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAVDGGGETRKRRRVE-----------EISTEICRNST------TSFKDLD-RLLKLDLPS
        MANS +A P+KVV IEYHHI TDV+NFKSVVQTLTGM+STA   GG TRK+RRV+           E STE C   T      TSF+DLD  LLKL+LPS
Subjt:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAVDGGGETRKRRRVE-----------EISTEICRNST------TSFKDLD-RLLKLDLPS

Query:  MEDLNWIWAD
        MEDLNWIWAD
Subjt:  MEDLNWIWAD

XP_023003955.1 VQ motif-containing protein 10 [Cucurbita maxima]3.1e-2262.73Show/hide
Query:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAVDGGGETRKRRRVE-----------EISTEICRNST------TSFKDLD-RLLKLDLPS
        MANS +A P+KVV IEYHHI TDVSNFKSVVQTLTGM+STA   GG TRK+ RV+           E ST  C   T      TSF+DLD  LLKL+LPS
Subjt:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAVDGGGETRKRRRVE-----------EISTEICRNST------TSFKDLD-RLLKLDLPS

Query:  MEDLNWIWAD
        MEDLNWIWAD
Subjt:  MEDLNWIWAD

XP_023518171.1 VQ motif-containing protein 10-like [Cucurbita pepo subsp. pepo]3.6e-2363.64Show/hide
Query:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAVDGGGETRKRRRVE-----------EISTEICRNST------TSFKDLD-RLLKLDLPS
        MANS +A P+KVV IEYHHI TDVSNFKSVVQTLTGM+S A   GG TRK+RRV+           E STE C   T      TSF+DLD  LLKL+LPS
Subjt:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAVDGGGETRKRRRVE-----------EISTEICRNST------TSFKDLD-RLLKLDLPS

Query:  MEDLNWIWAD
        MEDLNWIWAD
Subjt:  MEDLNWIWAD

TrEMBL top hitse value%identityAlignment
A0A0A0KNW8 VQ domain-containing protein7.7e-1956.73Show/hide
Query:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAV--DGGGETRKRRRV----------EEISTEICRNSTTSFKDLDRLLKLDLPSMEDLNW
        M NS     ++VVLIEYHHI TD SNFKSVVQ+LTG HS A   DGG   RKR+RV            I+  +    T SFKDLDRLL L+LPSMEDLNW
Subjt:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAV--DGGGETRKRRRV----------EEISTEICRNSTTSFKDLDRLLKLDLPSMEDLNW

Query:  IWAD
        I  D
Subjt:  IWAD

A0A5D3CN21 VQ motif-containing protein 1-like1.7e-1856.86Show/hide
Query:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMH-STAVDGGGETRKRRRVE---------EISTEICRNSTTSFKDLDRLLKLDLPSMEDLNWIW
        M N      ++VVLIEYHHI TD SNFKSVVQ+LTG H STA DGG   RKR+RV           I+  +    T SFKDLDRLL L+LPSMEDL+WI 
Subjt:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMH-STAVDGGGETRKRRRVE---------EISTEICRNSTTSFKDLDRLLKLDLPSMEDLNWIW

Query:  AD
         D
Subjt:  AD

A0A6J1CYB0 uncharacterized protein LOC1110157001.0e-1550.94Show/hide
Query:  AVPLKVVLIEYHHIHTDVSNFKSVVQTLTG--------MHSTAVDGGGETRKRRR----VEEISTEICRNSTT--------SFKDLDRLLKLDLPSMEDL
        + P+KVVLIEYHH+ TDVSNFKSVVQ+LTG        +  T+   G  T++RRR         T I   +TT        SFKDLDRLLK +LPS++DL
Subjt:  AVPLKVVLIEYHHIHTDVSNFKSVVQTLTG--------MHSTAVDGGGETRKRRR----VEEISTEICRNSTT--------SFKDLDRLLKLDLPSMEDL

Query:  NWIWAD
        +WIWAD
Subjt:  NWIWAD

A0A6J1EF02 VQ motif-containing protein 10-like7.9e-2463.64Show/hide
Query:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAVDGGGETRKRRRVE-----------EISTEICRNST------TSFKDLD-RLLKLDLPS
        MANS +A P+KVV IEYHHI TDV+NFKSVVQTLTGM+STA   GG TRK+RRV+           E STE C   T      TSF+DLD  LLKL+LPS
Subjt:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAVDGGGETRKRRRVE-----------EISTEICRNST------TSFKDLD-RLLKLDLPS

Query:  MEDLNWIWAD
        MEDLNWIWAD
Subjt:  MEDLNWIWAD

A0A6J1KT83 VQ motif-containing protein 101.5e-2262.73Show/hide
Query:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAVDGGGETRKRRRVE-----------EISTEICRNST------TSFKDLD-RLLKLDLPS
        MANS +A P+KVV IEYHHI TDVSNFKSVVQTLTGM+STA   GG TRK+ RV+           E ST  C   T      TSF+DLD  LLKL+LPS
Subjt:  MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAVDGGGETRKRRRVE-----------EISTEICRNST------TSFKDLD-RLLKLDLPS

Query:  MEDLNWIWAD
        MEDLNWIWAD
Subjt:  MEDLNWIWAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACTCGAATTCGGCGGTCCCATTGAAGGTGGTGTTGATTGAGTACCACCATATTCATACTGATGTGTCCAATTTCAAGTCCGTCGTTCAGACCCTCACCGGCAT
GCACTCCACCGCCGTCGACGGTGGCGGAGAGACCAGAAAGAGGCGGCGGGTGGAAGAAATTAGTACTGAAATTTGCAGGAATTCCACGACGTCGTTTAAGGACTTGGATC
GCTTGCTCAAGCTCGACCTTCCTTCTATGGAGGATCTCAACTGGATTTGGGCTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATTATTTCGTATCATCAAAAAAAAAATATATATGGCGAACTCGAATTCGGCGGTCCCATTGAAGGTGGTGTTGATTGAGTACCACCATATTCATACTGATGTGTCCAATT
TCAAGTCCGTCGTTCAGACCCTCACCGGCATGCACTCCACCGCCGTCGACGGTGGCGGAGAGACCAGAAAGAGGCGGCGGGTGGAAGAAATTAGTACTGAAATTTGCAGG
AATTCCACGACGTCGTTTAAGGACTTGGATCGCTTGCTCAAGCTCGACCTTCCTTCTATGGAGGATCTCAACTGGATTTGGGCTGATTAAATACATAGATTTACTTATAT
ATTATTTTTCTTTCCCTAAGGCCTTCTAATATTCTTGAATTTAATTTTTTTGGGTCACACTACCCGTTGGTAATTATTATTAATTTATTATTTTTCAGTATTATTCTGGA
TATATTGTTTTAAGCTCTCTATTTGTTAACTTGGAGAACACATTCTACTTCTAGTAAAACTATTTACTAGAAAATTAAGACAATGTTTCAAAAAATTGTGATTCAGAAAA
TTAAATTAAAATAAAATGGACGTTTTGAATGTAAGAAA
Protein sequenceShow/hide protein sequence
MANSNSAVPLKVVLIEYHHIHTDVSNFKSVVQTLTGMHSTAVDGGGETRKRRRVEEISTEICRNSTTSFKDLDRLLKLDLPSMEDLNWIWAD