; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0006915 (gene) of Snake gourd v1 genome

Gene IDTan0006915
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING-type domain-containing protein
Genome locationLG01:28097214..28098320
RNA-Seq ExpressionTan0006915
SyntenyTan0006915
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052944.1 E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa]8.2e-4668.15Show/hide
Query:  MVLNNVYFFFYNNLIRFRGRP-RLKHATPLL---DSSLRPRVKSKEESMTPDDC--VALSSPEKALQGETCCVCLSSI-----DRDKEEGIEMSVLPCLH
        MV N V+FFFYNN I FR RP R K ATPL    +SSLRP        M  DDC  +ALSS EKAL+GETCCVCLSS+     D DK  G   SVLPCLH
Subjt:  MVLNNVYFFFYNNLIRFRGRP-RLKHATPLL---DSSLRPRVKSKEESMTPDDC--VALSSPEKALQGETCCVCLSSI-----DRDKEEGIEMSVLPCLH

Query:  EFHKVCIDRWFEECRRTCPICRYSM-GGGESTHENGT-QILTDEMVIWFSSFHTSGF
        EFHKVC++RWFEECRRTCPICRYSM GGG  +HE+ T QILTDEMVIWFSSFHTSGF
Subjt:  EFHKVCIDRWFEECRRTCPICRYSM-GGGESTHENGT-QILTDEMVIWFSSFHTSGF

KAE8649999.1 hypothetical protein Csa_010276, partial [Cucumis sativus]4.3e-4768.71Show/hide
Query:  VYFFFYNNLIRFRGRPRLKHATPLL---DSSLRPRVKSKEESMTPDDC--VALSSPEKALQGETCCVCLSSI---DRDKEEGIEMSVLPCLHEFHKVCID
        V+FFFYNNLI FR RPR K ATPL    +SSLRP        +  DDC  +ALSS EKAL+GETCCVCLSS+   DRD ++G+  SVLPCLHEFHKVC++
Subjt:  VYFFFYNNLIRFRGRPRLKHATPLL---DSSLRPRVKSKEESMTPDDC--VALSSPEKALQGETCCVCLSSI---DRDKEEGIEMSVLPCLHEFHKVCID

Query:  RWFEECRRTCPICRYSMGGGESTHENGTQILTDEMVIWFSSFHTSGF
        RWFEECRRTCPICRYSM GG S  +   QILTDEMVIWFSSFHTSGF
Subjt:  RWFEECRRTCPICRYSMGGGESTHENGTQILTDEMVIWFSSFHTSGF

KAG6577791.1 Protein goliath, partial [Cucurbita argyrosperma subsp. sororia]1.3e-5171.33Show/hide
Query:  MVLNNVYFFFYNNLIRFRGRPRLKHATPL---LDSSLRPRVKSKEESMTPDDCV-ALSSPEKALQGETCCVCLSSI-DRDKEEGIEMSVLPCLHEFHKVC
        MV N ++FFFYNNLI FR  P LK ATPL    DSSLRP        MTPDDCV ALSSPEKAL+GETCCVCLS + ++DK+EGI  SVLPC HEFHK+C
Subjt:  MVLNNVYFFFYNNLIRFRGRPRLKHATPL---LDSSLRPRVKSKEESMTPDDCV-ALSSPEKALQGETCCVCLSSI-DRDKEEGIEMSVLPCLHEFHKVC

Query:  IDRWFEECRRTCPICRYSMGGGESTHENGT-QILTDEMVIWFSSFHTSGF
        +DRWFEECRRTCPICRYSM GG + HE+G+ ++LTDEMVIWFSSFHTSGF
Subjt:  IDRWFEECRRTCPICRYSMGGGESTHENGT-QILTDEMVIWFSSFHTSGF

KAG7015830.1 Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-5170.67Show/hide
Query:  MVLNNVYFFFYNNLIRFRGRPRLKHATPL---LDSSLRPRVKSKEESMTPDDCV-ALSSPEKALQGETCCVCLSSI-DRDKEEGIEMSVLPCLHEFHKVC
        MV N ++FFFYNNLI FR  P LK ATPL    DSSLRP         TPDDCV ALSSPEKAL+GETCCVCLS + ++DK+EGI  SVLPC HEFHK+C
Subjt:  MVLNNVYFFFYNNLIRFRGRPRLKHATPL---LDSSLRPRVKSKEESMTPDDCV-ALSSPEKALQGETCCVCLSSI-DRDKEEGIEMSVLPCLHEFHKVC

Query:  IDRWFEECRRTCPICRYSMGGGESTHENGT-QILTDEMVIWFSSFHTSGF
        +DRWFEECRRTCPICRYSM GG + HE+G+ ++LTDEMVIWFSSFHTSGF
Subjt:  IDRWFEECRRTCPICRYSMGGGESTHENGT-QILTDEMVIWFSSFHTSGF

