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Tan0006767 (gene) of Snake gourd v1 genome

Gene IDTan0006767
OrganismTrichosanthes anguina (Snake gourd v1)
Description50S ribosomal protein L33, chloroplastic
Genome locationLG07:72408014..72408213
RNA-Seq ExpressionTan0006767
SyntenyTan0006767
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001705 - Ribosomal protein L33
IPR011332 - Zinc-binding ribosomal protein
IPR038584 - Ribosomal protein L33 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_009004065.1 ribosomal protein L33 [Cucumis hystrix]4.9e-1772.73Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRC               ITQK RHNTPSRL+LRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
YP_009456082.1 ribosomal protein L33 [Momordica charantia]4.9e-1772.73Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRC               ITQK RHNTPSRL+LRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
YP_009752264.1 ribosomal protein L33 [Trichosanthes baviensis]4.9e-1772.73Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRC               ITQK RHNTPSRL+LRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
YP_009752433.1 ribosomal protein L33 [Trichosanthes tricuspidata]4.9e-1772.73Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRC               ITQK RHNTPSRL+LRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
YP_009753895.1 ribosomal protein L33 [Trichosanthes lobata]3.8e-1774.24Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKDARITVILECTRC               ITQK RHNTPSRL+LRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
TrEMBL top hitse value%identityAlignment
A0A1X9Q1M1 50S ribosomal protein L33, chloroplastic2.4e-1772.73Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRC               ITQK RHNTPSRL+LRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
A0A218KG47 50S ribosomal protein L33, chloroplastic2.4e-1772.73Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRC               ITQK RHNTPSRL+LRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
A0A410HFB3 50S ribosomal protein L33, chloroplastic2.4e-1772.73Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRC               ITQK RHNTPSRL+LRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
A0A6H0EV38 50S ribosomal protein L33, chloroplastic1.8e-1774.24Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKDARITVILECTRC               ITQK RHNTPSRL+LRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
G3ETR8 50S ribosomal protein L33, chloroplastic2.4e-1772.73Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRC               ITQK RHNTPSRL+LRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
SwissProt top hitse value%identityAlignment
A4QJM0 50S ribosomal protein L33, chloroplastic6.0e-1866.67Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKD R+T+ILECT C               ITQK RHNTPSRL+LRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
B1A956 50S ribosomal protein L33, chloroplastic2.7e-1868.18Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKDAR+T+ILECT C               ITQK RHNTPSRL+LRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
Q09WZ6 50S ribosomal protein L33, chloroplastic3.5e-1866.67Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKDAR+T+ILECT C               ITQK RHNTPSRL+LRKFCP CYKHTIHGE+KK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
Q2QD68 50S ribosomal protein L33, chloroplastic6.4e-2072.73Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKDAR+TVILECTRC               ITQK RHNTPSRL+LRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
Q49KX8 50S ribosomal protein L33, chloroplastic4.6e-1868.18Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKD R+TVILECT C               ITQK RHNTPSRL+LRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
Arabidopsis top hitse value%identityAlignment
ATCG00640.1 ribosomal protein L335.6e-1966.67Show/hide
Query:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK
        MAKGKD R+T+ILECT C               ITQK RHNTPSRL+LRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARITVILECTRC--------------NITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGGGTAAAGATGCCCGAATAACAGTTATTTTGGAATGTACTCGTTGTAATATTACTCAAAAGAAACGACACAATACGCCTAGTCGATTGAAATTGAGAAAATT
CTGTCCCCGTTGTTACAAACATACGATTCATGGGGAGATAAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGGGTAAAGATGCCCGAATAACAGTTATTTTGGAATGTACTCGTTGTAATATTACTCAAAAGAAACGACACAATACGCCTAGTCGATTGAAATTGAGAAAATT
CTGTCCCCGTTGTTACAAACATACGATTCATGGGGAGATAAAGAAATAG
Protein sequenceShow/hide protein sequence
MAKGKDARITVILECTRCNITQKKRHNTPSRLKLRKFCPRCYKHTIHGEIKK