; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0006755 (gene) of Snake gourd v1 genome

Gene IDTan0006755
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG04:53165536..53165958
RNA-Seq ExpressionTan0006755
SyntenyTan0006755
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]6.7e-4574.1Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNG VIDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
        Q  GE N+   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]6.7e-4574.1Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNG VIDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
        Q  GE N+   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]6.7e-4574.1Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNG VIDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
        Q  GE N+   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa]6.7e-4574.1Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNG VIDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
        Q  GE N+   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]6.7e-4574.1Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNG VIDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
        Q  GE N+   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein3.3e-4574.1Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNG VIDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
        Q  GE N+   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
A0A5A7TU93 Gag/pol protein3.3e-4574.1Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNG VIDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
        Q  GE N+   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
A0A5A7TWB9 Gag/pol protein3.3e-4574.1Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNG VIDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
        Q  GE N+   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
A0A5A7V4M1 Gag/pol protein3.3e-4574.1Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNG VIDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
        Q  GE N+   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
A0A5D3CPJ6 Gag/pol protein3.3e-4574.1Show/hide
Query:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFNV EMNG VIDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
        Q  GE N+   +R+F +GS+SGTKS  SSSG KK +KKK
Subjt:  QADGETNLFAHSRRFQKGSSSGTKSCNSSSGLKKTQKKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGACAACCATCTGGACAGATTCGACACGAATCCCTCAAATACGTTTATAACTCTCGTATGAAGGAGGGGTCGTCGGTGAGAGAACACGTTCTTGATCTGATGGT
CCACTTCAACGTGGTTGAGATGAACGGAACGGTCATTGACGAGCAAAGTCAGGTATCGTTCATCCTGGAATCTCTTCCGAAGAGTTTCCTGCAATTTCGCAGCAATGCGG
TGATGAACAAGATAGAGTATAACCTGACTACTCTCCTTAATGAACTACAGACTTTCCAGTCTCTTATGAAGAATAAGGGACAAGCTGATGGAGAGACAAATCTGTTTGCC
CATTCCAGAAGGTTCCAGAAGGGTTCATCCTCTGGGACTAAGTCTTGTAACTCTTCTTCTGGGCTTAAGAAGACCCAAAAGAAGAAAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGACAACCATCTGGACAGATTCGACACGAATCCCTCAAATACGTTTATAACTCTCGTATGAAGGAGGGGTCGTCGGTGAGAGAACACGTTCTTGATCTGATGGT
CCACTTCAACGTGGTTGAGATGAACGGAACGGTCATTGACGAGCAAAGTCAGGTATCGTTCATCCTGGAATCTCTTCCGAAGAGTTTCCTGCAATTTCGCAGCAATGCGG
TGATGAACAAGATAGAGTATAACCTGACTACTCTCCTTAATGAACTACAGACTTTCCAGTCTCTTATGAAGAATAAGGGACAAGCTGATGGAGAGACAAATCTGTTTGCC
CATTCCAGAAGGTTCCAGAAGGGTTCATCCTCTGGGACTAAGTCTTGTAACTCTTCTTCTGGGCTTAAGAAGACCCAAAAGAAGAAAATATGA
Protein sequenceShow/hide protein sequence
MFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVVEMNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGETNLFA
HSRRFQKGSSSGTKSCNSSSGLKKTQKKKI