| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-123 | 51.3 | Show/hide |
Query: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
M+ E+ESM+FNSVWDLVD+PDGVKPIGCKW+YKRKRG DGKVQTFKARLVAKGYTQVEGVDYEETF PVAM+KSIRILL IAAY+DYE
Subjt: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
Query: ------------------------------------------------------------------------------------------------EWLA
+WLA
Subjt: ------------------------------------------------------------------------------------------------EWLA
Query: MQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQGVEDMRRIPYASPFGRAMYAMLCTRPDIH
QFQMKDLG+AQFVLG QI +RKNK+LALSQASY+DK++ ++ MQ+SK+GLL FRH + LSKEQCPKTPQ VE+MR IPYAS G MYAMLCTRPDI
Subjt: MQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQGVEDMRRIPYASPFGRAMYAMLCTRPDIH
Query: FC-----------------------------------------------------DWDGR-------------------VKQGCIADSTMEAEYVAACEA
+ D D R +KQGCIADSTMEAEYVAACEA
Subjt: FC-----------------------------------------------------DWDGR-------------------VKQGCIADSTMEAEYVAACEA
Query: AKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIASEHNIVDPFTKALTAKVFESHLEGLGLQ
AKE VWLR F+++LEVVPNM+ PIT+YCDNSGAVANSREPRSHKRGKHIERKYHLI EIVHRGDVI+T+IAS HN+ DPFTK LTAKVFE HLE LGL+
Subjt: AKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIASEHNIVDPFTKALTAKVFESHLEGLGLQ
|
|
| KAA0054309.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-127 | 58.18 | Show/hide |
Query: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
M+ E+ESM+FNSVWDLVD+PDGVKPIGCKW+YKRKRG DGKVQTFKARLVAKGYTQVEGVDYEETF VAM+KSIRILL IAAY++YE
Subjt: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
Query: -------------------------EWLAMQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQ
+WLA QFQMKDLG+AQFVLG QI +RKNK+LALSQASY+DK++ ++ MQ+SK+ LL FRH + LSKEQCPKTPQ
Subjt: -------------------------EWLAMQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQ
Query: GVEDMRRIPYASPFGRAMYAMLCTRPDIHFC-----------------------------------------------------DWDGR-----------
VE+MR IPYAS G MYAMLCTRPDI + D D R
Subjt: GVEDMRRIPYASPFGRAMYAMLCTRPDIHFC-----------------------------------------------------DWDGR-----------
Query: --------VKQGCIADSTMEAEYVAACEAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIA
+KQGCIADSTME EYVAACEAAKEVVWLR F+++LEVVPNM+ PIT+YCDN+G VANSREPRSHKRGKHIERKYHLI EIVHRGDVI+T+I
Subjt: --------VKQGCIADSTMEAEYVAACEAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIA
Query: SEHNIVDPFTKALTAKVFESHLEGLGLQ
S HN+ DPFTK LTAKVFE HLE LG++
Subjt: SEHNIVDPFTKALTAKVFESHLEGLGLQ
|
|
| KAA0055498.1 gag-pol fusion protein [Cucumis melo var. makuwa] | 3.9e-128 | 59.24 | Show/hide |
Query: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
M+ E+ESM+FNSVWDLVD+PDGVKPIGCKW+YKRKRG DGKVQTFKARLVAKGYTQVEGVDYEETF PVAM+KSIRILL IAAY+DYE
Subjt: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
Query: -------------------------EWLAMQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQ
+WLA QFQMKDLG+AQFVLG QI +RKNKILALSQASY+DK++ ++ MQ+SK+GLL FRH + LSKEQCPKTPQ
Subjt: -------------------------EWLAMQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQ
Query: GVEDMRRIPYASPFGRAMYAMLCTRPDIHFC-----------------------------------------------------DWDGR-----------
VE+MR IPYAS G MY MLCTRPDI + D D R
