; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0006707 (gene) of Snake gourd v1 genome

Gene IDTan0006707
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLate embryogenesis abundant protein
Genome locationLG03:72448535..72448908
RNA-Seq ExpressionTan0006707
SyntenyTan0006707
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594997.1 hypothetical protein SDJN03_11550, partial [Cucurbita argyrosperma subsp. sororia]9.5e-2979.55Show/hide
Query:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGDAASSLINRQGVP
        MDKR+ADQL+RQQPERKS  +EER + IPLE+SPYVNYKDLEDYKNQAYG QGHL+PKP R  GGG TD PTLSGDA SS+INRQGVP
Subjt:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGDAASSLINRQGVP

XP_022962656.1 uncharacterized protein LOC111463078 [Cucurbita moschata]5.2e-2777.27Show/hide
Query:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGDAASSLINRQGVP
        MDKR+ADQ +RQQPERKS  +EER + IPLE+SPYVNYKDLEDYKNQAYG QGHL+ KP R  GGG TD PTLSGDA SS+INRQGVP
Subjt:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGDAASSLINRQGVP

XP_023003117.1 uncharacterized protein LOC111496824 [Cucurbita maxima]1.2e-2880.9Show/hide
Query:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGR-GSGGGPTDGPTLSGDAASSLINRQGVP
        MDKR+ADQ +RQQPERKSE KEER + IPLE+SPYVNYKDLEDYKNQAYG QGHL+PKP R G GGG TD PTLSGDA SS+INRQGVP
Subjt:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGR-GSGGGPTDGPTLSGDAASSLINRQGVP

XP_023518886.1 uncharacterized protein LOC111782271 [Cucurbita pepo subsp. pepo]7.2e-2979.55Show/hide
Query:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGDAASSLINRQGVP
        MDKR+ADQ +RQQPERKS  +EER + IPLE+SPYVNYKDLEDYKNQAYG QGHL+PKP RG GGG TD PTLSGDA SS+INRQGVP
Subjt:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGDAASSLINRQGVP

XP_038883215.1 uncharacterized protein LOC120074234 [Benincasa hispida]5.9e-3185.39Show/hide
Query:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGD-AASSLINRQGVP
        MDKR+ DQLQRQQ ERKS R+EERS+ IPLESSPYVNYKDLEDYK+QAYG QGHLQPKPGRG GGGPTD PTLSGD AASS+INRQGVP
Subjt:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGD-AASSLINRQGVP

TrEMBL top hitse value%identityAlignment
A0A0A0KGG1 Uncharacterized protein1.5e-2479.01Show/hide
Query:  MDKRDADQLQRQQPE-RKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGDAASS
        M+KR+ADQ Q Q  E RKSER++ERS++IPLESSPYVNY+DLEDYKNQAYG QGHLQPKPGRG GGGPTD PTLSGDAA++
Subjt:  MDKRDADQLQRQQPE-RKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGDAASS

A0A1S4DTA9 uncharacterized protein LOC1079904494.3e-2778.89Show/hide
Query:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGR-GSGGGPTDGPTLSGD-AASSLINRQGVP
        M+KR+ADQ Q Q  ERKSER++ERS+ +PLESSPYVNYKDLEDYK+QAYG QGHLQPKPGR G GGGPTD PTLSGD AASS+ NRQGVP
Subjt:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGR-GSGGGPTDGPTLSGD-AASSLINRQGVP

A0A5D3CLL7 Late embryogenesis abundant protein, LEA-184.7e-2677.78Show/hide
Query:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGR-GSGGGPTDGPTLSGD-AASSLINRQGVP
        M+KR ADQ Q Q  E KSER++ERS+ +PLESSPYVNYKDLEDYK+QAYG QGHLQPKPGR G GGGPTD PTLSGD AASS+ NRQGVP
Subjt:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGR-GSGGGPTDGPTLSGD-AASSLINRQGVP

A0A6J1HDU8 uncharacterized protein LOC1114630782.5e-2777.27Show/hide
Query:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGDAASSLINRQGVP
        MDKR+ADQ +RQQPERKS  +EER + IPLE+SPYVNYKDLEDYKNQAYG QGHL+ KP R  GGG TD PTLSGDA SS+INRQGVP
Subjt:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGDAASSLINRQGVP

A0A6J1KLI9 uncharacterized protein LOC1114968246.0e-2980.9Show/hide
Query:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGR-GSGGGPTDGPTLSGDAASSLINRQGVP
        MDKR+ADQ +RQQPERKSE KEER + IPLE+SPYVNYKDLEDYKNQAYG QGHL+PKP R G GGG TD PTLSGDA SS+INRQGVP
Subjt:  MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGR-GSGGGPTDGPTLSGDAASSLINRQGVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 64.3e-1142.86Show/hide
Query:  QRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGD------------AASSLINRQGVP
        Q++ P  + E KE ++DD+    +PY++Y +LEDYK + YG QGH +PK   G GGG TD PT SG             +++  INRQGVP
Subjt:  QRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGD------------AASSLINRQGVP

AT2G23110.2 Late embryogenesis abundant protein, group 64.3e-1142.86Show/hide
Query:  QRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGD------------AASSLINRQGVP
        Q++ P  + E KE ++DD+    +PY++Y +LEDYK + YG QGH +PK   G GGG TD PT SG             +++  INRQGVP
Subjt:  QRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGD------------AASSLINRQGVP

AT2G23120.1 Late embryogenesis abundant protein, group 62.2e-0748.48Show/hide
Query:  ERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGDAASS
        E+K+E  + + +D+P + SPY+    LEDYK +AYG +GH +P P  G GGG TD PT SGDA ++
Subjt:  ERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGDAASS

AT2G33690.1 Late embryogenesis abundant protein, group 63.5e-1357.14Show/hide
Query:  KEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGDAASSLIN
        K E   ++PLE+SPY  Y+D+EDYK  AYG  GH   KPG   GGG TD PT SGDAA S I+
Subjt:  KEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGDAASSLIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGCGCGACGCCGATCAGCTGCAACGACAACAACCGGAGAGGAAGAGCGAAAGGAAAGAGGAGAGATCAGATGACATTCCGTTGGAGAGCAGTCCGTACGTGAA
TTACAAGGACTTGGAAGATTACAAAAACCAAGCCTACGGTGTCCAAGGTCATCTCCAGCCCAAGCCCGGCCGTGGCAGCGGCGGTGGCCCCACCGATGGCCCTACTCTCT
CCGGCGATGCTGCTTCTTCGTTGATCAACCGCCAAGGAGTGCCCTGA
mRNA sequenceShow/hide mRNA sequence
AAGATTAAGCTCATTGGAAAATGGATAAGCGCGACGCCGATCAGCTGCAACGACAACAACCGGAGAGGAAGAGCGAAAGGAAAGAGGAGAGATCAGATGACATTCCGTTG
GAGAGCAGTCCGTACGTGAATTACAAGGACTTGGAAGATTACAAAAACCAAGCCTACGGTGTCCAAGGTCATCTCCAGCCCAAGCCCGGCCGTGGCAGCGGCGGTGGCCC
CACCGATGGCCCTACTCTCTCCGGCGATGCTGCTTCTTCGTTGATCAACCGCCAAGGAGTGCCCTGACAAGAGAAGACACGGCGATGGCGACACGCCAACCATCATTTCT
TTTCCTGTTTATTAATTTATTTTCCTTTTTATTTTCGTCACGCG
Protein sequenceShow/hide protein sequence
MDKRDADQLQRQQPERKSERKEERSDDIPLESSPYVNYKDLEDYKNQAYGVQGHLQPKPGRGSGGGPTDGPTLSGDAASSLINRQGVP