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Tan0006857 (gene) of Snake gourd v1 genome

Gene IDTan0006857
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionembryo sac development arrest 6
Genome locationLG06:18287601..18289518
RNA-Seq ExpressionTan0006857
SyntenyTan0006857
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039884.1 uncharacterized protein E6C27_scaffold122G001610 [Cucumis melo var. makuwa]1.6e-2754.49Show/hide
Query:  NTTKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAE-------AHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDH---PASAS
        NTTKTMRLPPRRL+T P P++      NKRKE EGLD+ +       AHQL+ TA KVP P   PH  QLLAGYLAHEFLT GTLFGQ WD+   PA+A+
Subjt:  NTTKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAE-------AHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDH---PASAS

Query:  A------------SASAAEPTEKPQAEL---HLQNYQSYVEVSNLLKHPGAHFEGV
        A            S +  E  EK QA+    H +NYQSYVEV+NLLKH G+H +G+
Subjt:  A------------SASAAEPTEKPQAEL---HLQNYQSYVEVSNLLKHPGAHFEGV

KAG6576089.1 Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3468.46Show/hide
Query:  MNTTKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAEAHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDHPASASASASAAEPT
        MNTTKTMRLPPRRL+T  GPSS    RPNKRKE +G D+ EAHQL+ TA KV K P+ P  N LLAGYLAHEF T GTLFGQ WDHP   S +AS  +  
Subjt:  MNTTKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAEAHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDHPASASASASAAEPT

Query:  EKPQAELHLQNYQSYVEVSNLLKHPGAHFE
        EK QAELH +NYQSYVEV+NLLKH GAHF+
Subjt:  EKPQAELHLQNYQSYVEVSNLLKHPGAHFE

KAG7014604.1 hypothetical protein SDJN02_24783, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-3266.67Show/hide
Query:  MRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAEAHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDHPASASASASAAEPTEKPQAE
        MRLPPRRL+T  GPSS    RPNKRKE +G D+ EAHQL+ TA KV K P+ P  N LLAGYLAHEF T GTLFGQ WDHP   S +AS  +  EK QAE
Subjt:  MRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAEAHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDHPASASASASAAEPTEKPQAE

Query:  LHLQNYQSYVEVSNLLKHPGAHFEGV
        LH +NYQSYVEV+NLLKH GAHF+G+
Subjt:  LHLQNYQSYVEVSNLLKHPGAHFEGV

XP_011656778.1 uncharacterized protein LOC105435768 [Cucumis sativus]2.8e-3258.86Show/hide
Query:  NTTKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGL----DEAEAHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDHP-------ASA
        NTTKTMRLPPRRL+T P P+       NKRKE EGL    D+ EAHQL LTA KVPKP  TPH  QLLAGYLAHEFLT GTLFGQ WD+P       A+A
Subjt:  NTTKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGL----DEAEAHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDHP-------ASA

Query:  SASASAA------------EPTEKPQAELHL----QNYQSYVEVSNLLKHPGAHFEGV
         AS+S++            EP EK QAE  L    +NYQSYVEV+NLLKH G H EG+
Subjt:  SASASAA------------EPTEKPQAELHL----QNYQSYVEVSNLLKHPGAHFEGV

XP_038906548.1 uncharacterized protein LOC120092519 [Benincasa hispida]2.1e-4071.74Show/hide
Query:  MNTTKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAEAHQLTLTATKVPKPPSTP---HLNQLLAGYLAHEFLTNGTLFGQPWDHPASASASASA-
        MNTTKTMRLPPRRL+T P    RPI RP KRKE EGLD+ EAHQL+LTA KVPKPP  P   H N LLAGYLAHEFLT GTLFGQ WD P  A ASASA 
Subjt:  MNTTKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAEAHQLTLTATKVPKPPSTP---HLNQLLAGYLAHEFLTNGTLFGQPWDHPASASASASA-

Query:  --AEPTEKPQAELHLQNYQSYVEVSNLLKHPGAHFEGV
          AEP+EK Q ELH +NYQSYVEV+NLLKH G HF+G+
Subjt:  --AEPTEKPQAELHLQNYQSYVEVSNLLKHPGAHFEGV

TrEMBL top hitse value%identityAlignment
A0A0A0KDC0 Uncharacterized protein1.3e-3258.86Show/hide
Query:  NTTKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGL----DEAEAHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDHP-------ASA
        NTTKTMRLPPRRL+T P P+       NKRKE EGL    D+ EAHQL LTA KVPKP  TPH  QLLAGYLAHEFLT GTLFGQ WD+P       A+A
Subjt:  NTTKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGL----DEAEAHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDHP-------ASA

Query:  SASASAA------------EPTEKPQAELHL----QNYQSYVEVSNLLKHPGAHFEGV
         AS+S++            EP EK QAE  L    +NYQSYVEV+NLLKH G H EG+
Subjt:  SASASAA------------EPTEKPQAELHL----QNYQSYVEVSNLLKHPGAHFEGV

A0A1S3CBD7 uncharacterized protein LOC1034989151.0e-2754.14Show/hide
Query:  NTTKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAE-------AHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDH---PASAS
        NTTKTMRLPPRRL+T P P++      NKRKE EGLD+ +       AHQL+ TA KVP P   PH  QLLAGYLAHEFLT GTLFGQ WD+   PA+A+
Subjt:  NTTKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAE-------AHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDH---PASAS

Query:  A-------------SASAAEPTEKPQAEL---HLQNYQSYVEVSNLLKHPGAHFEGV
        A             S +  E  EK QA+    H +NYQSYVEV+NLLKH G+H +G+
Subjt:  A-------------SASAAEPTEKPQAEL---HLQNYQSYVEVSNLLKHPGAHFEGV

A0A2P5XWB4 Uncharacterized protein5.0e-1950.35Show/hide
Query:  TKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAEAHQLTLTATKVPKPPSTPHL--NQLLAGYLAHEFLTNGTLFGQPWD------HPA-SASASA
        TKTMRLPPRR+     P S P    NKRKE +G D      L   ++K P P + P L  N LLAGYLAHEFLTNGTLFGQPWD       PA S   + 
Subjt:  TKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAEAHQLTLTATKVPKPPSTPHL--NQLLAGYLAHEFLTNGTLFGQPWD------HPA-SASASA

Query:  SAAEPTEKP---QAELHLQNYQSYVEVSNLLKHPGAHFEGV
          AEP ++     AEL L+ +Q YVEV++LLK  GAH +G+
Subjt:  SAAEPTEKP---QAELHLQNYQSYVEVSNLLKHPGAHFEGV

A0A5A7T8V2 Uncharacterized protein7.7e-2854.49Show/hide
Query:  NTTKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAE-------AHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDH---PASAS
        NTTKTMRLPPRRL+T P P++      NKRKE EGLD+ +       AHQL+ TA KVP P   PH  QLLAGYLAHEFLT GTLFGQ WD+   PA+A+
Subjt:  NTTKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAE-------AHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDH---PASAS

Query:  A------------SASAAEPTEKPQAEL---HLQNYQSYVEVSNLLKHPGAHFEGV
        A            S +  E  EK QA+    H +NYQSYVEV+NLLKH G+H +G+
Subjt:  A------------SASAAEPTEKPQAEL---HLQNYQSYVEVSNLLKHPGAHFEGV

A0A5D2PWX7 Uncharacterized protein5.0e-1950.35Show/hide
Query:  TKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAEAHQLTLTATKVPKPPSTPHL--NQLLAGYLAHEFLTNGTLFGQPWD------HPA-SASASA
        TKTMRLPPRR+     P S P    NKRKE +G D      L   ++K P P + P L  N LLAGYLAHEFLTNGTLFGQPWD       PA S   + 
Subjt:  TKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAEAHQLTLTATKVPKPPSTPHL--NQLLAGYLAHEFLTNGTLFGQPWD------HPA-SASASA

Query:  SAAEPTEKP---QAELHLQNYQSYVEVSNLLKHPGAHFEGV
          AEP ++     AEL L+ +Q YVEV++LLK  GAH +G+
Subjt:  SAAEPTEKP---QAELHLQNYQSYVEVSNLLKHPGAHFEGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04000.1 unknown protein4.9e-1136.42Show/hide
Query:  TKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGL------DEAEAHQLTLTATKVPKPPSTP-------------HLNQL-LAGYLAHEFLTNGTLFGQP
        TKTMRLPPRR++T            +KRKE +        +  E  +      K+  PP  P               NQL LAGYL+HE+LT GTLFG+ 
Subjt:  TKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGL------DEAEAHQLTLTATKVPKPPSTP-------------HLNQL-LAGYLAHEFLTNGTLFGQP

Query:  WDHPASASASASAAEP--TEKPQAELHLQNYQSYVEVSNLLKHPGAHFEGV
        W+  A A A +S  +P  T +P  E   +  + Y EV+NLL+  GA   G+
Subjt:  WDHPASASASASAAEP--TEKPQAELHLQNYQSYVEVSNLLKHPGAHFEGV

AT3G23440.1 embryo sac development arrest 67.6e-0435.21Show/hide
Query:  NQLLAGYLAHEFLTNGTLFGQPWDHPASASASASAAEPTEKPQAELHLQNYQSYVEVSNLLKHPGAHFEGV
        N LLAGY+AHE+LT GT+ G+      +      +  P +  + +   +  QSY EV+++ K  G H  GV
Subjt:  NQLLAGYLAHEFLTNGTLFGQPWDHPASASASASAAEPTEKPQAELHLQNYQSYVEVSNLLKHPGAHFEGV

AT5G44060.1 unknown protein1.5e-1238.26Show/hide
Query:  TKTMRLPPRR--------------LITPPGPSSRPILRPNKRKEIEGLDEAEAHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDHPAS
        TKTMRLPPRR              +I PP P ++ I+   K+  I         + T TAT     P     NQLLAGYLAHEFL NGTLFG+ W +P  
Subjt:  TKTMRLPPRR--------------LITPPGPSSRPILRPNKRKEIEGLDEAEAHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDHPAS

Query:  ASA---SASAAEPTE-KPQAELHLQNY--QSYVEVSNLLKHPGAHFEGV
        A A   +  + +P + KP  ++   ++  + YVEV+N+L+  G H  G+
Subjt:  ASA---SASAAEPTE-KPQAELHLQNY--QSYVEVSNLLKHPGAHFEGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGATTAATTACGCCTCCTGGGCCCAGTTCCAGGCCCATCCTCAGGCCCAATAAAAGGAAAGAGATAGAGGGCCT
TGATGAGGCCGAGGCCCACCAACTGACGTTAACGGCTACTAAAGTACCGAAGCCGCCGTCGACGCCACATTTGAACCAGCTCCTAGCCGGCTACTTGGCCCACGAGTTTC
TCACCAACGGAACCCTTTTCGGCCAGCCATGGGATCATCCGGCTTCGGCTTCGGCTTCGGCTTCAGCTGCTGAGCCCACCGAGAAACCCCAAGCCGAGCTACATCTCCAG
AATTATCAGTCCTACGTGGAGGTTTCTAATTTGTTGAAACATCCTGGGGCCCACTTTGAAGGAGTAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGATTAATTACGCCTCCTGGGCCCAGTTCCAGGCCCATCCTCAGGCCCAATAAAAGGAAAGAGATAGAGGGCCT
TGATGAGGCCGAGGCCCACCAACTGACGTTAACGGCTACTAAAGTACCGAAGCCGCCGTCGACGCCACATTTGAACCAGCTCCTAGCCGGCTACTTGGCCCACGAGTTTC
TCACCAACGGAACCCTTTTCGGCCAGCCATGGGATCATCCGGCTTCGGCTTCGGCTTCGGCTTCAGCTGCTGAGCCCACCGAGAAACCCCAAGCCGAGCTACATCTCCAG
AATTATCAGTCCTACGTGGAGGTTTCTAATTTGTTGAAACATCCTGGGGCCCACTTTGAAGGAGTAGGATGA
Protein sequenceShow/hide protein sequence
MNTTKTMRLPPRRLITPPGPSSRPILRPNKRKEIEGLDEAEAHQLTLTATKVPKPPSTPHLNQLLAGYLAHEFLTNGTLFGQPWDHPASASASASAAEPTEKPQAELHLQ
NYQSYVEVSNLLKHPGAHFEGVG