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Tan0006776 (gene) of Snake gourd v1 genome

Gene IDTan0006776
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionrepetitive proline-rich cell wall protein 3-like
Genome locationLG06:76608058..76608798
RNA-Seq ExpressionTan0006776
SyntenyTan0006776
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
POE15980.1 hypothetical protein BV923_23575 [Pectobacterium odoriferum]5.2e-2069.31Show/hide
Query:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTEGQKLPTTTTTTTTTDTEPASEDEESKFYK----RRPRYRKYPPYKKYPPYKKRPPYKKYPPSS
        M LKYFL+LLLAVVLLTTTQALK+P DSNQEV P+T+ ++LPTTTTT T         DEESKFYK    +RP Y++ PPYKKYPPYKK PPYKKYPPSS
Subjt:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTEGQKLPTTTTTTTTTDTEPASEDEESKFYK----RRPRYRKYPPYKKYPPYKKRPPYKKYPPSS

Query:  N
        +
Subjt:  N

WP_219729224.1 hypothetical protein, partial [Pectobacterium odoriferum]5.2e-2069.31Show/hide
Query:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTEGQKLPTTTTTTTTTDTEPASEDEESKFYK----RRPRYRKYPPYKKYPPYKKRPPYKKYPPSS
        M LKYFL+LLLAVVLLTTTQALK+P DSNQEV P+T+ ++LPTTTTT T         DEESKFYK    +RP Y++ PPYKKYPPYKK PPYKKYPPSS
Subjt:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTEGQKLPTTTTTTTTTDTEPASEDEESKFYK----RRPRYRKYPPYKKYPPYKKRPPYKKYPPSS

Query:  N
        +
Subjt:  N

XP_004147144.2 repetitive proline-rich cell wall protein 3 [Cucumis sativus]1.6e-1663.73Show/hide
Query:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTE--GQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYR---KYPPYKKYPPYKKRPPYKKYPPS
        M LKYFL+LLLAVVLLTTTQALK+P +SNQEV P T+    KLPTT T            +EESKFY+R   Y+   K PPYK+YPPYKKRPPYKKYPPS
Subjt:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTE--GQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYR---KYPPYKKYPPYKKRPPYKKYPPS

Query:  SN
        S+
Subjt:  SN

XP_022930415.1 uncharacterized protein LOC111436870 [Cucurbita moschata]2.2e-2375.26Show/hide
Query:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTEGQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYRKYPPYKKYPPYKKRPPYKKYPPSSN
        M +KYFL+LLLAVVLLTTTQALK+P DS  EV PV+  QKLP    +TT TDTEPASE EESKFY++R  Y+KYPPYK+YPPYKKRPPYKKYPPSSN
Subjt:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTEGQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYRKYPPYKKYPPYKKRPPYKKYPPSSN

XP_023513909.1 repetitive proline-rich cell wall protein 3-like [Cucurbita pepo subsp. pepo]2.0e-2476.29Show/hide
Query:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTEGQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYRKYPPYKKYPPYKKRPPYKKYPPSSN
        M +KYFL+LLLAVVLLTTTQALK+P DS  EV PV+  QKLP    +TT TDTEPASE EESKFY++RP Y+KYPPYK+YPPYKKRPPYKKYPPSSN
Subjt:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTEGQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYRKYPPYKKYPPYKKRPPYKKYPPSSN

TrEMBL top hitse value%identityAlignment
A0A0A0LI79 Uncharacterized protein7.6e-1763.73Show/hide
Query:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTE--GQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYR---KYPPYKKYPPYKKRPPYKKYPPS
        M LKYFL+LLLAVVLLTTTQALK+P +SNQEV P T+    KLPTT T            +EESKFY+R   Y+   K PPYK+YPPYKKRPPYKKYPPS
Subjt:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTE--GQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYR---KYPPYKKYPPYKKRPPYKKYPPS

Query:  SN
        S+
Subjt:  SN

A0A0A0LNP2 Uncharacterized protein1.1e-1562.63Show/hide
Query:  KYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTE--GQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYR---KYPPYKKYPPYKKRPPYKKYPPSSN
        KYFL+LLLAVVLLTTTQALK+P++SNQE  P T+    KLPTT T            +EESKF++R   Y+   K PPYKKYPPYKKRPPYKKYPPSS+
Subjt:  KYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTE--GQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYR---KYPPYKKYPPYKKRPPYKKYPPSSN

