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Tan0006892 (gene) of Snake gourd v1 genome

Gene IDTan0006892
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAuxin-responsive protein
Genome locationLG08:10300757..10302446
RNA-Seq ExpressionTan0006892
SyntenyTan0006892
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain
IPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586078.1 Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia]3.7e-6783.23Show/hide
Query:  MNTFHSQTQSP--AAAAAAEYFKMRRWPERRLGLPPQQQ--------AEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD---
        MNTFHS TQSP  AAAAAAEYFKMRRWPE +LG PP QQ         EEEDF AVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD   
Subjt:  MNTFHSQTQSP--AAAAAAEYFKMRRWPERRLGLPPQQQ--------AEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD---

Query:  ----GGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
            GGEPSG+R+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Subjt:  ----GGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_022938283.1 auxin-responsive protein IAA33 [Cucurbita moschata]5.9e-6580.95Show/hide
Query:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPPQQQ-----------AEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD--
        MNTFHS TQSP  AAAAEYFKMRRWPE +LG PP QQ            EEEDF AVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD  
Subjt:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPPQQQ-----------AEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD--

Query:  -----GGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
             GGEPS +R+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Subjt:  -----GGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_022969694.1 auxin-responsive protein IAA33 [Cucurbita maxima]3.4e-6884.66Show/hide
Query:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPP------QQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD-------
        MNTFHS TQSPAAAAAAEYFKMRRWPE +LG PP      QQ  EEEDF AVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD       
Subjt:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPP------QQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD-------

Query:  GGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        GGEPSG+R+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRR RGN
Subjt:  GGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_023538318.1 auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo]2.6e-6887.5Show/hide
Query:  MNTFHSQTQSP-AAAAAAEYFKMRRWPERRLGLPPQQQ-------AEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD--GGE
        MNTFHS TQSP AAAAAAEYFKMRRWPE +LG PP QQ        EEEDF AVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD  GGE
Subjt:  MNTFHSQTQSP-AAAAAAEYFKMRRWPERRLGLPPQQQ-------AEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD--GGE

Query:  PSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        PSGER+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Subjt:  PSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_038890972.1 auxin-responsive protein IAA33 [Benincasa hispida]7.7e-6585.9Show/hide
Query:  MNTFHSQ-TQSPAAAAAAEYFKMRRWPERRLGLPPQQQAE-EEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD----GGEPSGE
        MN F S+ TQSPAAAAAAE FKMRRWPERR+G P Q + E EEDF AVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDD+D    GGE SGE
Subjt:  MNTFHSQ-TQSPAAAAAAEYFKMRRWPERRLGLPPQQQAE-EEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD----GGEPSGE

Query:  RRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        R+LDLTNAVPGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRI+PVKANSRRGRGN
Subjt:  RRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

TrEMBL top hitse value%identityAlignment
A0A0A0LH98 Auxin-responsive protein3.6e-6087.5Show/hide
Query:  TQSPAAAAAAEYFKMRRWPERRLGLPPQQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG-GEPSGERRLDLTNAVPGH
        TQSPAAAAAAEYFKM RW +RR+  PPQQ   EEDF AVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVDDDD  GE SGER LDLTNAVPG+
Subjt:  TQSPAAAAAAEYFKMRRWPERRLGLPPQQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG-GEPSGERRLDLTNAVPGH

Query:  LVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        +VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGR N
Subjt:  LVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

A0A1S3BRI6 Auxin-responsive protein2.7e-6390.21Show/hide
Query:  TQSPAAAAAAEYFKMRRWPERRLGLPPQQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHL
        TQSPAAAAAAEYFKM RW ERR+G PPQQ   EEDF+AVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVDDDD GE SGERRLDLTNAVPG++
Subjt:  TQSPAAAAAAEYFKMRRWPERRLGLPPQQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHL

Query:  VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGR N
Subjt:  VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

A0A6J1DKE3 Auxin-responsive protein4.3e-5383.33Show/hide
Query:  AAAEYFKMRRWPERRLGLPPQQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG---EPSGERRLDLTNAVPGHLVAYE
        AAAEY K RRWPERR        A EED +AVIP VTVVLEGRAICQRISLHKHASYESLAKALR MFV +DDGG     SGERRLDL+NAVPGHLVAYE
Subjt:  AAAEYFKMRRWPERRLGLPPQQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG---EPSGERRLDLTNAVPGHLVAYE

Query:  DIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRG
        DIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRG
Subjt:  DIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRG

A0A6J1FIF6 Auxin-responsive protein2.9e-6580.95Show/hide
Query:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPPQQQ-----------AEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD--
        MNTFHS TQSP  AAAAEYFKMRRWPE +LG PP QQ            EEEDF AVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD  
Subjt:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPPQQQ-----------AEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD--

Query:  -----GGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
             GGEPS +R+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Subjt:  -----GGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

A0A6J1I3D9 Auxin-responsive protein1.6e-6884.66Show/hide
Query:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPP------QQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD-------
        MNTFHS TQSPAAAAAAEYFKMRRWPE +LG PP      QQ  EEEDF AVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD       
Subjt:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPP------QQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD-------

Query:  GGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        GGEPSG+R+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRR RGN
Subjt:  GGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

SwissProt top hitse value%identityAlignment
Q38830 Auxin-responsive protein IAA124.5e-0732.58Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        V V ++G  I +++ +  H+SYE+LA+ L  MF            + L L +     ++ YED E D +L GD+ W  F+   KR+RI+
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q38831 Auxin-responsive protein IAA132.0e-0732.61Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG---EPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G         + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG---EPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q69VE0 Auxin-responsive protein IAA234.1e-0829.11Show/hide
Query:  SHTKKKKRLKTMNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPP----QQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMF---
        S T   +R +  +  H+  + P+  A            R +G PP    ++ A  ED +A    V V ++G    +++ L  HA Y  L +AL  MF   
Subjt:  SHTKKKKRLKTMNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPP----QQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMF---

Query:  --VDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
          V    GG+  G + +DL      ++  YED + D +L GD+ W  FV   KRIR++
Subjt:  --VDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q6K846 Auxin-responsive protein IAA93.3e-1037.93Show/hide
Query:  RRWPERRLGLPPQQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGD
        RR  +  +G PP   A      A    V V  EG AI +++ L  H+SY+ LA  L RMF  +D  GE   +   D      G +V YED + D +L GD
Subjt:  RRWPERRLGLPPQQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGD

Query:  LNWNDFVRVAKRIRIL
        + W+DF R  KR++IL
Subjt:  LNWNDFVRVAKRIRIL

Q9FKM7 Auxin-responsive protein IAA331.2e-3667.86Show/hide
Query:  EEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD  D  +      LDL+NA+PGHL+AYED+ENDLLLAGDL W DFVRVAKRIRIL
Subjt:  EEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Query:  PVKANSRRGRGN
        PVK N+R+ + N
Subjt:  PVKANSRRGRGN

Arabidopsis top hitse value%identityAlignment
AT1G04550.2 AUX/IAA transcriptional regulator family protein3.2e-0832.58Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        V V ++G  I +++ +  H+SYE+LA+ L  MF            + L L +     ++ YED E D +L GD+ W  F+   KR+RI+
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT2G33310.1 auxin-induced protein 131.4e-0832.61Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG---EPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G         + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG---EPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT2G33310.2 auxin-induced protein 131.4e-0832.61Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG---EPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G         + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG---EPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT2G33310.3 auxin-induced protein 131.4e-0832.61Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG---EPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G         + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG---EPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT5G57420.1 indole-3-acetic acid inducible 338.6e-3867.86Show/hide
Query:  EEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD  D  +      LDL+NA+PGHL+AYED+ENDLLLAGDL W DFVRVAKRIRIL
Subjt:  EEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Query:  PVKANSRRGRGN
        PVK N+R+ + N
Subjt:  PVKANSRRGRGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATATATGCTTCTTTTTTCTTCACCAAACAAATCCATTTTCCTATTTCTCTCTCTCTCTCTTAAAATCTCACACACAAAAAAAAAAAAAAGATTAAAAACCATGAA
CACCTTCCACTCTCAAACACAATCCCCTGCCGCCGCCGCCGCCGCCGAGTACTTCAAGATGAGGCGGTGGCCGGAGAGGCGACTGGGTCTACCGCCGCAGCAGCAGGCCG
AGGAGGAGGATTTTACGGCGGTGATTCCGCCGGTGACGGTAGTGCTGGAAGGGAGGGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTTGCC
AAAGCCCTCAGACGGATGTTCGTCGACGATGATGACGGCGGCGAACCCTCCGGCGAGCGGCGGCTAGACCTGACCAACGCCGTTCCCGGTCATCTTGTTGCTTATGAAGA
TATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAATTGGAATGATTTTGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAGGAGGGGAAGAG
GAAATTAA
mRNA sequenceShow/hide mRNA sequence
GTTCTCTCTCTCTAAAAACCATTTTTTCCCTCTCTCTCTCTAAAAACAACCATTTTTTCTCTCTCTAAAAAAACCATTTTTTTCTCTCTCTTCGTATCCATATATGAAAT
ATATGCTTCTTTTTTCTTCACCAAACAAATCCATTTTCCTATTTCTCTCTCTCTCTCTTAAAATCTCACACACAAAAAAAAAAAAAAGATTAAAAACCATGAACACCTTC
CACTCTCAAACACAATCCCCTGCCGCCGCCGCCGCCGCCGAGTACTTCAAGATGAGGCGGTGGCCGGAGAGGCGACTGGGTCTACCGCCGCAGCAGCAGGCCGAGGAGGA
GGATTTTACGGCGGTGATTCCGCCGGTGACGGTAGTGCTGGAAGGGAGGGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTTGCCAAAGCCC
TCAGACGGATGTTCGTCGACGATGATGACGGCGGCGAACCCTCCGGCGAGCGGCGGCTAGACCTGACCAACGCCGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAA
AATGATCTTCTTCTTGCTGGTGATCTCAATTGGAATGATTTTGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAGGAGGGGAAGAGGAAATTA
AATTAATAGATGTGTTAATTACATATTTTACGAGAGGCA
Protein sequenceShow/hide protein sequence
MKYMLLFSSPNKSIFLFLSLSLKISHTKKKKRLKTMNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPPQQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLA
KALRRMFVDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN