; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0006712 (gene) of Snake gourd v1 genome

Gene IDTan0006712
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPectinesterase
Genome locationLG05:68002612..68003645
RNA-Seq ExpressionTan0006712
SyntenyTan0006712
Gene Ontology termsGO:0042545 - cell wall modification (biological process)
GO:0030599 - pectinesterase activity (molecular function)
InterPro domainsIPR000070 - Pectinesterase, catalytic
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584281.1 putative pectinesterase/pectinesterase inhibitor 39, partial [Cucurbita argyrosperma subsp. sororia]3.9e-2731.29Show/hide
Query:  ASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF-------------------------------------
        A+APNNS SRF IHV+PG+Y E++++ES K FI L GDDA+TT IV NRS  T FGT  SATF                                     
Subjt:  ASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF-------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------DSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
                       DS+VN AGWS WS    L LLFYAE+ NRGPG+NLS RVK  GFH I N  EA +F+V+ FI+G TWLPETG+P+ PDL
Subjt:  ---------------DSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

KAG6584282.1 putative pectinesterase/pectinesterase inhibitor 39, partial [Cucurbita argyrosperma subsp. sororia]5.2e-2731.29Show/hide
Query:  ASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF-------------------------------------
        A+APNNS SRF IHV+PG+Y E++ +ES K FI L GDDA+TT IV NRS  T FGT  SATF                                     
Subjt:  ASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF-------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------DSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
                       DS+VN AGWS WS    L LLFYAE+ NRGPG+NLS RVK  GFH I N  EA +F+V+ FI+G TWLPETG+P+ PDL
Subjt:  ---------------DSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

KAG6584284.1 putative pectinesterase/pectinesterase inhibitor 42, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3240Show/hide
Query:  ASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF-------------------------------------
        A+APNNS SRF IHV+PG+Y E++++ES K FI L GDD +TT IV NRS  T FGT  SATF                                     
Subjt:  ASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF-------------------------------------

Query:  ---------------------------------------------DSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIK
                                                     DS+VN AGWS W     L LLFYAE+ NRG G+NLS RVK SGFH I N  EA +
Subjt:  ---------------------------------------------DSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIK

Query:  FTVKIFIHGMTWLP-ETGIPFTPDL
        F+V+ FI+G TWLP ETG+P+ PDL
Subjt:  FTVKIFIHGMTWLP-ETGIPFTPDL

KAG7019877.1 putative pectinesterase/pectinesterase inhibitor 39, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-2731.29Show/hide
Query:  ASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF-------------------------------------
        A+APNNS SRF IHV+PG+Y E++++ES K FI L GDDA+TT IV NRS  T FGT  SATF                                     
Subjt:  ASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF-------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------DSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
                       DS+VN AGWS WS    L LLFYAE++NRGPG+NLS RVK  GFH I N  EA +F+V+ FI+G TWLPETG+P+ PDL
Subjt:  ---------------DSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

XP_022137308.1 probable pectinesterase/pectinesterase inhibitor 39 [Momordica charantia]9.7e-3435.82Show/hide
Query:  ASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF-------------------------------------
        A+AP+NS +RFYIHV  G Y EHVE+ S K F+ALIGDDA+TTIIVDNRSN   F TF SATF                                     
Subjt:  ASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF-------------------------------------

Query:  -----------------------------------------------------------------------------------------DSIVNTAGWSA
                                                                                                 D++VN  GW  
Subjt:  -----------------------------------------------------------------------------------------DSIVNTAGWSA

Query:  WSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
        WS G PLNLLFYAEFNNRGPG+++S+R+K  G+H+INNP EA K+TVK FI G TWLPET +PF P L
Subjt:  WSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

TrEMBL top hitse value%identityAlignment
A0A314Y6C2 Pectinesterase9.8e-2435.83Show/hide
Query:  ASAPNNSKSR---FYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRS------------------------------------------NGTDF
        A+APNNS S    F I+V  G+Y+E+V +   K ++ ++GD    TI+  NRS                                          NG D 
Subjt:  ASAPNNSKSR---FYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRS------------------------------------------NGTDF

Query:  GTFQSATFDSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
         TF S +F+++V+ AGW AW     L+ L+YAE+NN GPGSN + RV   G+H+I N  +A  FTV  F+ G  WLP+TG+P+T  L
Subjt:  GTFQSATFDSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

A0A6J1C9Z6 Pectinesterase4.7e-3435.82Show/hide
Query:  ASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF-------------------------------------
        A+AP+NS +RFYIHV  G Y EHVE+ S K F+ALIGDDA+TTIIVDNRSN   F TF SATF                                     
Subjt:  ASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF-------------------------------------

Query:  -----------------------------------------------------------------------------------------DSIVNTAGWSA
                                                                                                 D++VN  GW  
Subjt:  -----------------------------------------------------------------------------------------DSIVNTAGWSA

Query:  WSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
        WS G PLNLLFYAEFNNRGPG+++S+R+K  G+H+INNP EA K+TVK FI G TWLPET +PF P L
Subjt:  WSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

A0A6J1D381 Pectinesterase2.0e-2429.79Show/hide
Query:  MHEFHCTASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF------------------------------
        +H     A+APNN   RFYIHV+PGIYKEH+EV   K FI+LIGDDA+TT+IVD+RSN   F T  SATF                              
Subjt:  MHEFHCTASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------DSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPF
                         D IV   GWS W P  P+ LLFYAE+NN G G++ S+RVK  G+H+++N +EA +FTV+IFI G+ WL ETGIPF
Subjt:  -----------------DSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPF

A0A6J1DAG5 Pectinesterase5.6e-2731.62Show/hide
Query:  ASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSAT--------------------------------------
        A+APN S +RFYIHV+PGIYKEHVEV  QK FIALIG+DA+TTIIVDNRSNG+ F T  +AT                                      
Subjt:  ASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSAT--------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------FDSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
                    D +V   GW  W PGRP+NLLFYAE+NNRGPG++ S+RV   G+H+++N  E  KFTV+ FI+G  WLPETGIPF   L
Subjt:  -----------FDSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

A0A6J1DCN7 Pectinesterase1.7e-2329.55Show/hide
Query:  TASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSAT-------------------------------------
        TA+APN   +RFYIH++PGIYKEHVEV  QK FIALIGDDA+TTIIVDNRSNG+ F T  +AT                                     
Subjt:  TASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSAT-------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------FDSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
                    D++V   GW  W PG P+NLLFYAE+ N GPG++  +RV   G+H++ N  +  KFTV+ FI    WLPETGIPF   L
Subjt:  -----------FDSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

SwissProt top hitse value%identityAlignment
O04887 Pectinesterase 25.9e-1849.37Show/hide
Query:  DSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
        DS++N AGW  WS    LN L+YAE+ N GPGS+ + RVK  G+H++ +P++  +FTV  FI G +WLP T +PFT  L
Subjt:  DSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

Q9FHN4 Probable pectinesterase/pectinesterase inhibitor 604.7e-1546.91Show/hide
Query:  DSIVNTAGWSAWSPGRP--LNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
        DS+V+  GWS W+ G    L+ LFYAE+ N GP S+   RV+  GFH+++  ++A  F+V  FI G  WLP +GIPFT +L
Subjt:  DSIVNTAGWSAWSPGRP--LNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

Q9FHN5 Probable pectinesterase/pectinesterase inhibitor 596.1e-1548.15Show/hide
Query:  DSIVNTAGWSAWSPGR--PLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
        D++V+  GWS W  G    L+ LFYAE+ N GP S+   RV   GFH++   ++A  FTV  FI G  WLP TGIPFT  L
Subjt:  DSIVNTAGWSAWSPGR--PLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

Q9SKX2 Probable pectinesterase/pectinesterase inhibitor 163.6e-1552.63Show/hide
Query:  VNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
        ++ +GWS WS G  L  LFY E+ N GPGS++S RVK SG H      EA KFTV  FI G  WLP TG+ F P L
Subjt:  VNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

Q9SMY7 Probable pectinesterase/pectinesterase inhibitor 441.6e-1549.35Show/hide
Query:  IVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
        +V   GW  W+    L+ LFY EF N GPGS LS RVK  G+H+ NN ++A  FTV  FI G  WLP TG+ F+  L
Subjt:  IVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

Q9SMY7 Probable pectinesterase/pectinesterase inhibitor 443.1e-0642.62Show/hide
Query:  APNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF
        AP+ S +RF I+++ G+Y E+VE++ +K  I ++GD    T+I  NRS    + TF+SATF
Subjt:  APNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF

Arabidopsis top hitse value%identityAlignment
AT2G43050.1 Plant invertase/pectin methylesterase inhibitor superfamily2.6e-1652.63Show/hide
Query:  VNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
        ++ +GWS WS G  L  LFY E+ N GPGS++S RVK SG H      EA KFTV  FI G  WLP TG+ F P L
Subjt:  VNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

