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Tan0006901 (gene) of Snake gourd v1 genome

Gene IDTan0006901
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGlycine-rich protein family
Genome locationLG05:7734869..7737707
RNA-Seq ExpressionTan0006901
SyntenyTan0006901
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G35660.1 Glycine-rich protein family3.2e-0534.61Show/hide
Query:  MKSKAVVFACLLLFVSVAVIASALSEGNQQQPEK-VEATKETQVEESKQRCHYGCCRYYGHRCVKCCGGGAEAQANNNNNNNNAVQERQVEEATLHKWGG
        M +K  +   LL+   V  +A+  S  +++Q EK VE        ++K   + G               G EA       NN  + +             
Subjt:  MKSKAVVFACLLLFVSVAVIASALSEGNQQQPEK-VEATKETQVEESKQRCHYGCCRYYGHRCVKCCGGGAEAQANNNNNNNNAVQERQVEEATLHKWGG

Query:  GHGGWKGGGGGHGGWGGGGGGHGRGGAEAQANTNTNNNAQQEHQVEEATPHKWGGGH-GGWKGGGGH-GGWGGGGGGHGRGGAEAQANTNTNNNAQQERQ
          GGWKGGGG  GGW  GGGGHG G                          K GGGH GGWKGGGGH GGW GGGGG G GG           ++  +  
Subjt:  GHGGWKGGGGGHGGWGGGGGGHGRGGAEAQANTNTNNNAQQEHQVEEATPHKWGGGH-GGWKGGGGH-GGWGGGGGGHGRGGAEAQANTNTNNNAQQERQ

Query:  VEEATPHKWGGDHGGWKGGGGHGGWGGGGGGHGRGEHQVEEATPHKWGGGH-GGWKAAADTVDGVAAVATHGRGGAAQANTNTNNNAQQERQVEEATPHK
        V+       GG  GGWK GGG GG   GGGG G G          K GGG  GGWK               G+GG  +                      
Subjt:  VEEATPHKWGGDHGGWKGGGGHGGWGGGGGGHGRGEHQVEEATPHKWGGGH-GGWKAAADTVDGVAAVATHGRGGAAQANTNTNNNAQQERQVEEATPHK

Query:  WGGGHGGWKGGGGH-GGWGGGGGGHGRGGAEAQANTNTNNNAQQEHQVEEATPHKWGGGHGGWKGGGGHGGWGGGGGGHGRGEATPHKWGGGHGGWKAAA
         GG  GGWKGGGG  GGW GGGG  G GG  A+      N A +E Q        W GG     GGG  GGW GGGGGHG                    
Subjt:  WGGGHGGWKGGGGH-GGWGGGGGGHGRGGAEAQANTNTNNNAQQEHQVEEATPHKWGGGHGGWKGGGGHGGWGGGGGGHGRGEATPHKWGGGHGGWKAAA

Query:  DTGGWGGGGGGHGRGGAEAQANTNTNNNAQQERQVEEATPHKWGGGHGGWKGGGGH-GGWSGGHSGVGAEVQANTKTNTNNNNNAQQERQVEEATPHKWG
          GGW GGGGGHG G                            GG  GGWKGGGGH GGW GG    G                             K G
Subjt:  DTGGWGGGGGGHGRGGAEAQANTNTNNNAQQERQVEEATPHKWGGGHGGWKGGGGH-GGWSGGHSGVGAEVQANTKTNTNNNNNAQQERQVEEATPHKWG

Query:  GGHGGWKGGGGHGGWRGGGGHGG
        GG GGW+GGGG GGWRGGGG GG
Subjt:  GGHGGWKGGGGHGGWRGGGGHGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCAAAAGCTGTCGTGTTTGCGTGTCTGTTGTTGTTTGTGTCTGTGGCGGTAATTGCGTCGGCACTGTCCGAAGGAAATCAACAACAGCCTGAGAAAGTTGAAGC
TACAAAGGAAACTCAAGTTGAAGAATCAAAGCAACGTTGCCACTATGGATGCTGCCGCTATTATGGACATCGCTGCGTGAAATGCTGCGGAGGTGGTGCAGAAGCGCAGG
CCAATAACAATAATAATAATAATAATGCAGTACAGGAGCGTCAAGTTGAAGAAGCAACCCTGCATAAGTGGGGAGGAGGCCACGGTGGATGGAAGGGCGGCGGCGGCGGA
CACGGTGGATGGGGTGGCGGCGGTGGCGGACACGGTAGAGGTGGTGCAGAAGCGCAAGCCAATACCAATACCAATAATAATGCACAACAGGAGCATCAAGTTGAAGAAGC
AACCCCACATAAGTGGGGAGGAGGCCACGGTGGATGGAAGGGCGGCGGCGGACACGGTGGATGGGGTGGCGGCGGTGGCGGACACGGTAGAGGTGGTGCAGAAGCGCAAG
CCAATACCAATACCAATAATAATGCACAACAGGAGCGTCAAGTTGAAGAAGCAACCCCACATAAGTGGGGAGGAGACCACGGTGGATGGAAGGGCGGCGGCGGACACGGT
GGATGGGGTGGCGGCGGTGGCGGACACGGTAGAGGTGAGCATCAAGTTGAAGAAGCAACCCCACATAAGTGGGGAGGAGGCCACGGTGGATGGAAGGCGGCGGCGGACAC
GGTGGATGGGGTGGCGGCGGTGGCGACACACGGTAGAGGTGGTGCGGCGCAAGCCAATACCAATACCAATAATAATGCACAACAGGAGCGTCAAGTTGAAGAAGCAACCC
CACATAAGTGGGGAGGAGGCCACGGTGGATGGAAGGGCGGCGGCGGACACGGTGGATGGGGTGGCGGCGGTGGCGGACACGGTAGAGGTGGTGCAGAAGCGCAAGCCAAT
ACCAATACCAATAATAATGCACAACAGGAGCATCAAGTTGAAGAAGCAACCCCACATAAGTGGGGAGGAGGCCACGGTGGATGGAAGGGCGGCGGCGGACACGGTGGATG
GGGTGGCGGCGGTGGCGGACACGGTAGAGGTGAAGCAACCCCACATAAGTGGGGAGGAGGCCACGGTGGATGGAAGGCGGCGGCGGACACGGGTGGATGGGGTGGCGGCG
GTGGCGGACACGGTAGAGGTGGTGCAGAAGCGCAAGCCAATACCAATACCAATAATAATGCACAACAGGAGCGTCAAGTTGAAGAAGCAACCCCACATAAGTGGGGAGGA
GGTCACGGTGGATGGAAGGGCGGTGGCGGACACGGTGGATGGAGTGGCGGACATAGTGGAGTTGGTGCAGAAGTGCAAGCCAATACCAAGACCAATACCAATAATAATAA
TAATGCACAACAAGAGCGTCAAGTTGAAGAAGCAACCCCACATAAATGGGGAGGAGGCCACGGTGGATGGAAGGGTGGCGGCGGACACGGGGGATGGAGGGGCGGTGGCG
GACACGGTGGAGGTGGACAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCAAAAGCTGTCGTGTTTGCGTGTCTGTTGTTGTTTGTGTCTGTGGCGGTAATTGCGTCGGCACTGTCCGAAGGAAATCAACAACAGCCTGAGAAAGTTGAAGC
TACAAAGGAAACTCAAGTTGAAGAATCAAAGCAACGTTGCCACTATGGATGCTGCCGCTATTATGGACATCGCTGCGTGAAATGCTGCGGAGGTGGTGCAGAAGCGCAGG
