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Tan0006877 (gene) of Snake gourd v1 genome

Gene IDTan0006877
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMethionyl-tRNA synthetase
Genome locationLG02:94725918..94726118
RNA-Seq ExpressionTan0006877
SyntenyTan0006877
Gene Ontology termsGO:0004812 - aminoacyl-tRNA ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029748.1 hypothetical protein SDJN02_08090, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-3293.94Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ
        MCLVFVCDEDQR+LSRQPAPGACP+CGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTR+LV+Q
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ

XP_004138769.1 uncharacterized protein LOC101206986 [Cucumis sativus]1.2e-3192.42Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ
        MCLVFVCDEDQR+LSRQPAPG CP+CGGMIQATDVESQWRFCF+PLYWKTKRKFYCTMCTR+LVMQ
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ

XP_008445081.1 PREDICTED: uncharacterized protein LOC103488227 [Cucumis melo]4.0e-3293.94Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ
        MCLVFVCDEDQR+LSRQPAPGACP+CGGMIQATDVESQWRFCF+PLYWKTKRKFYCTMCTR+LVMQ
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ

XP_022962063.1 uncharacterized protein LOC111462635 [Cucurbita moschata]5.2e-3293.94Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ
        MCLVFVCDEDQR+LSRQPAPGACP+CGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTR+LV+Q
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ

XP_038884125.1 uncharacterized protein LOC120075047 [Benincasa hispida]1.8e-3295.45Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ
        MCLVFVCDEDQR+LSRQPAPGACP+CGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTR+LVMQ
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ

TrEMBL top hitse value%identityAlignment
A0A1S3BCK8 uncharacterized protein LOC1034882271.9e-3293.94Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ
        MCLVFVCDEDQR+LSRQPAPGACP+CGGMIQATDVESQWRFCF+PLYWKTKRKFYCTMCTR+LVMQ
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ

A0A540MP26 Uncharacterized protein2.6e-2983.33Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ
        MCLVFVCDE++R+LSRQPAPGACPYCGGM+QA DVES WRFCFLPLYW+TKRKFYC++CTR+LV+Q
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ

A0A6J1HDM3 uncharacterized protein LOC1114626352.5e-3293.94Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ
        MCLVFVCDEDQR+LSRQPAPGACP+CGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTR+LV+Q
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ

A0A6J1KC13 uncharacterized protein LOC1114919252.5e-3293.94Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ
        MCLVFVCDEDQR+LSRQPAPGACP+CGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTR+LV+Q
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ

A0A6P3Z2S4 uncharacterized protein LOC1074058423.1e-3086.36Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ
        MCLVFVCDED+R++SRQPAPGACPYCGGM+QA DVESQWRFCFLPLYWKTKRKFYC++CTR LV+Q
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52855.1 unknown protein7.9e-1033.9Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMC
        +C  F+ D+ +++   +PA G C  CG      D+++  RFCF+P+YW++ R   C+ C
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMC

AT3G15534.1 unknown protein7.4e-0830.51Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMC
        +C  F+ D+ +++   +PA G C  CG   +  D+++  RFC +P+Y ++ R   C+ C
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMC

AT4G29905.1 unknown protein3.5e-1855.38Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVM
        MCL  V  E++  L RQ APG CPYCGG + A D+E++W FCFLPL +K KRK+ C+ C R LV+
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVM

AT5G10695.1 unknown protein4.0e-2260Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVM
        MCLVFVCD+D+R++ R  APGACPYCGG +Q  DV SQWRFCF+PL  K+KR+  C+ C + L++
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVM

AT5G57123.1 unknown protein2.9e-2058.46Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVM
        MCLV +CDE++  L RQ APG+CPYCGG +Q  DVE +W FCF+PL +K KRK+ C+ C R LV+
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTGGTGTTTGTGTGCGACGAGGATCAGAGGATCCTGTCGAGGCAGCCAGCACCAGGGGCATGCCCCTACTGCGGCGGCATGATCCAGGCTACCGACGTTGAAAG
CCAATGGAGGTTCTGTTTCCTTCCCCTCTACTGGAAAACCAAACGCAAGTTCTATTGCACCATGTGCACAAGAGAGCTCGTTATGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTGGTGTTTGTGTGCGACGAGGATCAGAGGATCCTGTCGAGGCAGCCAGCACCAGGGGCATGCCCCTACTGCGGCGGCATGATCCAGGCTACCGACGTTGAAAG
CCAATGGAGGTTCTGTTTCCTTCCCCTCTACTGGAAAACCAAACGCAAGTTCTATTGCACCATGTGCACAAGAGAGCTCGTTATGCAGTAG
Protein sequenceShow/hide protein sequence
MCLVFVCDEDQRILSRQPAPGACPYCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRELVMQ