; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0006933 (gene) of Snake gourd v1 genome

Gene IDTan0006933
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGlycine-rich RNA-binding family protein
Genome locationLG11:7485616..7489944
RNA-Seq ExpressionTan0006933
SyntenyTan0006933
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602289.1 Glycine-rich RNA-binding protein RZ1C, partial [Cucurbita argyrosperma subsp. sororia]3.1e-15395.16Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG
        MAAKDEYRIFVGGLSWNVSER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG

Query:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN
        YSSGGRA FGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD D RGDRF GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYG+
Subjt:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN

Query:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPSAGDR+AGGDRYDVSDRYPQNGY KDRGGYDRDIGPR+GSDRYG+ GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

XP_022133790.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia]1.6e-14692.36Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG
        MA KDEYRIFVGGLSWN+SERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG

Query:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN
        YSSGGR  FGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSD RGDRF GDRDRYVDDRY    DGGRYGDRD FDRRDDKYG+
Subjt:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN

Query:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPS GDR+AGGDRYDVSDRYPQNGY KDRGGY+RDIGPR+GSDRYGSGGPGRYEGRSYRDR GPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

XP_022961758.1 glycine-rich RNA-binding protein RZ1C-like [Cucurbita moschata]8.9e-15394.81Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG
        MAAKDEYRIFVGGLSWNVSER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG

Query:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN
        YSSGGRA FGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD D RGDRF GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYG+
Subjt:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN

Query:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPSAGDR+ GGDRYDVSDRYPQNGY KDRGGYDRDIGPR+GSDRYG+ GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

XP_022990423.1 glycine-rich RNA-binding protein RZ1C [Cucurbita maxima]6.9e-15394.81Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG
        MAAKDEYRIFVGGLSWNVSER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG

Query:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN
        YSSGGRA FGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD D RGDRF GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYG+
Subjt:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN

Query:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPSAGDR+AGGDRYDVSDRYPQNGY KDRGGYDRDIGPR+GSDRYG+ GGPGRYEGR+YRDRPGPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

XP_023544240.1 glycine-rich RNA-binding protein RZ1C [Cucurbita pepo subsp. pepo]2.6e-15294.46Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG
        MAAKDEYRIFVGGLSWNVSER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG

Query:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN
        YSSGGRA FGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD D RGDRF GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYG+
Subjt:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN

Query:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYF+DRYPSAGDR+AGGDRYDVSDRYPQNGY K+RGGYDRDIGPR+GSDRYG+ GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

TrEMBL top hitse value%identityAlignment
A0A0A0LQB5 Uncharacterized protein5.5e-14089.58Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG
        MA+KDEYRIFVGGLSWN+SERQLENAF R+GK+LETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GERIISVNKAEPKMEGDDTE GFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG

Query:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN
        YSSGGRA FGRG DRSVGQDECFKCGRPGHWARDCPSVGGGRG GRGSFSSRSRFDSDGRGDRF GDRDRYVD+RY    +GGRYGDRDRFDRRDDKYG+
Subjt:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN

Query:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPSAGDR+ G DRYDVSDRYPQNGY KDR  YDRDIGPR+GSDRYGSGGPGR+EGRSYRDR GPYDRPSR GRPSSY+RY
Subjt:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

A0A6J1BW59 glycine-rich RNA-binding protein RZ1C-like isoform X21.5e-12492Show/hide
Query:  MLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGGYSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSV
        MLERDTGRPRGFGFITFADRRGMDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRGGGYSSGGR  FGRGGDRSVGQDECFKCGRPGHWARDCPSV
Subjt:  MLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGGYSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSV

Query:  GGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGNRDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRG
        GGGRGRGRGSFSSRSRFDSD RGDRF GDRDRYVDDRY    DGGRYGDRD FDRRDDKYG+RDRYFDDRYPS GDR+AGGDRYDVSDRYPQNGY KDRG
Subjt:  GGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGNRDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRG

Query:  GYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        GY+RDIGPR+GSDRYGSGGPGRYEGRSYRDR GPYDRPSRGGRPSSYERY
Subjt:  GYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

A0A6J1BW89 glycine-rich RNA-binding protein RZ1C-like isoform X17.9e-14792.36Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG
        MA KDEYRIFVGGLSWN+SERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG

Query:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN
        YSSGGR  FGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSD RGDRF GDRDRYVDDRY    DGGRYGDRD FDRRDDKYG+
Subjt:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN

Query:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPS GDR+AGGDRYDVSDRYPQNGY KDRGGY+RDIGPR+GSDRYGSGGPGRYEGRSYRDR GPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

A0A6J1HB93 glycine-rich RNA-binding protein RZ1C-like4.3e-15394.81Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG
        MAAKDEYRIFVGGLSWNVSER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG

Query:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN
        YSSGGRA FGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD D RGDRF GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYG+
Subjt:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN

Query:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPSAGDR+ GGDRYDVSDRYPQNGY KDRGGYDRDIGPR+GSDRYG+ GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

A0A6J1JS04 glycine-rich RNA-binding protein RZ1C3.3e-15394.81Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG
        MAAKDEYRIFVGGLSWNVSER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGG

Query:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN
        YSSGGRA FGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD D RGDRF GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYG+
Subjt:  YSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRF-GDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGN

Query:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPSAGDR+AGGDRYDVSDRYPQNGY KDRGGYDRDIGPR+GSDRYG+ GGPGRYEGR+YRDRPGPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

SwissProt top hitse value%identityAlignment
O22703 Glycine-rich RNA-binding protein RZ1B4.1e-7658.45Show/hide
Query:  EYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGGYSSGG
        E RIFVGGLSW+V+ERQLE+ F RYGKI E QIM+ RDTGRPRGFGFITF DRRG DDAI+ MHG E G ++ISVNKAEPK+ G+D +   +GGGYSS G
Subjt:  EYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGGYSSGG

Query:  RAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF-DSDGRGDRFGDR------------DRYVDDRYDGGRDGGRYGDRDRFDR
        +            +DECFKC RPGHWARDCPS G  R R R   + RSR  D DG  DR+GDR            DRY+D R D  RDGGRY  RDRFD 
Subjt:  RAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF-DSDGRGDRFGDR------------DRYVDDRYDGGRDGGRYGDRDRFDR

Query:  RDDKYGNRDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY
          DKY  RD Y  +RY   GDR+   DRY + + + +N Y      YDRD   R+ SDRYG  GP R EGR YR RPGPYDRPSR GGRPSSYER+
Subjt:  RDDKYGNRDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY

P49310 Glycine-rich RNA-binding protein GRP1A3.4e-2241.94Show/hide
Query:  MAAKD-EYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGG
        MA+ D EYR FVGGL+W   +R LE AFS+YG++L+++I+ +R+TGR RGFGF+TF D + M DAI  M+G +   R I+VN+A+ +  G        GG
Subjt:  MAAKD-EYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGG

Query:  GYSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRFGDRDRYVDDRYDGGRDGGRYG
        GY SGG  G+G GG            G  G   R+     GG   G G +SSR      G G  +G        R DGG +GG YG
Subjt:  GYSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRFGDRDRYVDDRYDGGRDGGRYG

Q03250 Glycine-rich RNA-binding protein 77.6e-2241.18Show/hide
Query:  MAAKD-EYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPK-MEGDDTEPGFRG
        MA+ D EYR FVGGL+W   +R LE AF++YG +++++I+ +R+TGR RGFGF+TF D + M DAI  M+G +   R I+VN+A+ +   G     G  G
Subjt:  MAAKD-EYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPK-MEGDDTEPGFRG

Query:  GGYSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRFGDRDRYVDDRYDGGRDGGRYG
        GGY SGG  G+  GG    G          G   R+    GGG   G G +SSR      G G  +G   R     Y GG +GG YG
Subjt:  GGYSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRFGDRDRYVDDRYDGGRDGGRYG

Q8RWN5 Glycine-rich RNA-binding protein RZ1C1.8e-7961.11Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEP-GFRGG
        MAAK+  RIFVGGLS  V++R LE AFSR+G IL+ QIMLERDTGR RGFGFITFADRR MD++IREMHG +FG+R+ISVN+AEPK+  DD E  G RGG
Subjt:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEP-GFRGG

Query:  ---GYSSGGRAGFGRGGDRS--VGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF--DSDGRGDRFGDRDRYV------DDRYDGGRDGGRYGD
           GYS  G+  FG GG     VG+DECFKCGR GHWARDCPS GGGRG   G FSSR+     SDGR DR+ DRDRYV      DDRYDG     RYG 
Subjt:  ---GYSSGGRAGFGRGGDRS--VGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF--DSDGRGDRFGDRDRYV------DDRYDGGRDGGRYGD

Query:  RDRFDRRDDKYGNRDRYFDDRYPSAGDRYAGGDRYD-VSDRYPQNGYAKDRGGYDRDIGPRNGSDRYG---SGGP---GRYEGRSYRDRPG-PYDRPSRG
        RDRFD R + Y  RDRY  DRY +  DR+AGGDRY   SDRYP   Y K R  ++RDI P  GSDRYG   +GGP   G  EGR +R R G PY+RPSR 
Subjt:  RDRFDRRDDKYGNRDRYFDDRYPSAGDRYAGGDRYD-VSDRYPQNGYAKDRGGYDRDIGPRNGSDRYG---SGGP---GRYEGRSYRDRPG-PYDRPSRG

Query:  GRPSSY
        G   +Y
Subjt:  GRPSSY

Q9LIN3 Glycine-rich RNA-binding protein RZ1A5.1e-3439.44Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEG----DDTEPGF
        M+   EYR F+GGL+W  S+R L +AF +YG ++E +++L++ +GR RGFGFITF +++ MD+AI  M+G +   R I+V+KA+P   G    +D + G 
Subjt:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEG----DDTEPGF

Query:  RGGGYSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRFGDRDRYVDDRYDGGRDGGRYGDR-DRFDRRDD
          G      R   GRGG       +CFKCG+PGH+AR+CPS     G GR  FSS+         DR+  +    DDRY  G    RYG + DR+  +DD
Subjt:  RGGGYSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRFGDRDRYVDDRYDGGRDGGRYGDR-DRFDRRDD

Query:  KYGNRDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGG
        +Y ++    DDRY S  DRY  G R     RY  +   +  GG  RD G R        G PG       R    PYDRP  GG
Subjt:  KYGNRDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGG

Arabidopsis top hitse value%identityAlignment
AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain2.9e-7758.45Show/hide
Query:  EYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGGYSSGG
        E RIFVGGLSW+V+ERQLE+ F RYGKI E QIM+ RDTGRPRGFGFITF DRRG DDAI+ MHG E G ++ISVNKAEPK+ G+D +   +GGGYSS G
Subjt:  EYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGGYSSGG

Query:  RAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF-DSDGRGDRFGDR------------DRYVDDRYDGGRDGGRYGDRDRFDR
        +            +DECFKC RPGHWARDCPS G  R R R   + RSR  D DG  DR+GDR            DRY+D R D  RDGGRY  RDRFD 
Subjt:  RAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF-DSDGRGDRFGDR------------DRYVDDRYDGGRDGGRYGDRDRFDR

Query:  RDDKYGNRDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY
          DKY  RD Y  +RY   GDR+   DRY + + + +N Y      YDRD   R+ SDRYG  GP R EGR YR RPGPYDRPSR GGRPSSYER+
Subjt:  RDDKYGNRDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY

AT1G60650.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain2.9e-7758.45Show/hide
Query:  EYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGGYSSGG
        E RIFVGGLSW+V+ERQLE+ F RYGKI E QIM+ RDTGRPRGFGFITF DRRG DDAI+ MHG E G ++ISVNKAEPK+ G+D +   +GGGYSS G
Subjt:  EYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGGYSSGG

Query:  RAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF-DSDGRGDRFGDR------------DRYVDDRYDGGRDGGRYGDRDRFDR
        +            +DECFKC RPGHWARDCPS G  R R R   + RSR  D DG  DR+GDR            DRY+D R D  RDGGRY  RDRFD 
Subjt:  RAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF-DSDGRGDRFGDR------------DRYVDDRYDGGRDGGRYGDRDRFDR

Query:  RDDKYGNRDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY
          DKY  RD Y  +RY   GDR+   DRY + + + +N Y      YDRD   R+ SDRYG  GP R EGR YR RPGPYDRPSR GGRPSSYER+
Subjt:  RDDKYGNRDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY

AT2G21660.1 cold, circadian rhythm, and rna binding 25.4e-2341.18Show/hide
Query:  MAAKD-EYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPK-MEGDDTEPGFRG
        MA+ D EYR FVGGL+W   +R LE AF++YG +++++I+ +R+TGR RGFGF+TF D + M DAI  M+G +   R I+VN+A+ +   G     G  G
Subjt:  MAAKD-EYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPK-MEGDDTEPGFRG