CCAATAACAATAATAATAATAATAATGCAGTACAGGAGCGTCAAGTTGAAGAAGCAACCCTGCATAAGTGGGGAGGAGGCCACGGTGGATGGAAGGGCGGCGGCGGCGGA
CACGGTGGATGGGGTGGCGGCGGTGGCGGACACGGTAGAGGTGGTGCAGAAGCGCAAGCCAATACCAATACCAATAATAATGCACAACAGGAGCATCAAGTTGAAGAAGC
AACCCCACATAAGTGGGGAGGAGGCCACGGTGGATGGAAGGGCGGCGGCGGACACGGTGGATGGGGTGGCGGCGGTGGCGGACACGGTAGAGGTGGTGCAGAAGCGCAAG
CCAATACCAATACCAATAATAATGCACAACAGGAGCGTCAAGTTGAAGAAGCAACCCCACATAAGTGGGGAGGAGACCACGGTGGATGGAAGGGCGGCGGCGGACACGGT
GGATGGGGTGGCGGCGGTGGCGGACACGGTAGAGGTGAGCATCAAGTTGAAGAAGCAACCCCACATAAGTGGGGAGGAGGCCACGGTGGATGGAAGGCGGCGGCGGACAC
GGTGGATGGGGTGGCGGCGGTGGCGACACACGGTAGAGGTGGTGCGGCGCAAGCCAATACCAATACCAATAATAATGCACAACAGGAGCGTCAAGTTGAAGAAGCAACCC
CACATAAGTGGGGAGGAGGCCACGGTGGATGGAAGGGCGGCGGCGGACACGGTGGATGGGGTGGCGGCGGTGGCGGACACGGTAGAGGTGGTGCAGAAGCGCAAGCCAAT
ACCAATACCAATAATAATGCACAACAGGAGCATCAAGTTGAAGAAGCAACCCCACATAAGTGGGGAGGAGGCCACGGTGGATGGAAGGGCGGCGGCGGACACGGTGGATG
GGGTGGCGGCGGTGGCGGACACGGTAGAGGTGAAGCAACCCCACATAAGTGGGGAGGAGGCCACGGTGGATGGAAGGCGGCGGCGGACACGGGTGGATGGGGTGGCGGCG
GTGGCGGACACGGTAGAGGTGGTGCAGAAGCGCAAGCCAATACCAATACCAATAATAATGCACAACAGGAGCGTCAAGTTGAAGAAGCAACCCCACATAAGTGGGGAGGA
GGTCACGGTGGATGGAAGGGCGGTGGCGGACACGGTGGATGGAGTGGCGGACATAGTGGAGTTGGTGCAGAAGTGCAAGCCAATACCAAGACCAATACCAATAATAATAA
TAATGCACAACAAGAGCGTCAAGTTGAAGAAGCAACCCCACATAAATGGGGAGGAGGCCACGGTGGATGGAAGGGTGGCGGCGGACACGGGGGATGGAGGGGCGGTGGCG
GACACGGTGGAGGTGGACAGTGA
Protein sequenceShow/hide protein sequence
MKSKAVVFACLLLFVSVAVIASALSEGNQQQPEKVEATKETQVEESKQRCHYGCCRYYGHRCVKCCGGGAEAQANNNNNNNNAVQERQVEEATLHKWGGGHGGWKGGGGG
HGGWGGGGGGHGRGGAEAQANTNTNNNAQQEHQVEEATPHKWGGGHGGWKGGGGHGGWGGGGGGHGRGGAEAQANTNTNNNAQQERQVEEATPHKWGGDHGGWKGGGGHG
GWGGGGGGHGRGEHQVEEATPHKWGGGHGGWKAAADTVDGVAAVATHGRGGAAQANTNTNNNAQQERQVEEATPHKWGGGHGGWKGGGGHGGWGGGGGGHGRGGAEAQAN
TNTNNNAQQEHQVEEATPHKWGGGHGGWKGGGGHGGWGGGGGGHGRGEATPHKWGGGHGGWKAAADTGGWGGGGGGHGRGGAEAQANTNTNNNAQQERQVEEATPHKWGG
GHGGWKGGGGHGGWSGGHSGVGAEVQANTKTNTNNNNNAQQERQVEEATPHKWGGGHGGWKGGGGHGGWRGGGGHGGGGQ