; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0006813 (gene) of Snake gourd v1 genome

Gene IDTan0006813
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG06:33272362..33273501
RNA-Seq ExpressionTan0006813
SyntenyTan0006813
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]1.4e-2834.16Show/hide
Query:  DQIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWG
        +++ +E +G NIF  +F++  DR++ILE  PW FDK +L++ E  G+ + TD +FRYV FW+ +HNLP A    ++ L  G  +G   + D  +S    G
Subjt:  DQIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWG

Query:  STMRIRIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPE--LGMGGKQYGPNLRHLTSNFSPQQNHRSKVSDSRGRGR
          +RIR+ +DV  PLKRGL + +G   +     + Y +LP+FCY CG+I H+ RDC    +        ++GP +R ++   S     +    +    G 
Subjt:  STMRIRIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPE--LGMGGKQYGPNLRHLTSNFSPQQNHRSKVSDSRGRGR

Query:  TS
        +S
Subjt:  TS

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]8.8e-3140.35Show/hide
Query:  IERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMR
        ++ +GFNIFL  F    DR +IL   PW FD+A+++ID P    +  D +FR VS WVH  +L  A     M    GN +G F   + + + F WGS +R
Subjt:  IERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMR

Query:  IRIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCG-FEPELGMGGKQYGPNLR
        +R+R DV +PL RG+ L +       W P+ Y +LPDF Y CGR+ HI +DC     +      QYGP LR
Subjt:  IRIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCG-FEPELGMGGKQYGPNLR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]6.3e-2934.88Show/hide
Query:  ERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRI
        E +G NI++  FKS+ ++ ++L   PW F+K++L++  P    +  D  F + +FW+ IHN+P    +T+M  I G +LG   + +   +    G  +R+
Subjt:  ERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRI

Query:  RIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPEL--GMGGKQYGPNLRH--LTSNFSPQQNHRSKVSDSRGRG-RTS
        R+++DVS+PL+RG+ LK     +D+WCP+ Y KLPDFCY+CG+I H  R+C    ++      +QYG  LR   L  + S  +          GRG + +
Subjt:  RIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPEL--GMGGKQYGPNLRH--LTSNFSPQQNHRSKVSDSRGRG-RTS

Query:  RGRGGVTDPRKTVDN
         GRGG  D R+  +N
Subjt:  RGRGGVTDPRKTVDN

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]4.6e-3230Show/hide
Query:  QIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGS
        Q+ +E +G N+FL  F    D  ++++  PW+FDKA++++ +P  +   ++ EF  V+FW+H+ +LP +     M +  GN +G F+  D ++  F WG+
Subjt:  QIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGS

Query:  TMRIRIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFE----PELGMGGKQYGPNLRHLTSNFSPQQNHRSKV---SDSR
        ++RIR+ +D+++PL+RG+ + I       W P+ Y +LPDFCY CG I H   DC        +      +YGP LR + S    Q+  + K     DS 
Subjt:  TMRIRIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFE----PELGMGGKQYGPNLRHLTSNFSPQQNHRSKV---SDSR

Query:  GRGRTSRGRGGVTDPRKTVDNEATDNPNWSPVSPIRTQKNGGEDHTTKAA
        G    +    GV + ++ +  +   +   S  +  +T   GG    T  A
Subjt:  GRGRTSRGRGGVTDPRKTVDNEATDNPNWSPVSPIRTQKNGGEDHTTKAA

XP_042961334.1 uncharacterized protein LOC122296019 [Carya illinoinensis]1.5e-2736.52Show/hide
Query:  QIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGS
        ++  + VG N+FL +FK+  D+ +++   PW FDK +L I +  GA    D +F    FW+  H++P AG +  M    GN LG  L  D + S+  WG 
Subjt:  QIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGS

Query:  TMRIRIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPELGM-----GGKQYGPNLR
         +R+++ +D+++PL RG    I +  E  W P  Y +L +FCY CG I+H E  C  + E+G       GKQYG  LR
Subjt:  TMRIRIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPELGM-----GGKQYGPNLR

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein6.8e-2934.16Show/hide
Query:  DQIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWG
        +++ +E +G NIF  +F++  DR++ILE  PW FDK +L++ E  G+ + TD +FRYV FW+ +HNLP A    ++ L  G  +G   + D  +S    G
Subjt:  DQIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWG

Query:  STMRIRIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPE--LGMGGKQYGPNLRHLTSNFSPQQNHRSKVSDSRGRGR
          +RIR+ +DV  PLKRGL + +G   +     + Y +LP+FCY CG+I H+ RDC    +        ++GP +R ++   S     +    +    G 
Subjt:  STMRIRIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPE--LGMGGKQYGPNLRHLTSNFSPQQNHRSKVSDSRGRGR

