; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0006875 (gene) of Snake gourd v1 genome

Gene IDTan0006875
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionC2H2-type domain-containing protein
Genome locationLG01:29795050..29795556
RNA-Seq ExpressionTan0006875
SyntenyTan0006875
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF41928.1 Transcriptional regulator SUPERMAN, putative [Ricinus communis]2.2e-1833.99Show/hide
Query:  GCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPS------SSLSLSSNKMVVDTLKMISTTPAGLPWVV
        GC + + DQ    N+++          RSYEC FC+RGF+NAQALGGHMNIHRK+KAKLK ST +       S+ + SN ++  +   I T P+  P + 
Subjt:  GCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPS------SSLSLSSNKMVVDTLKMISTTPAGLPWVV

Query:  SPTSRSR-----------DKKNSSFRSEETLIGEVQ--------------------------GQLH----------HDSTVSELDLELRLGPEPQNSTPS
          + + R           DK++ + +  +T +GE+Q                          G LH          H  + SELDLELRLGPEP +S+P+
Subjt:  SPTSRSR-----------DKKNSSFRSEETLIGEVQ--------------------------GQLH----------HDSTVSELDLELRLGPEPQNSTPS

Query:  SAS
        + +
Subjt:  SAS

XP_004145329.1 transcriptional regulator TAC1 [Cucumis sativus]1.8e-3655.88Show/hide
Query:  MEIDQQ-GAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLP
        MEIDQQ  A CE Q          EEQS  VNQST RSYEC FCKRGFTNAQALGGHMNIHRKEKAKLKQS  +SSLS S NKMVVDT KM+S TP  LP
Subjt:  MEIDQQ-GAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLP

Query:  WVVSPTSRSRDKKNSSFRSEETLIGEVQGQL-----------------------------------HHDSTVSELDLELRLGPEPQNSTPSSASSSTGST
        WVV   S  ++   S    EETLI E   QL                                    H S+VSELDLELRLGPEPQNST SS+S  TG T
Subjt:  WVVSPTSRSRDKKNSSFRSEETLIGEVQGQL-----------------------------------HHDSTVSELDLELRLGPEPQNSTPSSASSSTGST

Query:  RHFF
         HFF
Subjt:  RHFF

XP_008457447.1 PREDICTED: transcriptional regulator TAC1-like [Cucumis melo]6.2e-3754.63Show/hide
Query:  MEIDQQ-GAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLP
        MEIDQQ  A CE Q+Q              VNQSTARSYEC FCKRGFTNAQALGGHMNIHRKEKAKLKQS  +SSLS S NKMVVDT KM+S TP   P
Subjt:  MEIDQQ-GAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLP

Query:  WVV-SPTSRSRDKKNSSFRSEETLIGEVQGQL-----------------------------------HHDSTVSELDLELRLGPEPQNSTPSSASSSTGS
        WVV SP++R    +++    EETLI E   QL                                    H S+VSELDLELRLGPEPQNSTPS+ S  TG 
Subjt:  WVV-SPTSRSRDKKNSSFRSEETLIGEVQGQL-----------------------------------HHDSTVSELDLELRLGPEPQNSTPSSASSSTGS

Query:  TRHFF
        T HFF
Subjt:  TRHFF

XP_022141797.1 transcriptional regulator TAC1-like [Momordica charantia]5.1e-3951.67Show/hide
Query:  MEIDQQGAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLPW
        MEID+ GAGCEIQD+DQ          + + +   RSYEC FCKRGFTNAQALGGHMNIHRK+KAK+KQS  SSSLS+SSNKM VD +  I +TPA LPW
Subjt:  MEIDQQGAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLPW

Query:  VVSPTS-----RSRDK----KNSSFRSEETLIGEVQ--------------------------------GQLHHDSTVSELDLELRLGPEPQNSTPSSASS
        V+  T+     R  D+    + +S   EETL G+VQ                                    H STVSELDLELRLGPEPQNSTPS  S+
Subjt:  VVSPTS-----RSRDK----KNSSFRSEETLIGEVQ--------------------------------GQLHHDSTVSELDLELRLGPEPQNSTPSSASS

Query:  STGSTRHFF
         TGS+RHFF
Subjt:  STGSTRHFF

XP_038895788.1 transcriptional regulator TAC1-like [Benincasa hispida]3.9e-3957.64Show/hide
Query:  MEIDQQGAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMI-STTPAGLP
        MEIDQQ A CE Q          EEQS  VN+S ARSYEC FCKRGFTNAQALGGHMNIHRKEKAKLKQS  S SLS SSNKMVVD  KMI  TTP  LP
Subjt:  MEIDQQGAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMI-STTPAGLP

Query:  WVVSPTSRSRDKKNSSFRSEETLIGEVQGQL----------------------------------HHDSTVSELDLELRLGPEPQNSTPSSASSSTGSTR
        WVVSP S S   + S    EETLI E   QL                                   H S++SELDLELRLGPEPQNSTPSS   STG T 
Subjt:  WVVSPTSRSRDKKNSSFRSEETLIGEVQGQL----------------------------------HHDSTVSELDLELRLGPEPQNSTPSSASSSTGSTR

Query:  HFF
        HFF
Subjt:  HFF

TrEMBL top hitse value%identityAlignment
A0A0A0LXG2 C2H2-type domain-containing protein8.7e-3755.88Show/hide
Query:  MEIDQQ-GAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLP
        MEIDQQ  A CE Q          EEQS  VNQST RSYEC FCKRGFTNAQALGGHMNIHRKEKAKLKQS  +SSLS S NKMVVDT KM+S TP  LP
Subjt:  MEIDQQ-GAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLP

Query:  WVVSPTSRSRDKKNSSFRSEETLIGEVQGQL-----------------------------------HHDSTVSELDLELRLGPEPQNSTPSSASSSTGST
        WVV   S  ++   S    EETLI E   QL                                    H S+VSELDLELRLGPEPQNST SS+S  TG T
Subjt:  WVVSPTSRSRDKKNSSFRSEETLIGEVQGQL-----------------------------------HHDSTVSELDLELRLGPEPQNSTPSSASSSTGST

Query:  RHFF
         HFF
Subjt:  RHFF

A0A1S3C679 transcriptional regulator TAC1-like3.0e-3754.63Show/hide
Query:  MEIDQQ-GAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLP
        MEIDQQ  A CE Q+Q              VNQSTARSYEC FCKRGFTNAQALGGHMNIHRKEKAKLKQS  +SSLS S NKMVVDT KM+S TP   P
Subjt:  MEIDQQ-GAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLP

Query:  WVV-SPTSRSRDKKNSSFRSEETLIGEVQGQL-----------------------------------HHDSTVSELDLELRLGPEPQNSTPSSASSSTGS
        WVV SP++R    +++    EETLI E   QL                                    H S+VSELDLELRLGPEPQNSTPS+ S  TG 
Subjt:  WVV-SPTSRSRDKKNSSFRSEETLIGEVQGQL-----------------------------------HHDSTVSELDLELRLGPEPQNSTPSSASSSTGS

Query:  TRHFF
        T HFF
Subjt:  TRHFF

A0A5A7VKP9 Transcriptional regulator TAC1-like3.0e-3754.63Show/hide
Query:  MEIDQQ-GAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLP
        MEIDQQ  A CE Q+Q              VNQSTARSYEC FCKRGFTNAQALGGHMNIHRKEKAKLKQS  +SSLS S NKMVVDT KM+S TP   P
Subjt:  MEIDQQ-GAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLP

Query:  WVV-SPTSRSRDKKNSSFRSEETLIGEVQGQL-----------------------------------HHDSTVSELDLELRLGPEPQNSTPSSASSSTGS
        WVV SP++R    +++    EETLI E   QL                                    H S+VSELDLELRLGPEPQNSTPS+ S  TG 
Subjt:  WVV-SPTSRSRDKKNSSFRSEETLIGEVQGQL-----------------------------------HHDSTVSELDLELRLGPEPQNSTPSSASSSTGS

Query:  TRHFF
        T HFF
Subjt:  TRHFF

A0A6J1CKV7 transcriptional regulator TAC1-like2.5e-3951.67Show/hide
Query:  MEIDQQGAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLPW
        MEID+ GAGCEIQD+DQ          + + +   RSYEC FCKRGFTNAQALGGHMNIHRK+KAK+KQS  SSSLS+SSNKM VD +  I +TPA LPW
Subjt:  MEIDQQGAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLPW

Query:  VVSPTS-----RSRDK----KNSSFRSEETLIGEVQ--------------------------------GQLHHDSTVSELDLELRLGPEPQNSTPSSASS
        V+  T+     R  D+    + +S   EETL G+VQ                                    H STVSELDLELRLGPEPQNSTPS  S+
Subjt:  VVSPTS-----RSRDK----KNSSFRSEETLIGEVQ--------------------------------GQLHHDSTVSELDLELRLGPEPQNSTPSSASS

Query:  STGSTRHFF
         TGS+RHFF
Subjt:  STGSTRHFF

B9S3E6 Transcriptional regulator SUPERMAN, putative1.1e-1833.99Show/hide
Query:  GCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPS------SSLSLSSNKMVVDTLKMISTTPAGLPWVV
        GC + + DQ    N+++          RSYEC FC+RGF+NAQALGGHMNIHRK+KAKLK ST +       S+ + SN ++  +   I T P+  P + 
Subjt:  GCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPS------SSLSLSSNKMVVDTLKMISTTPAGLPWVV

Query:  SPTSRSR-----------DKKNSSFRSEETLIGEVQ--------------------------GQLH----------HDSTVSELDLELRLGPEPQNSTPS
          + + R           DK++ + +  +T +GE+Q                          G LH          H  + SELDLELRLGPEP +S+P+
Subjt:  SPTSRSR-----------DKKNSSFRSEETLIGEVQ--------------------------GQLH----------HDSTVSELDLELRLGPEPQNSTPS

Query:  SAS
        + +
Subjt:  SAS

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 101.8e-0765.71Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQS
        RSY C FC+R F +AQALGGHMN+HR+++A+LKQ+
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQS

Q38895 Transcriptional regulator SUPERMAN4.8e-0865.85Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKEKAKLK-QSTPSSS
        RSY C FCKR F +AQALGGHMN+HR+++A+L+ Q +PSSS
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKEKAKLK-QSTPSSS

Q9LHS9 Probable transcriptional regulator RABBIT EARS2.4e-0762.5Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSS
        RSY C FC R F +AQALGGHMN+HR+++A+LKQ + S S
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSS

Q9SLB8 Zinc finger protein 111.2e-0661.76Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQ
        ++Y C FC+R F +AQALGGHMN+HR+++AKL+Q
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQ

Q9SR34 Transcriptional regulator TAC14.3e-0950Show/hide
Query:  DQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQ
        D   + +     Q +  + + +RSY C FC RGF+NAQALGGHMNIHR+++AKL+Q
Subjt:  DQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQ

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 101.3e-0865.71Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQS
        RSY C FC+R F +AQALGGHMN+HR+++A+LKQ+
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQS

AT3G09290.1 telomerase activator13.1e-1050Show/hide
Query:  DQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQ
        D   + +     Q +  + + +RSY C FC RGF+NAQALGGHMNIHR+++AKL+Q
Subjt:  DQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQ

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein3.4e-0965.85Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKEKAKLK-QSTPSSS
        RSY C FCKR F +AQALGGHMN+HR+++A+L+ Q +PSSS
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKEKAKLK-QSTPSSS