XP_038906276.1 E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida]6.0e-4970.32Show/hide
Query:  MVLNNVYFFFYNNLIRFRGRPRLKHATPLL---DSSLRPRVKSKEESMTPDDC--VALSSPEKALQGETCCVCLSSI-----DRDKEEGIEMSVLPCLHE
        MV N V+FFFYNN + FR R R K ATPL    + SLRP        +TPDDC  V LSSPEKAL+GETCCVCLSS+     DRDK  G   SVLPCLHE
Subjt:  MVLNNVYFFFYNNLIRFRGRPRLKHATPLL---DSSLRPRVKSKEESMTPDDC--VALSSPEKALQGETCCVCLSSI-----DRDKEEGIEMSVLPCLHE

Query:  FHKVCIDRWFEECRRTCPICRYSMGGGESTHENGT-QILTDEMVIWFSSFHTSGF
        FHKVC+DRWFEECRRTCPICRYSM GG S HE+GT QILTDEMVIWFSSFHTSGF
Subjt:  FHKVCIDRWFEECRRTCPICRYSMGGGESTHENGT-QILTDEMVIWFSSFHTSGF

TrEMBL top hitse value%identityAlignment
A0A0A0L4W7 RING-type domain-containing protein5.0e-4967.76Show/hide
Query:  MVLNNVYFFFYNNLIRFRGRPRLKHATPLL---DSSLRPRVKSKEESMTPDDC--VALSSPEKALQGETCCVCLSSI---DRDKEEGIEMSVLPCLHEFH
        M+ N V+FFFYNNLI FR RPR K ATPL    +SSLRP        +  DDC  +ALSS EKAL+GETCCVCLSS+   DRD ++G+  SVLPCLHEFH
Subjt:  MVLNNVYFFFYNNLIRFRGRPRLKHATPLL---DSSLRPRVKSKEESMTPDDC--VALSSPEKALQGETCCVCLSSI---DRDKEEGIEMSVLPCLHEFH

Query:  KVCIDRWFEECRRTCPICRYSMGGGESTHENGTQILTDEMVIWFSSFHTSGF
        KVC++RWFEECRRTCPICRYSM GG S  +   QILTDEMVIWFSSFHTSGF
Subjt:  KVCIDRWFEECRRTCPICRYSMGGGESTHENGTQILTDEMVIWFSSFHTSGF

A0A5D3CJ45 E3 ubiquitin-protein ligase RNF134.0e-4668.15Show/hide
Query:  MVLNNVYFFFYNNLIRFRGRP-RLKHATPLL---DSSLRPRVKSKEESMTPDDC--VALSSPEKALQGETCCVCLSSI-----DRDKEEGIEMSVLPCLH
        MV N V+FFFYNN I FR RP R K ATPL    +SSLRP        M  DDC  +ALSS EKAL+GETCCVCLSS+     D DK  G   SVLPCLH
Subjt:  MVLNNVYFFFYNNLIRFRGRP-RLKHATPLL---DSSLRPRVKSKEESMTPDDC--VALSSPEKALQGETCCVCLSSI-----DRDKEEGIEMSVLPCLH

Query:  EFHKVCIDRWFEECRRTCPICRYSM-GGGESTHENGT-QILTDEMVIWFSSFHTSGF
        EFHKVC++RWFEECRRTCPICRYSM GGG  +HE+ T QILTDEMVIWFSSFHTSGF
Subjt:  EFHKVCIDRWFEECRRTCPICRYSM-GGGESTHENGT-QILTDEMVIWFSSFHTSGF

A0A6J1CW69 E3 ubiquitin-protein ligase SDIR1-like3.3e-4570.95Show/hide
Query:  MVLNNVYFFFYNNLIRFRGRPRLKHATPLL---DSSLRPRVKSKEESMTPDDCVALSSPEKALQGE-TCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCI
        MV N V+FFFY N I FRGRP+LK  T L    DS+LR  V  ++ES  P DCV LSS  KAL+GE  CCVCLSSI    EEGIE SVLPCLHEFHKVC+
Subjt:  MVLNNVYFFFYNNLIRFRGRPRLKHATPLL---DSSLRPRVKSKEESMTPDDCVALSSPEKALQGE-TCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCI

Query:  DRWFEECRRTCPICRYSMGGGESTHENGTQILTDEMVIWFSSFHTSGF
        DRWFEE RRTCPICRYSM G    +ENGTQILTDEMVIWFSSFHTSGF
Subjt:  DRWFEECRRTCPICRYSMGGGESTHENGTQILTDEMVIWFSSFHTSGF