A0A5A7VEY7 Repetitive proline-rich cell wall protein 3-like4.1e-1562Show/hide
Query:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTEGQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYR---KYPPYKKYPPYKKRPPYKKYPPSSN
        M LKYFL+LLLA VLL+TTQALK+P  S+QEV        +PTT  T  T  T  A  +EESKFY+R   Y+   K PPYKKYPPYKKRPPYKKYPPSS+
Subjt:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTEGQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYR---KYPPYKKYPPYKKRPPYKKYPPSSN

A0A6J1EWV3 uncharacterized protein LOC1114368701.1e-2375.26Show/hide
Query:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTEGQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYRKYPPYKKYPPYKKRPPYKKYPPSSN
        M +KYFL+LLLAVVLLTTTQALK+P DS  EV PV+  QKLP    +TT TDTEPASE EESKFY++R  Y+KYPPYK+YPPYKKRPPYKKYPPSSN
Subjt:  MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTEGQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYRKYPPYKKYPPYKKRPPYKKYPPSSN

Q8H0R6 Proline-rich protein1.1e-1562.63Show/hide
Query:  KYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTE--GQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYR---KYPPYKKYPPYKKRPPYKKYPPSSN
        KYFL+LLLAVVLLTTTQALK+P++SNQE  P T+    KLPTT T            +EESKF++R   Y+   K PPYKKYPPYKKRPPYKKYPPSS+
Subjt:  KYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTE--GQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYR---KYPPYKKYPPYKKRPPYKKYPPSSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTGAAATACTTTCTTATGCTTCTTCTCGCAGTGGTACTTCTTACCACTACTCAAGCTCTGAAAAATCCATGGGACTCGAACCAGGAAGTGACTCCGGTCACCGA
AGGCCAAAAGCTTCCGACCACCACCACCACCACCACCACCACCGACACCGAGCCTGCGTCGGAGGATGAGGAATCCAAGTTCTACAAGAGGAGACCACGCTACAGAAAGT
ACCCACCCTACAAGAAATACCCACCATACAAGAAACGCCCCCCATACAAGAAGTACCCTCCATCCTCCAACTGA
mRNA sequenceShow/hide mRNA sequence
CAGGCAACCTCAAACCCAAAAGGCCAGAATGTCTCTGAAATACTTTCTTATGCTTCTTCTCGCAGTGGTACTTCTTACCACTACTCAAGCTCTGAAAAATCCATGGGACT
CGAACCAGGAAGTGACTCCGGTCACCGAAGGCCAAAAGCTTCCGACCACCACCACCACCACCACCACCACCGACACCGAGCCTGCGTCGGAGGATGAGGAATCCAAGTTC
TACAAGAGGAGACCACGCTACAGAAAGTACCCACCCTACAAGAAATACCCACCATACAAGAAACGCCCCCCATACAAGAAGTACCCTCCATCCTCCAACTGAAAGCCACC
CTAAAATTTGCGACCATCAATGTGACATGTTTGTTACATAAATAAGTGCTGCTACAACTTGCAGTGCCTAAATTTAGGGTAATATTAAGACCTTCATGAAGTTGGCTTTT
CATTTCTGTAATATGGTAATCTAAACTTGGTATATTCCATATGGGTGTATTATCTTTGCATTATGCTCCACTTATCGTGTAATTTAAGTTTGAATGGATATAATATTTTG
TCCTTTATTTCAAATCTTGGAGTCTTTTTTCGTTTTTTTAGTTCAATATGTGTGAGTGGATAAGAACAACCAACTTTGCATATTCTCACAATTGTATGATGTTGTCCACT
TTCGACATCAAATCTCATGGTTTTGCTTTTGAATCCCTCAAAATGTCATATACCAATGAAGATAATTGTCTTTACTTATAT
Protein sequenceShow/hide protein sequence
MSLKYFLMLLLAVVLLTTTQALKNPWDSNQEVTPVTEGQKLPTTTTTTTTTDTEPASEDEESKFYKRRPRYRKYPPYKKYPPYKKRPPYKKYPPSSN