Query:  TS
        +S
Subjt:  TS

A0A6J1BSZ1 uncharacterized protein LOC1110054814.2e-3140.35Show/hide
Query:  IERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMR
        ++ +GFNIFL  F    DR +IL   PW FD+A+++ID P    +  D +FR VS WVH  +L  A     M    GN +G F   + + + F WGS +R
Subjt:  IERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMR

Query:  IRIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCG-FEPELGMGGKQYGPNLR
        +R+R DV +PL RG+ L +       W P+ Y +LPDF Y CGR+ HI +DC     +      QYGP LR
Subjt:  IRIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCG-FEPELGMGGKQYGPNLR

A0A6J1D765 uncharacterized protein LOC1110179023.0e-2934.88Show/hide
Query:  ERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRI
        E +G NI++  FKS+ ++ ++L   PW F+K++L++  P    +  D  F + +FW+ IHN+P    +T+M  I G +LG   + +   +    G  +R+
Subjt:  ERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRI

Query:  RIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPEL--GMGGKQYGPNLRH--LTSNFSPQQNHRSKVSDSRGRG-RTS
        R+++DVS+PL+RG+ LK     +D+WCP+ Y KLPDFCY+CG+I H  R+C    ++      +QYG  LR   L  + S  +          GRG + +
Subjt:  RIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPEL--GMGGKQYGPNLRH--LTSNFSPQQNHRSKVSDSRGRG-RTS

Query:  RGRGGVTDPRKTVDN
         GRGG  D R+  +N
Subjt:  RGRGGVTDPRKTVDN

A0A6J1DU55 uncharacterized protein LOC1110231352.3e-3230Show/hide
Query:  QIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGS
        Q+ +E +G N+FL  F    D  ++++  PW+FDKA++++ +P  +   ++ EF  V+FW+H+ +LP +     M +  GN +G F+  D ++  F WG+
Subjt:  QIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGS

Query:  TMRIRIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFE----PELGMGGKQYGPNLRHLTSNFSPQQNHRSKV---SDSR
        ++RIR+ +D+++PL+RG+ + I       W P+ Y +LPDFCY CG I H   DC        +      +YGP LR + S    Q+  + K     DS 
Subjt:  TMRIRIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFE----PELGMGGKQYGPNLRHLTSNFSPQQNHRSKV---SDSR

Query:  GRGRTSRGRGGVTDPRKTVDNEATDNPNWSPVSPIRTQKNGGEDHTTKAA
        G    +    GV + ++ +  +   +   S  +  +T   GG    T  A
Subjt:  GRGRTSRGRGGVTDPRKTVDNEATDNPNWSPVSPIRTQKNGGEDHTTKAA

A0A6P9ESA8 uncharacterized protein LOC1089827702.4e-2632.86Show/hide
Query:  ERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRI
        + VG N FL + K   D+++I++  PW FDK ++ + +  G   + + +F++  FWV  H+LP AG      L  G  +   L  D  DS   WGS +R+
Subjt:  ERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRI

Query:  RIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCG----FEPELGMGGKQYGPNLRHLTSNFSPQQNHRSKVSDSRGRGRTSR
        R+ +D+++PL RG  L +G      W P  Y +LP+FCY CG+I+H+   C      +  L    +QYG  LR    +F  +         S+ R  T +
Subjt:  RIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCG----FEPELGMGGKQYGPNLRHLTSNFSPQQNHRSKVSDSRGRGRTSR

Query:  GRGGVTDPRK
        GR    D RK
Subjt:  GRGGVTDPRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGATCAGATAGATATCGAAAGGGTTGGATTTAACATATTCCTTTGCAAATTTAAATCGATGGGAGATAGACGGAAAATTTTGGAACAAGAACCTTGGTACTTCGA
CAAAGCTATCCTCCTTATCGATGAGCCAAGAGGAGCGTGTCGTTTCACTGATCACGAATTCCGGTATGTTTCTTTTTGGGTTCATATTCATAACTTACCTCCTGCAGGAC
AAGCAACGAAGATGACCCTGATATATGGCAACCGACTCGGGACTTTCCTTAAAGCTGATGTATCGGATTCGAAATTTATTTGGGGGAGCACGATGCGGATTCGAATTAGA
GTGGACGTTTCTGAACCTCTAAAGAGAGGCTTGATGTTGAAAATCGGAGTGATGGCAGAAGACATGTGGTGTCCGATGACATATGGGAAGCTCCCTGATTTCTGTTATCA
ATGTGGACGAATCAGGCACATTGAGAGGGATTGTGGTTTCGAACCTGAGTTAGGGATGGGAGGTAAGCAGTATGGGCCCAACCTCAGACACTTGACCTCAAACTTTAGTC
CTCAGCAAAACCACCGATCAAAAGTATCAGATTCGAGAGGAAGAGGACGAACAAGTCGAGGAAGAGGCGGGGTTACTGACCCGAGGAAGACAGTGGACAACGAGGCGACG
GATAACCCAAACTGGAGCCCTGTCTCACCGATCCGAACCCAAAAGAATGGGGGTGAAGACCACACGACGAAAGCAGCAGATCGAGGATCGAGGAAGGAGATGGGCAGCGA
GCCGGAGGATGGGCAGTTGTCCGACGACTTTCAGAGCATATTAAATGCTATTAATTTCTCTGTCTCAACGGAACCAAAGAAGGACGAAACGTCAGCGCATTCAAAGGGAA
CCCGAAAGATTCGGGCTGAGATTATTGAGGAGGTGAGGAGATCTTTACCCCTTGGAGACGAAAACGCCAAATCTGATGCTGTGAAATCAGGGGAAGCTTCTGGAACGAAG
ATTGAACGTGCGGGCCCCACCACTCCTAATGCTGGTAACGACAAAGAAGAAATGCTCGACAAATTCCTTGTGGGTGGGTTGGGATTCTCTCCAGATGCAGTAAATCCACC
AATCTCAATGGACTCTGGGCCAAAAATTAAAATGGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGATCAGATAGATATCGAAAGGGTTGGATTTAACATATTCCTTTGCAAATTTAAATCGATGGGAGATAGACGGAAAATTTTGGAACAAGAACCTTGGTACTTCGA
CAAAGCTATCCTCCTTATCGATGAGCCAAGAGGAGCGTGTCGTTTCACTGATCACGAATTCCGGTATGTTTCTTTTTGGGTTCATATTCATAACTTACCTCCTGCAGGAC
AAGCAACGAAGATGACCCTGATATATGGCAACCGACTCGGGACTTTCCTTAAAGCTGATGTATCGGATTCGAAATTTATTTGGGGGAGCACGATGCGGATTCGAATTAGA
GTGGACGTTTCTGAACCTCTAAAGAGAGGCTTGATGTTGAAAATCGGAGTGATGGCAGAAGACATGTGGTGTCCGATGACATATGGGAAGCTCCCTGATTTCTGTTATCA
ATGTGGACGAATCAGGCACATTGAGAGGGATTGTGGTTTCGAACCTGAGTTAGGGATGGGAGGTAAGCAGTATGGGCCCAACCTCAGACACTTGACCTCAAACTTTAGTC
CTCAGCAAAACCACCGATCAAAAGTATCAGATTCGAGAGGAAGAGGACGAACAAGTCGAGGAAGAGGCGGGGTTACTGACCCGAGGAAGACAGTGGACAACGAGGCGACG
GATAACCCAAACTGGAGCCCTGTCTCACCGATCCGAACCCAAAAGAATGGGGGTGAAGACCACACGACGAAAGCAGCAGATCGAGGATCGAGGAAGGAGATGGGCAGCGA
GCCGGAGGATGGGCAGTTGTCCGACGACTTTCAGAGCATATTAAATGCTATTAATTTCTCTGTCTCAACGGAACCAAAGAAGGACGAAACGTCAGCGCATTCAAAGGGAA
CCCGAAAGATTCGGGCTGAGATTATTGAGGAGGTGAGGAGATCTTTACCCCTTGGAGACGAAAACGCCAAATCTGATGCTGTGAAATCAGGGGAAGCTTCTGGAACGAAG
ATTGAACGTGCGGGCCCCACCACTCCTAATGCTGGTAACGACAAAGAAGAAATGCTCGACAAATTCCTTGTGGGTGGGTTGGGATTCTCTCCAGATGCAGTAAATCCACC
AATCTCAATGGACTCTGGGCCAAAAATTAAAATGGGCTAA
Protein sequenceShow/hide protein sequence
MTDQIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRIRIR
VDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPELGMGGKQYGPNLRHLTSNFSPQQNHRSKVSDSRGRGRTSRGRGGVTDPRKTVDNEAT
DNPNWSPVSPIRTQKNGGEDHTTKAADRGSRKEMGSEPEDGQLSDDFQSILNAINFSVSTEPKKDETSAHSKGTRKIRAEIIEEVRRSLPLGDENAKSDAVKSGEASGTK
IERAGPTTPNAGNDKEEMLDKFLVGGLGFSPDAVNPPISMDSGPKIKMG