A0A6P5YMH3 receptor homology region, transmembrane domain- and RING domain-containing protein 6-like8.6e-2544.52Show/hide
Query:  MVLNNVYFFFYNNLIRFRGRPRLKHATPLLDSSLRPRVKSK--EESMTPDDCVALSSPEKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDR
        MVLN +  F   NLI  R   R+K A      +++P +     +E    +    LS  E + +GE CCVCLSS+    EEG +M VLPCLH FH+VC+DR
Subjt:  MVLNNVYFFFYNNLIRFRGRPRLKHATPLLDSSLRPRVKSK--EESMTPDDCVALSSPEKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDR

Query:  WFEECRRTCPICRYSMGGGESTHENGTQILTDEMVIWFSSFHTSGF
        W   CR+ CP+CR+SMG  E  H    +  T+EM+ WFSSFH +GF
Subjt:  WFEECRRTCPICRYSMGGGESTHENGTQILTDEMVIWFSSFHTSGF

A0A7N2R4T7 RING-type domain-containing protein4.5e-2644.97Show/hide
Query:  MVLNNVYFFFYNNLI----RFRGRPRLKHATPLLDSSLRPRVKSKEESMTPDDCVALSSPEKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCI
        MV   +  F YN+LI      R +P    A  LL              ++ D+       E  ++GE CCVCLS + + +E   EM  LPCLHEFHK+C+
Subjt:  MVLNNVYFFFYNNLI----RFRGRPRLKHATPLLDSSLRPRVKSKEESMTPDDCVALSSPEKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCI

Query:  DRWFEE-CRRTCPICRYSMGGGESTHENGTQILTDEMVIWFSSFHTSGF
        DRWF   CR+TCP+CR+SMGG +  H    Q+LTDEMVIWFSSFH +GF
Subjt:  DRWFEE-CRRTCPICRYSMGGGESTHENGTQILTDEMVIWFSSFHTSGF

SwissProt top hitse value%identityAlignment
Q4R6Y5 E3 ubiquitin-protein ligase ZNRF42.0e-1037.5Show/hide
Query:  QGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEEC-RRTCPICRYSMGGGESTHENGTQILTDE
        + + C +CL     + EEG ++ +LPC H +H  CID WF +  RR+CP+C+ S+ G E + ++ T   +DE
Subjt:  QGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEEC-RRTCPICRYSMGGGESTHENGTQILTDE

Q5XIL0 E3 ubiquitin-protein ligase RNF1671.4e-0834.72Show/hide
Query:  EKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRRTCPICRYSM--GGGESTHENGTQ
        +K  + + C +CL     + E+G ++ +LPC H +H  C+D W  + R+TCPIC+  +  G G+   E  TQ
Subjt:  EKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRRTCPICRYSM--GGGESTHENGTQ

Q8BP31 RING finger protein 1227.0e-0840Show/hide
Query:  VALSSPEKALQ--GETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRRTCPICRYSMGGGESTHENGTQILTDEMV
        V L    K LQ  G+TC VCL     D +   E+ VLPC H FH+ C+ +W  E R  CP+C   + G   T ++   IL DE+V
Subjt:  VALSSPEKALQ--GETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRRTCPICRYSMGGGESTHENGTQILTDEMV

Q91XF4 E3 ubiquitin-protein ligase RNF1671.1e-0836.11Show/hide
Query:  EKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRRTCPICRYSM--GGGESTHENGTQ
        +K  + + C +CL     + E+G ++ VLPC H +H  C+D W  + R+TCPIC+  +  G G+   E  TQ
Subjt:  EKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRRTCPICRYSM--GGGESTHENGTQ

Q9H6Y7 E3 ubiquitin-protein ligase RNF1674.9e-0937.5Show/hide
Query:  EKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRRTCPICRYSM--GGGESTHENGTQ
        +K  Q + C +CL     + E+G ++ VLPC H +H  C+D W  + R+TCPIC+  +  G G+   E  TQ
Subjt:  EKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRRTCPICRYSM--GGGESTHENGTQ

Arabidopsis top hitse value%identityAlignment
AT1G35630.1 Protease-associated (PA) RING/U-box zinc finger family protein5.5e-0838.18Show/hide
Query:  EKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRRTCPICR
        E++    TC +C+     D   G ++ +LPC H++H VCID W   CR  CP+C+
Subjt:  EKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRRTCPICR

AT3G51325.1 RING/U-box superfamily protein4.8e-1243.04Show/hide
Query:  ETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRR-TCPICRYSMGGGESTHENGTQILTDEMVIWFSSFH
        E C VCL  +    E    +  LPC HEFH +C+D WF   R+  CP+CR+S           T +LTDE+++WFSSFH
Subjt:  ETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRR-TCPICRYSMGGGESTHENGTQILTDEMVIWFSSFH

AT4G11680.1 Zinc finger, C3HC4 type (RING finger) family protein4.2e-0838.24Show/hide
Query:  DCVALSSPEKALQGE--TCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRRTCPICRYSM
        +C   S  E++L  E   CC+CL     + E+G+E+  LPC H FH  CID+W     R CP+C++++
Subjt:  DCVALSSPEKALQGE--TCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRRTCPICRYSM

AT5G45290.1 RING/U-box superfamily protein7.7e-1034.78Show/hide
Query:  HATPLLDSSLRPRVKSKEESMTPDDCV-----ALSSPEKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRRTCPICR
        H   ++ SS +P V S      P+D V      L +  ++     C +CL     + EE   +  LPC HEFHK C+D+W +E  R CP+CR
Subjt:  HATPLLDSSLRPRVKSKEESMTPDDCV-----ALSSPEKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRRTCPICR

AT5G45290.2 RING/U-box superfamily protein1.9e-0834.41Show/hide
Query:  HATPLLDSSLRPRVKSKEESMTPDDCV-----ALSSPEKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECR-RTCPICR
        H   ++ SS +P V S      P+D V      L +  ++     C +CL     + EE   +  LPC HEFHK C+D+W +E   R CP+CR
Subjt:  HATPLLDSSLRPRVKSKEESMTPDDCV-----ALSSPEKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECR-RTCPICR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTCAACAACGTCTACTTCTTCTTCTACAACAACCTCATCCGCTTCCGAGGCAGGCCGAGACTCAAGCATGCAACCCCGCTTCTTGATTCGAGCCTTCGACCAAG
GGTGAAGTCGAAGGAGGAGTCTATGACACCTGATGATTGTGTAGCTCTTTCGAGTCCCGAGAAGGCGTTGCAGGGCGAGACATGTTGCGTATGCTTGTCGAGTATAGACC
GAGACAAGGAGGAGGGGATTGAAATGAGTGTTCTTCCTTGCTTGCATGAGTTTCATAAGGTATGTATCGATCGTTGGTTCGAAGAGTGTCGGAGAACTTGTCCGATATGT
CGATATTCGATGGGAGGAGGAGAGAGTACTCATGAGAATGGGACTCAGATACTCACAGATGAGATGGTTATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
GTCAAGAGTAACTCTCCTGTTTAGGTGCCAACCGCTTTGTGTATGACTCTTTACAATCCTCCTCCTTCTTCTTCTTCACCAATCCAACAACTCTTCTATCCCACGCAAGA
TACCTGAAACATACCAAATTTACTCTCTTCCATTAAAAACATCAACCTGATCATGAATTCCAATTCTCTTCATTGATGACAAATGGTTCTCAACAACGTCTACTTCTTCT
TCTACAACAACCTCATCCGCTTCCGAGGCAGGCCGAGACTCAAGCATGCAACCCCGCTTCTTGATTCGAGCCTTCGACCAAGGGTGAAGTCGAAGGAGGAGTCTATGACA
CCTGATGATTGTGTAGCTCTTTCGAGTCCCGAGAAGGCGTTGCAGGGCGAGACATGTTGCGTATGCTTGTCGAGTATAGACCGAGACAAGGAGGAGGGGATTGAAATGAG
TGTTCTTCCTTGCTTGCATGAGTTTCATAAGGTATGTATCGATCGTTGGTTCGAAGAGTGTCGGAGAACTTGTCCGATATGTCGATATTCGATGGGAGGAGGAGAGAGTA
CTCATGAGAATGGGACTCAGATACTCACAGATGAGATGGTTATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGAGCTCTTTTGGTTTGTTTAATCTTCCAAAAGCAC
TTCAAGCTTGGCAATGCTTCCTTTTGAGATCCCAACCAGGTAAAATCAATATGATTTGACTAAATGCCAGTTGGATGGCTCTAGCTTCACAATATCACTATATTGAGTTG
ATCGTTTTCTTCTTTTAAAATAAAGTTTTTTTTGTACATAAGTTTAAAGAAGTGGAACCATTCAAATTCATGTCTAATCTAATCTGTTCATGTAAGGGTGGGGAGATCAT
AAGCTAAAATTCCCAACTTTTTAAAGCAATTATGCCATTGATTTAGTGGCTAATATGAATGAAAGTCACTGATAATTAGCAAAGGAAGGAAAGAAGCACTCCAATTTTGC
AGCCAGTAAAAGTGGTTTACCAACCCCCAATTTTTTTAAACCCATAAGTGGTTGGGCCTGTAAAATGGCCCCACATTATGACATCATCTTAGCAACCCCATGGTTGATTT
TATAGGC
Protein sequenceShow/hide protein sequence
MVLNNVYFFFYNNLIRFRGRPRLKHATPLLDSSLRPRVKSKEESMTPDDCVALSSPEKALQGETCCVCLSSIDRDKEEGIEMSVLPCLHEFHKVCIDRWFEECRRTCPIC
RYSMGGGESTHENGTQILTDEMVIWFSSFHTSGF