Query:  GGYSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRFGDRDRYVDDRYDGGRDGGRYG
        GGY SGG  G+  GG    G          G   R+    GGG   G G +SSR      G G  +G   R     Y GG +GG YG
Subjt:  GGYSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRFGDRDRYVDDRYDGGRDGGRYG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.6e-3539.44Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEG----DDTEPGF
        M+   EYR F+GGL+W  S+R L +AF +YG ++E +++L++ +GR RGFGFITF +++ MD+AI  M+G +   R I+V+KA+P   G    +D + G 
Subjt:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEG----DDTEPGF

Query:  RGGGYSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRFGDRDRYVDDRYDGGRDGGRYGDR-DRFDRRDD
          G      R   GRGG       +CFKCG+PGH+AR+CPS     G GR  FSS+         DR+  +    DDRY  G    RYG + DR+  +DD
Subjt:  RGGGYSSGGRAGFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRFGDRDRYVDDRYDGGRDGGRYGDR-DRFDRRDD

Query:  KYGNRDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGG
        +Y ++    DDRY S  DRY  G R     RY  +   +  GG  RD G R        G PG       R    PYDRP  GG
Subjt:  KYGNRDRYFDDRYPSAGDRYAGGDRYDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.3e-8061.11Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEP-GFRGG
        MAAK+  RIFVGGLS  V++R LE AFSR+G IL+ QIMLERDTGR RGFGFITFADRR MD++IREMHG +FG+R+ISVN+AEPK+  DD E  G RGG
Subjt:  MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEP-GFRGG

Query:  ---GYSSGGRAGFGRGGDRS--VGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF--DSDGRGDRFGDRDRYV------DDRYDGGRDGGRYGD
           GYS  G+  FG GG     VG+DECFKCGR GHWARDCPS GGGRG   G FSSR+     SDGR DR+ DRDRYV      DDRYDG     RYG 
Subjt:  ---GYSSGGRAGFGRGGDRS--VGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF--DSDGRGDRFGDRDRYV------DDRYDGGRDGGRYGD

Query:  RDRFDRRDDKYGNRDRYFDDRYPSAGDRYAGGDRYD-VSDRYPQNGYAKDRGGYDRDIGPRNGSDRYG---SGGP---GRYEGRSYRDRPG-PYDRPSRG
        RDRFD R + Y  RDRY  DRY +  DR+AGGDRY   SDRYP   Y K R  ++RDI P  GSDRYG   +GGP   G  EGR +R R G PY+RPSR 
Subjt:  RDRFDRRDDKYGNRDRYFDDRYPSAGDRYAGGDRYD-VSDRYPQNGYAKDRGGYDRDIGPRNGSDRYG---SGGP---GRYEGRSYRDRPG-PYDRPSRG

Query:  GRPSSY
        G   +Y
Subjt:  GRPSSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCGAAGGACGAGTACCGAATATTTGTCGGAGGACTCTCATGGAACGTCTCGGAGCGTCAGCTCGAGAACGCTTTCAGCCGCTACGGAAAAATTCTTGAAACTCA
GATCATGTTAGAACGAGATACAGGTCGTCCTCGTGGGTTTGGTTTTATTACCTTTGCAGACCGTCGAGGGATGGATGATGCAATCAGAGAGATGCATGGGCATGAGTTTG
GTGAGCGGATTATCTCAGTAAATAAGGCCGAACCCAAGATGGAGGGAGATGATACAGAGCCAGGTTTCAGGGGGGGAGGCTATTCATCTGGTGGTAGGGCTGGTTTTGGG
AGAGGAGGAGATAGATCTGTGGGGCAAGATGAATGCTTCAAGTGTGGTCGCCCAGGGCACTGGGCACGAGACTGTCCTTCAGTTGGTGGTGGGCGTGGTAGGGGTAGAGG
CTCATTTTCATCACGTTCTCGATTTGATAGTGATGGCCGTGGGGATCGTTTTGGTGATCGTGACCGATATGTGGATGACCGTTATGATGGAGGGCGAGATGGGGGACGAT
ATGGTGATAGAGATCGTTTTGATCGTAGAGACGACAAGTATGGAAATCGAGACCGCTATTTTGACGACAGGTACCCATCTGCTGGTGATCGTTACGCAGGTGGTGATCGG
TATGATGTTAGTGATCGCTATCCTCAAAATGGCTATGCAAAAGACAGAGGCGGCTATGATAGGGATATTGGTCCTAGGAATGGCAGTGATAGGTATGGTAGCGGAGGTCC
TGGCCGTTATGAGGGAAGAAGTTACAGAGATAGGCCAGGCCCTTACGATCGCCCGAGCAGGGGAGGACGACCGTCTTCCTACGAGCGTTATTGA
mRNA sequenceShow/hide mRNA sequence
GCTAGGGTTTAGACTTTGGAGCCTAAAAACCCTGCACCGTGTGGAACTCACTGGTTTCACTTCAGATTACAAAGTTTTCTGCAGGAATTGTATCTGATTGATAGCCGAAG
GGGTAATGGCTGCGAAGGACGAGTACCGAATATTTGTCGGAGGACTCTCATGGAACGTCTCGGAGCGTCAGCTCGAGAACGCTTTCAGCCGCTACGGAAAAATTCTTGAA
ACTCAGATCATGTTAGAACGAGATACAGGTCGTCCTCGTGGGTTTGGTTTTATTACCTTTGCAGACCGTCGAGGGATGGATGATGCAATCAGAGAGATGCATGGGCATGA
GTTTGGTGAGCGGATTATCTCAGTAAATAAGGCCGAACCCAAGATGGAGGGAGATGATACAGAGCCAGGTTTCAGGGGGGGAGGCTATTCATCTGGTGGTAGGGCTGGTT
TTGGGAGAGGAGGAGATAGATCTGTGGGGCAAGATGAATGCTTCAAGTGTGGTCGCCCAGGGCACTGGGCACGAGACTGTCCTTCAGTTGGTGGTGGGCGTGGTAGGGGT
AGAGGCTCATTTTCATCACGTTCTCGATTTGATAGTGATGGCCGTGGGGATCGTTTTGGTGATCGTGACCGATATGTGGATGACCGTTATGATGGAGGGCGAGATGGGGG
ACGATATGGTGATAGAGATCGTTTTGATCGTAGAGACGACAAGTATGGAAATCGAGACCGCTATTTTGACGACAGGTACCCATCTGCTGGTGATCGTTACGCAGGTGGTG
ATCGGTATGATGTTAGTGATCGCTATCCTCAAAATGGCTATGCAAAAGACAGAGGCGGCTATGATAGGGATATTGGTCCTAGGAATGGCAGTGATAGGTATGGTAGCGGA
GGTCCTGGCCGTTATGAGGGAAGAAGTTACAGAGATAGGCCAGGCCCTTACGATCGCCCGAGCAGGGGAGGACGACCGTCTTCCTACGAGCGTTATTGAAACTCAGATGT
ACGTATTGTCCGTAGTTGTTTATTTACAATATCAAATCATTCTACAAAACTTGTGAGTTATCTAGGATTTGCACTTGCAATGAACTCTTTATGCAACCTATGAACTTCTA
TGGATTTGATGATGCCTATCCAAATCTCCACTGCTTTTGAAAATATCTAGTCAGAAAAATTTTGGATGTTACAAATATCTGATATGCATAGGGTACCTTACCCTACTTCC
AGTCATTCATTTTTGACTTCTGATGAATTATTATATGCCATATTGAGTCCTGTTTCACATCTTTCTCTTTCTTTGTGAACAGATGTTGACTTTAATCTGTTCTTTTCCAA
GGGACAACAGACAGAACTTTCATTTTCTTAGTCTTTGAAATAGTTAAATCAAAGTCCATTATTTGATAGAAAAAAGAGAGTTGCTTTCTGGCATTGAGATCAAATGTGTT
GAATTGTCAATTGAAAACCCTAGCTGCTTTGTGATAAGCATTGACT
Protein sequenceShow/hide protein sequence
MAAKDEYRIFVGGLSWNVSERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDTEPGFRGGGYSSGGRAGFG
RGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDGRGDRFGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGNRDRYFDDRYPSAGDRYAGGDR
YDVSDRYPQNGYAKDRGGYDRDIGPRNGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY