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Tan0006817 (gene) of Snake gourd v1 genome

Gene IDTan0006817
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTubulin glycylase
Genome locationLG04:54030512..54032503
RNA-Seq ExpressionTan0006817
SyntenyTan0006817
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060329.1 uncharacterized protein E6C27_scaffold22G001140 [Cucumis melo var. makuwa]1.7e-7987.43Show/hide
Query:  MGSEVDKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEED
        +GS  DKVGMAMEGVASIALLPCGS+SGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN K+E+TVVVECRGHDAARF SI HAHGWEED
Subjt:  MGSEVDKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEED

Query:  VVTMVEKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE
        VV+MVEKKHGKNE ++SFECQ LKSE+AAEDHIRQF+PKL GQDAVVN+G MSI GLDFEAEEQP E
Subjt:  VVTMVEKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE

XP_022144427.1 uncharacterized protein LOC111014113 isoform X2 [Momordica charantia]5.0e-7986.05Show/hide
Query:  GSEVDK------VGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAH
        GSEV        + MAMEGVASIALLPCGS+SGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVE RGHDAARF SI+HAH
Subjt:  GSEVDK------VGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAH

Query:  GWEEDVVTMVEKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE
        GWEEDVV++V+KKHGKN+  ISFECQTLKSEQAAE+HIRQFIPKLAGQDAVVN+G MSI+GLDFEAEEQPGE
Subjt:  GWEEDVVTMVEKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE

XP_022930568.1 uncharacterized protein LOC111436977 isoform X1 [Cucurbita moschata]8.5e-7990.12Show/hide
Query:  DKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEEDVVTMV
        DK  MAMEGVASIALLPCGS+SGHFIQLPH +CYGLHGTELECERECSRGEDYRLIKLTITNYNNK+E+TVVVE RGHDAARFRSI HAHGWEEDVV MV
Subjt:  DKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEEDVVTMV

Query:  EKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE
        EKKHGKN+ +ISFECQTLKSEQAAEDHIRQFIPKL GQDAVVN+G MSIRGLDFEAEEQPGE
Subjt:  EKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE

XP_023515561.1 uncharacterized protein LOC111779684 isoform X1 [Cucurbita pepo subsp. pepo]1.7e-7990.74Show/hide
Query:  DKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEEDVVTMV
        DKV MAMEGVASIALLPCGS+SGHFIQLPH +CYGLHGTELECERECSRGEDYRLIKLTITNYNNK+E+TVVVE RGHDAARFRSI HAHGWEEDVV MV
Subjt:  DKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEEDVVTMV

Query:  EKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE
        EKKHGKN+ +ISFECQTLKSEQAAEDHIRQFIPKL GQDAVVN+G MSIRGLDFEAEEQPGE
Subjt:  EKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE

XP_023515562.1 uncharacterized protein LOC111779684 isoform X2 [Cucurbita pepo subsp. pepo]1.7e-7990.74Show/hide
Query:  DKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEEDVVTMV
        DKV MAMEGVASIALLPCGS+SGHFIQLPH +CYGLHGTELECERECSRGEDYRLIKLTITNYNNK+E+TVVVE RGHDAARFRSI HAHGWEEDVV MV
Subjt:  DKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEEDVVTMV

Query:  EKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE
        EKKHGKN+ +ISFECQTLKSEQAAEDHIRQFIPKL GQDAVVN+G MSIRGLDFEAEEQPGE
Subjt:  EKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE

TrEMBL top hitse value%identityAlignment
A0A5D3DF47 Uncharacterized protein8.3e-8087.43Show/hide
Query:  MGSEVDKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEED
        +GS  DKVGMAMEGVASIALLPCGS+SGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN K+E+TVVVECRGHDAARF SI HAHGWEED
Subjt:  MGSEVDKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEED

Query:  VVTMVEKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE
        VV+MVEKKHGKNE ++SFECQ LKSE+AAEDHIRQF+PKL GQDAVVN+G MSI GLDFEAEEQP E
Subjt:  VVTMVEKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE

A0A6J1CTN4 uncharacterized protein LOC111014113 isoform X22.4e-7986.05Show/hide
Query:  GSEVDK------VGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAH
        GSEV        + MAMEGVASIALLPCGS+SGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVE RGHDAARF SI+HAH
Subjt:  GSEVDK------VGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAH

Query:  GWEEDVVTMVEKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE
        GWEEDVV++V+KKHGKN+  ISFECQTLKSEQAAE+HIRQFIPKLAGQDAVVN+G MSI+GLDFEAEEQPGE
Subjt:  GWEEDVVTMVEKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE

A0A6J1ERU0 uncharacterized protein LOC111436977 isoform X24.1e-7990.12Show/hide
Query:  DKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEEDVVTMV
        DK  MAMEGVASIALLPCGS+SGHFIQLPH +CYGLHGTELECERECSRGEDYRLIKLTITNYNNK+E+TVVVE RGHDAARFRSI HAHGWEEDVV MV
Subjt:  DKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEEDVVTMV

Query:  EKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE
        EKKHGKN+ +ISFECQTLKSEQAAEDHIRQFIPKL GQDAVVN+G MSIRGLDFEAEEQPGE
Subjt:  EKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE

A0A6J1EVL3 uncharacterized protein LOC111436977 isoform X14.1e-7990.12Show/hide
Query:  DKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEEDVVTMV
        DK  MAMEGVASIALLPCGS+SGHFIQLPH +CYGLHGTELECERECSRGEDYRLIKLTITNYNNK+E+TVVVE RGHDAARFRSI HAHGWEEDVV MV
Subjt:  DKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEEDVVTMV

Query:  EKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE
        EKKHGKN+ +ISFECQTLKSEQAAEDHIRQFIPKL GQDAVVN+G MSIRGLDFEAEEQPGE
Subjt:  EKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE

A0A6J1IS39 uncharacterized protein LOC111480016 isoform X24.5e-7888.89Show/hide
Query:  DKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEEDVVTMV
        DKV MAMEGVASIALLPCGS+SGHFIQLPH +CYGLHGTELECERECSRGEDYRLIKLTITNYNN +E+TVVVE RGHDAARF SI HAHGWEEDVV MV
Subjt:  DKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEEDVVTMV

Query:  EKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE
        EKKHGKN+ +ISFECQTLKSE+AAEDHIRQFIPKL GQDAVVN+G MSIRGLDFEAEEQPGE
Subjt:  EKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29280.1 unknown protein1.9e-6873.58Show/hide
Query:  DKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEEDVVTMV
        D+ G   EGVASIALLPCG+ISGHFIQ+P SICYGLHGTEL CE ECSRGEDYRLIKLTI +YN KKEQTVVVEC+GHDAAR   ++HAHGWEEDV+ +V
Subjt:  DKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEEDVVTMV

Query:  EKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQ
        E+KHGK +  +SFEC+TLK+++AAEDHIRQF+PKLAG DAV+N+G M I GLDF A E+
Subjt:  EKKHGKNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCAGAAGTAGATAAGGTGGGAATGGCGATGGAAGGAGTTGCTTCTATTGCACTTTTGCCTTGTGGCTCCATCTCCGGCCACTTCATTCAGCTTCCTCACTCCAT
CTGCTACGGCCTCCATGGCACTGAATTGGAATGTGAAAGAGAGTGCAGCAGGGGTGAGGATTACCGCTTGATCAAGCTTACAATTACAAACTACAATAATAAGAAAGAAC
AAACAGTCGTTGTTGAATGCAGAGGCCATGATGCTGCACGGTTCCGCAGCATCGATCATGCTCATGGTTGGGAGGAGGATGTAGTAACAATGGTTGAAAAAAAACATGGA
AAGAACGAGACTGTGATTTCGTTCGAGTGTCAAACGTTGAAGTCGGAGCAAGCGGCCGAAGATCATATCAGACAGTTTATTCCCAAGTTAGCAGGCCAAGATGCTGTGGT
GAACATGGGAGCAATGAGCATTAGAGGATTGGATTTTGAAGCGGAGGAGCAGCCAGGAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATCAGAAGTAGATAAGGTGGGAATGGCGATGGAAGGAGTTGCTTCTATTGCACTTTTGCCTTGTGGCTCCATCTCCGGCCACTTCATTCAGCTTCCTCACTCCAT
CTGCTACGGCCTCCATGGCACTGAATTGGAATGTGAAAGAGAGTGCAGCAGGGGTGAGGATTACCGCTTGATCAAGCTTACAATTACAAACTACAATAATAAGAAAGAAC
AAACAGTCGTTGTTGAATGCAGAGGCCATGATGCTGCACGGTTCCGCAGCATCGATCATGCTCATGGTTGGGAGGAGGATGTAGTAACAATGGTTGAAAAAAAACATGGA
AAGAACGAGACTGTGATTTCGTTCGAGTGTCAAACGTTGAAGTCGGAGCAAGCGGCCGAAGATCATATCAGACAGTTTATTCCCAAGTTAGCAGGCCAAGATGCTGTGGT
GAACATGGGAGCAATGAGCATTAGAGGATTGGATTTTGAAGCGGAGGAGCAGCCAGGAGAATGA
Protein sequenceShow/hide protein sequence
MGSEVDKVGMAMEGVASIALLPCGSISGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVECRGHDAARFRSIDHAHGWEEDVVTMVEKKHG
KNETVISFECQTLKSEQAAEDHIRQFIPKLAGQDAVVNMGAMSIRGLDFEAEEQPGE