Subjt: GVEDMRRIPYASPFGRAMYAMLCTRPDIHFC-----------------------------------------------------DWDGR-----------
Query: --------VKQGCIADSTMEAEYVAACEAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIA
+KQGCIADST+EAEYVAACEAAKE VWLR F+++LEVVPNM+ PIT+YCDNSGAVANSREPRSHKRGKHIERKYHLI EIVHRGDVI+T+IA
Subjt: --------VKQGCIADSTMEAEYVAACEAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIA
Query: SEHNIVDPFTKALTAKVFESHL
S HN+ DPFTK L AKVFE HL
Subjt: SEHNIVDPFTKALTAKVFESHL
|
|
| KAA0059546.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 1.2e-129 | 59.11 | Show/hide |
Query: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
M+ E+ES++FNSVWDLVD+PDGVKPIGCKW+YKRKRG DGKVQTFKARLVAKGYTQVEGVDYEETF PVAM+KSIRILL IAAY+DYE
Subjt: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
Query: -------------------------EWLAMQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQ
+WLA QFQMKDLG+AQFVLG QI +RKNK+LALSQASY+DK++ ++ MQ+SK+GLL FRH + LSKEQCPKTPQ
Subjt: -------------------------EWLAMQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQ
Query: GVEDMRRIPYASPFGRAMYAMLCTRPDIHF-----------------------------------------------------CDWDGR-----------
VE+MR IPYAS G +YAMLCTRPDI + D D R
Subjt: GVEDMRRIPYASPFGRAMYAMLCTRPDIHF-----------------------------------------------------CDWDGR-----------
Query: --------VKQGCIADSTMEAEYVAACEAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIA
+KQGCIADSTMEAEYVAACEAAKE VWLR F+++LEVVPNM+ PIT+YCDNSGAVANSREPRSHKRGKHIERKYHLI EIVHR DVI+T+IA
Subjt: --------VKQGCIADSTMEAEYVAACEAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIA
Query: SEHNIVDPFTKALTAKVFESHLEGLGLQ
S HN+ DPFTK L AKVFESHLE LGL+
Subjt: SEHNIVDPFTKALTAKVFESHLEGLGLQ
|
|
| TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-123 | 51.3 | Show/hide |
Query: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
M+ E+ESM+FNSVWDLVD+PDGVKPIGCKW+YKRKRG DGKVQTFKARLVAKGYTQVEGVDYEETF PVAM+KSIRILL IAAY+DYE
Subjt: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
Query: ------------------------------------------------------------------------------------------------EWLA
+WLA
Subjt: ------------------------------------------------------------------------------------------------EWLA
Query: MQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQGVEDMRRIPYASPFGRAMYAMLCTRPDIH
QFQMKDLG+AQFVLG QI +RKNK+LALSQASY+DK++ ++ MQ+SK+GLL FRH + LSKEQCPKTPQ VE+MR IPYAS G MYAMLCTRPDI
Subjt: MQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQGVEDMRRIPYASPFGRAMYAMLCTRPDIH
Query: FC-----------------------------------------------------DWDGR-------------------VKQGCIADSTMEAEYVAACEA
+ D D R +KQGCIADSTMEAEYVAACEA
Subjt: FC-----------------------------------------------------DWDGR-------------------VKQGCIADSTMEAEYVAACEA
Query: AKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIASEHNIVDPFTKALTAKVFESHLEGLGLQ
AKE VWLR F+++LEVVPNM+ PIT+YCDNSGAVANSREPRSHKRGKHIERKYHLI EIVHRGDVI+T+IAS HN+ DPFTK LTAKVFE HLE LGL+
Subjt: AKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIASEHNIVDPFTKALTAKVFESHLEGLGLQ
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 8.1e-124 | 51.3 | Show/hide |
Query: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
M+ E+ESM+FNSVWDLVD+PDGVKPIGCKW+YKRKRG DGKVQTFKARLVAKGYTQVEGVDYEETF PVAM+KSIRILL IAAY+DYE