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein1.9e-1235.51Show/hide
Query:  EEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLPW---VVSPTSRSRDKKNSSFRSEE
        + +S S + S AR Y C FC+RGF+NAQALGGHMNIHRK++AKL+Q+        S + +   +          LP+    V P  +  D K+     +E
Subjt:  EEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLPW---VVSPTSRSRDKKNSSFRSEE

Query:  TLIGEVQGQLHHDSTVSELDLELRLGPEPQNSTPSSAS
                Q     +   +DLELRLG +P   T S+++
Subjt:  TLIGEVQGQLHHDSTVSELDLELRLGPEPQNSTPSSAS

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein4.0e-1035.94Show/hide
Query:  VMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLPWVVSPTSRSRDKKNSSFRSE
        V +    S SV+  T R YEC FCKRGFTNAQALGGHMNIHR+++    +    + ++LS           +++   G   V S   R+     +S   +
Subjt:  VMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLPWVVSPTSRSRDKKNSSFRSE

Query:  ETLIGEVQGQLHHDSTV-SELDLELRLG
           IG +  +  +     +E+DLELRLG
Subjt:  ETLIGEVQGQLHHDSTV-SELDLELRLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTGATCAACAAGGTGCAGGCTGTGAGATTCAAGATCAAGATCAAGAAAAAGTGATGAACACAGAAGAACAAAGTATAAGTGTGAATCAATCAACAGCTAGATC
TTATGAGTGTATTTTTTGCAAAAGGGGCTTCACAAATGCACAAGCTTTAGGAGGCCATATGAACATACATAGAAAAGAGAAGGCCAAGCTCAAGCAATCGACGCCGTCGT
CATCGTTGTCGTTGTCGTCGAACAAGATGGTTGTAGATACCTTGAAGATGATTTCGACCACCCCCGCAGGGTTGCCGTGGGTGGTCTCGCCGACGAGTCGAAGTAGAGAC
AAGAAAAATAGCTCTTTCAGATCAGAAGAAACCCTAATTGGTGAAGTCCAGGGACAGCTTCATCATGATTCTACTGTCTCCGAGTTGGATCTTGAGCTTAGATTAGGACC
TGAGCCGCAGAATTCAACTCCATCATCGGCCTCTAGTTCTACCGGTAGTACTAGGCACTTTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTGATCAACAAGGTGCAGGCTGTGAGATTCAAGATCAAGATCAAGAAAAAGTGATGAACACAGAAGAACAAAGTATAAGTGTGAATCAATCAACAGCTAGATC
TTATGAGTGTATTTTTTGCAAAAGGGGCTTCACAAATGCACAAGCTTTAGGAGGCCATATGAACATACATAGAAAAGAGAAGGCCAAGCTCAAGCAATCGACGCCGTCGT
CATCGTTGTCGTTGTCGTCGAACAAGATGGTTGTAGATACCTTGAAGATGATTTCGACCACCCCCGCAGGGTTGCCGTGGGTGGTCTCGCCGACGAGTCGAAGTAGAGAC
AAGAAAAATAGCTCTTTCAGATCAGAAGAAACCCTAATTGGTGAAGTCCAGGGACAGCTTCATCATGATTCTACTGTCTCCGAGTTGGATCTTGAGCTTAGATTAGGACC
TGAGCCGCAGAATTCAACTCCATCATCGGCCTCTAGTTCTACCGGTAGTACTAGGCACTTTTTTTGA
Protein sequenceShow/hide protein sequence
MEIDQQGAGCEIQDQDQEKVMNTEEQSISVNQSTARSYECIFCKRGFTNAQALGGHMNIHRKEKAKLKQSTPSSSLSLSSNKMVVDTLKMISTTPAGLPWVVSPTSRSRD
KKNSSFRSEETLIGEVQGQLHHDSTVSELDLELRLGPEPQNSTPSSASSSTGSTRHFF