AT3G43270.1 Plant invertase/pectin methylesterase inhibitor superfamily2.2e-1542.35Show/hide
Query:  FQSATFDSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
        F        +N  GW  W+    L+ L+Y E+ N GPG++L RRVK  G+H++N   EA  FTV   I G  WLP TGI F   L
Subjt:  FQSATFDSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

AT3G43270.1 Plant invertase/pectin methylesterase inhibitor superfamily5.7e-0843.55Show/hide
Query:  SAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF
        +AP+ S  R+ IHV+ G+Y E+VE++ +K  I ++GD    T+I  NRS    + TF+SATF
Subjt:  SAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF

AT4G33220.1 pectin methylesterase 441.1e-1649.35Show/hide
Query:  IVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
        +V   GW  W+    L+ LFY EF N GPGS LS RVK  G+H+ NN ++A  FTV  FI G  WLP TG+ F+  L
Subjt:  IVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

AT4G33220.1 pectin methylesterase 442.2e-0742.62Show/hide
Query:  APNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF
        AP+ S +RF I+++ G+Y E+VE++ +K  I ++GD    T+I  NRS    + TF+SATF
Subjt:  APNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATF

AT5G51490.1 Plant invertase/pectin methylesterase inhibitor superfamily4.4e-1648.15Show/hide
Query:  DSIVNTAGWSAWSPGR--PLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
        D++V+  GWS W  G    L+ LFYAE+ N GP S+   RV   GFH++   ++A  FTV  FI G  WLP TGIPFT  L
Subjt:  DSIVNTAGWSAWSPGR--PLNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL

AT5G51500.1 Plant invertase/pectin methylesterase inhibitor superfamily3.3e-1646.91Show/hide
Query:  DSIVNTAGWSAWSPGRP--LNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL
        DS+V+  GWS W+ G    L+ LFYAE+ N GP S+   RV+  GFH+++  ++A  F+V  FI G  WLP +GIPFT +L
Subjt:  DSIVNTAGWSAWSPGRP--LNLLFYAEFNNRGPGSNLSRRVKRSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGAATTTCACTGTACCGCATCTGCACCAAACAACAGCAAGTCCAGATTCTACATTCACGTGAGACCTGGAATATATAAGGAGCATGTTGAAGTTGAAAGTCAGAA
GATTTTCATAGCACTCATAGGAGATGATGCAACCACTACCATCATTGTTGATAATAGGAGCAATGGCACTGATTTTGGAACCTTCCAATCTGCCACTTTCGATTCTATTG
TCAATACCGCCGGATGGTCAGCATGGTCACCAGGAAGACCTCTAAATTTATTGTTCTATGCAGAGTTCAACAACAGAGGTCCAGGATCAAATTTATCTAGAAGAGTAAAA
CGGTCAGGTTTTCACATAATAAATAATCCAAATGAAGCTATTAAATTTACTGTGAAAATTTTCATTCATGGAATGACATGGTTACCTGAAACTGGTATACCGTTTACACC
GGATTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATGAATTTCACTGTACCGCATCTGCACCAAACAACAGCAAGTCCAGATTCTACATTCACGTGAGACCTGGAATATATAAGGAGCATGTTGAAGTTGAAAGTCAGAA
GATTTTCATAGCACTCATAGGAGATGATGCAACCACTACCATCATTGTTGATAATAGGAGCAATGGCACTGATTTTGGAACCTTCCAATCTGCCACTTTCGATTCTATTG
TCAATACCGCCGGATGGTCAGCATGGTCACCAGGAAGACCTCTAAATTTATTGTTCTATGCAGAGTTCAACAACAGAGGTCCAGGATCAAATTTATCTAGAAGAGTAAAA
CGGTCAGGTTTTCACATAATAAATAATCCAAATGAAGCTATTAAATTTACTGTGAAAATTTTCATTCATGGAATGACATGGTTACCTGAAACTGGTATACCGTTTACACC
GGATTTGTAA
Protein sequenceShow/hide protein sequence
MHEFHCTASAPNNSKSRFYIHVRPGIYKEHVEVESQKIFIALIGDDATTTIIVDNRSNGTDFGTFQSATFDSIVNTAGWSAWSPGRPLNLLFYAEFNNRGPGSNLSRRVK
RSGFHIINNPNEAIKFTVKIFIHGMTWLPETGIPFTPDL