Subjt: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
Query: ------------------------------------------------------------------------------------------------EWLA
+WLA
Subjt: ------------------------------------------------------------------------------------------------EWLA
Query: MQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQGVEDMRRIPYASPFGRAMYAMLCTRPDIH
QFQMKDLG+AQFVLG QI +RKNK+LALSQASY+DK++ ++ MQ+SK+GLL FRH + LSKEQCPKTPQ VE+MR IPYAS G MYAMLCTRPDI
Subjt: MQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQGVEDMRRIPYASPFGRAMYAMLCTRPDIH
Query: FC-----------------------------------------------------DWDGR-------------------VKQGCIADSTMEAEYVAACEA
+ D D R +KQGCIADSTMEAEYVAACEA
Subjt: FC-----------------------------------------------------DWDGR-------------------VKQGCIADSTMEAEYVAACEA
Query: AKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIASEHNIVDPFTKALTAKVFESHLEGLGLQ
AKE VWLR F+++LEVVPNM+ PIT+YCDNSGAVANSREPRSHKRGKHIERKYHLI EIVHRGDVI+T+IAS HN+ DPFTK LTAKVFE HLE LGL+
Subjt: AKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIASEHNIVDPFTKALTAKVFESHLEGLGLQ
|
|
| A0A5A7UKD1 Gag-pol fusion protein | 1.9e-128 | 59.24 | Show/hide |
Query: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
M+ E+ESM+FNSVWDLVD+PDGVKPIGCKW+YKRKRG DGKVQTFKARLVAKGYTQVEGVDYEETF PVAM+KSIRILL IAAY+DYE
Subjt: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
Query: -------------------------EWLAMQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQ
+WLA QFQMKDLG+AQFVLG QI +RKNKILALSQASY+DK++ ++ MQ+SK+GLL FRH + LSKEQCPKTPQ
Subjt: -------------------------EWLAMQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQ
Query: GVEDMRRIPYASPFGRAMYAMLCTRPDIHFC-----------------------------------------------------DWDGR-----------
VE+MR IPYAS G MY MLCTRPDI + D D R
Subjt: GVEDMRRIPYASPFGRAMYAMLCTRPDIHFC-----------------------------------------------------DWDGR-----------
Query: --------VKQGCIADSTMEAEYVAACEAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIA
+KQGCIADST+EAEYVAACEAAKE VWLR F+++LEVVPNM+ PIT+YCDNSGAVANSREPRSHKRGKHIERKYHLI EIVHRGDVI+T+IA
Subjt: --------VKQGCIADSTMEAEYVAACEAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIA
Query: SEHNIVDPFTKALTAKVFESHL
S HN+ DPFTK L AKVFE HL
Subjt: SEHNIVDPFTKALTAKVFESHL
|
|
| A0A5A7ULH1 Gag/pol protein | 5.4e-128 | 58.18 | Show/hide |
Query: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
M+ E+ESM+FNSVWDLVD+PDGVKPIGCKW+YKRKRG DGKVQTFKARLVAKGYTQVEGVDYEETF VAM+KSIRILL IAAY++YE
Subjt: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
Query: -------------------------EWLAMQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQ
+WLA QFQMKDLG+AQFVLG QI +RKNK+LALSQASY+DK++ ++ MQ+SK+ LL FRH + LSKEQCPKTPQ
Subjt: -------------------------EWLAMQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQ
Query: GVEDMRRIPYASPFGRAMYAMLCTRPDIHFC-----------------------------------------------------DWDGR-----------
VE+MR IPYAS G MYAMLCTRPDI + D D R
Subjt: GVEDMRRIPYASPFGRAMYAMLCTRPDIHFC-----------------------------------------------------DWDGR-----------
Query: --------VKQGCIADSTMEAEYVAACEAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIA
+KQGCIADSTME EYVAACEAAKEVVWLR F+++LEVVPNM+ PIT+YCDN+G VANSREPRSHKRGKHIERKYHLI EIVHRGDVI+T+I
Subjt: --------VKQGCIADSTMEAEYVAACEAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIA
Query: SEHNIVDPFTKALTAKVFESHLEGLGLQ
S HN+ DPFTK LTAKVFE HLE LG++
Subjt: SEHNIVDPFTKALTAKVFESHLEGLGLQ
|
|
| A0A5A7UZE3 Retrotransposon protein, putative, Ty1-copia subclass | 5.8e-130 | 59.11 | Show/hide |
Query: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
M+ E+ES++FNSVWDLVD+PDGVKPIGCKW+YKRKRG DGKVQTFKARLVAKGYTQVEGVDYEETF PVAM+KSIRILL IAAY+DYE
Subjt: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
Query: -------------------------EWLAMQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQ
+WLA QFQMKDLG+AQFVLG QI +RKNK+LALSQASY+DK++ ++ MQ+SK+GLL FRH + LSKEQCPKTPQ
Subjt: -------------------------EWLAMQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQ
Query: GVEDMRRIPYASPFGRAMYAMLCTRPDIHF-----------------------------------------------------CDWDGR-----------
VE+MR IPYAS G +YAMLCTRPDI + D D R
Subjt: GVEDMRRIPYASPFGRAMYAMLCTRPDIHF-----------------------------------------------------CDWDGR-----------
Query: --------VKQGCIADSTMEAEYVAACEAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIA
+KQGCIADSTMEAEYVAACEAAKE VWLR F+++LEVVPNM+ PIT+YCDNSGAVANSREPRSHKRGKHIERKYHLI EIVHR DVI+T+IA
Subjt: --------VKQGCIADSTMEAEYVAACEAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIA
Query: SEHNIVDPFTKALTAKVFESHLEGLGLQ
S HN+ DPFTK L AKVFESHLE LGL+
Subjt: SEHNIVDPFTKALTAKVFESHLEGLGLQ
|
|
| A0A5D3CPJ6 Gag/pol protein | 8.1e-124 | 51.3 | Show/hide |
Query: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
M+ E+ESM+FNSVWDLVD+PDGVKPIGCKW+YKRKRG DGKVQTFKARLVAKGYTQVEGVDYEETF PVAM+KSIRILL IAAY+DYE
Subjt: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
Query: ------------------------------------------------------------------------------------------------EWLA
+WLA
Subjt: ------------------------------------------------------------------------------------------------EWLA
Query: MQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQGVEDMRRIPYASPFGRAMYAMLCTRPDIH
QFQMKDLG+AQFVLG QI +RKNK+LALSQASY+DK++ ++ MQ+SK+GLL FRH + LSKEQCPKTPQ VE+MR IPYAS G MYAMLCTRPDI
Subjt: MQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQGVEDMRRIPYASPFGRAMYAMLCTRPDIH
Query: FC-----------------------------------------------------DWDGR-------------------VKQGCIADSTMEAEYVAACEA
+ D D R +KQGCIADSTMEAEYVAACEA
Subjt: FC-----------------------------------------------------DWDGR-------------------VKQGCIADSTMEAEYVAACEA
Query: AKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIASEHNIVDPFTKALTAKVFESHLEGLGLQ
AKE VWLR F+++LEVVPNM+ PIT+YCDNSGAVANSREPRSHKRGKHIERKYHLI EIVHRGDVI+T+IAS HN+ DPFTK LTAKVFE HLE LGL+
Subjt: AKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIASEHNIVDPFTKALTAKVFESHLEGLGLQ
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.0e-22 | 21.74 | Show/hide |
Query: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYY---------------
++ E+ + N+ W + +P+ + +WV+ K G +KARLVA+G+TQ +DYEETF PVA + S R +L + Y
Subjt: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYY---------------
Query: ---------------------------------------------------------------------------------------------DYEEWLA
+++ +L
Subjt: ---------------------------------------------------------------------------------------------DYEEWLA
Query: MQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHL----SKEQCPKTPQGVEDMRRIPYASPFGRAMYAMLCTR
+F+M DL + + +G +I +++KI LSQ++Y+ K+LS+F M++ I+ S E C P S G MY MLCTR
Subjt: MQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHL----SKEQCPKTPQGVEDMRRIPYASPFGRAMYAMLCTR
Query: PDIHFC----------------------------------------------------DWDG------------------------RVKQGCIADSTMEA
PD+ DW G +Q +A S+ EA
Subjt: PDIHFC----------------------------------------------------DWDG------------------------RVKQGCIADSTMEA
Query: EYVAACEAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIASEHNIVDPFTKALTAKVFESH
EY+A EA +E +WL+ + ++ + + PI +Y DN G ++ + P HKR KHI+ KYH E V + + I +E+ + D FTK L A F
Subjt: EYVAACEAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIASEHNIVDPFTKALTAKVFESH
Query: LEGLGL
+ LGL
Subjt: LEGLGL
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.7e-42 | 26.6 | Show/hide |
Query: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
M +EMES+ N + LV+ P G +P+ CKWV+K K+ D K+ +KARLV KG+ Q +G+D++E F PV + SIR +L +AA D E
Subjt: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYE------------
Query: ---------------------------------------EW----------------------------------------------------------L
+W L
Subjt: ---------------------------------------EW----------------------------------------------------------L
Query: AMQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQGVEDMRRIPYASPFGRAMYAMLCTRPDI
+ F MKDLG AQ +LG +IV R ++ L LSQ Y+++VL RF M+++K + LSK+ CP T + +M ++PY+S G MYAM+CTRPDI
Subjt: AMQFQMKDLGDAQFVLGNQIVWNRKNKILALSQASYLDKVLSRFKMQDSKKGLLLFRHVIHLSKEQCPKTPQGVEDMRRIPYASPFGRAMYAMLCTRPDI
Query: -----------------HF--------------------------------------------------------CDWDGRVKQGCIADSTMEAEYVAAC
H+ W ++ Q C+A ST EAEY+AA
Subjt: -----------------HF--------------------------------------------------------CDWDGRVKQGCIADSTMEAEYVAAC
Query: EAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIASEHNIVDPFTKALTAKVFESHLEGLGL
E KE++WL++F+ L + +YCD+ A+ S+ H R KHI+ +YH I E+V + + KI++ N D TK + FE E +G+
Subjt: EAAKEVVWLRKFMLNLEVVPNMTLPITMYCDNSGAVANSREPRSHKRGKHIERKYHLIGEIVHRGDVIITKIASEHNIVDPFTKALTAKVFESHLEGLGL
|
|
| P92520 Uncharacterized mitochondrial protein AtMg00820 | 7.3e-13 | 38.14 | Show/hide |
Query: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYEEWLAMQFQM
M +E++++ N W LV P +GCKWV+K K DG + KARLVAKG+ Q EG+ + ET+ PV +IR +L +A + + + F+M
Subjt: MDQEMESMHFNSVWDLVDKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIAAYYDYEEWLAMQFQM
|
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-13 | 46.99 | Show/hide |
Query: MDQEMESMHFNSVWDLVDKPDG-VKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIA
M E+ + N WDLV P V +GC+W++ +K DG + +KARLVAKGY Q G+DY ETF PV SIRI+L +A
Subjt: MDQEMESMHFNSVWDLVDKPDG-VKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIA
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.9e-13 | 46.99 | Show/hide |
Query: MDQEMESMHFNSVWDLV-DKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIA
M E+ + N WDLV P V +GC+W++ +K DG + +KARLVAKGY Q G+DY ETF PV SIRI+L +A
Subjt: MDQEMESMHFNSVWDLV-DKPDGVKPIGCKWVYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFLPVAMVKSIRILLVIA
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