; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0006957 (gene) of Snake gourd v1 genome

Gene IDTan0006957
OrganismTrichosanthes anguina (Snake gourd v1)
Description50S ribosomal protein L5, chloroplastic
Genome locationLG10:2155780..2158986
RNA-Seq ExpressionTan0006957
SyntenyTan0006957
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002132 - Ribosomal protein L5
IPR020929 - Ribosomal protein L5, conserved site
IPR020930 - Ribosomal protein L5, bacterial-type
IPR022803 - Ribosomal protein L5 domain superfamily
IPR031309 - Ribosomal protein L5, C-terminal
IPR031310 - Ribosomal protein L5, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK17619.1 50S ribosomal protein L5 [Cucumis melo var. makuwa]5.7e-13392.99Show/hide
Query:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVK--ASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVV
        MASSSLLSS+TSSFHGHSPFFS RF+APV  GNPSNVA LAVRVK  ASAGGAIVLVEKAEAEKV+RLKSNY++KIVPLLMDEFSY+NIHQVPKIEKIVV
Subjt:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVK--ASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQS
        NCGIGDAQQNAKGL+AAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNS+SFDGHGNYSIG+REQS
Subjt:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQS

Query:  VFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMD+CITTTAETDQEAQRLLALMGMPFRES G+A VMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR

XP_004133849.1 50S ribosomal protein L5, chloroplastic [Cucumis sativus]1.3e-13292.99Show/hide
Query:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVK--ASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVV
        MASSSLLSS+TSSFHGHSPFFS RFAAPV  GNPSNVA L +RVK  AS GGAIVLVEKAEAEKV+RLKSNYL+KIVPLLMDEFSY NIHQVPKIEKIVV
Subjt:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVK--ASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQS
        NCGIGDAQQNAKGLEAA+NELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNS+SFDGHGNYSIG+REQS
Subjt:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQS

Query:  VFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMD+CITTTAETDQEAQRLLALMGMPFRESGG+A VMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR

XP_008438004.1 PREDICTED: 50S ribosomal protein L5, chloroplastic [Cucumis melo]3.0e-13493.73Show/hide
Query:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVK--ASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVV
        MASSSLLSS+TSSFHGHSPFFS RFAAPV FGNPSNVA LAVRVK  ASAGGAIVLVEKAEAEKV+RLKSNY++KIVPLLMDEFSY+NIHQVPKIEKIVV
Subjt:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVK--ASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQS
        NCGIGDAQQNAKGL+AAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNS+SFDGHGNYSIG+REQS
Subjt:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQS

Query:  VFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMD+CITTTAETDQEAQRLLALMGMPFRES G+A VMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR

XP_022147519.1 50S ribosomal protein L5, chloroplastic [Momordica charantia]4.1e-13191.82Show/hide
Query:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNC
        MA+SSLLSSA SSFHGH P FS RF AP A GNPSNVAPLAVRVKA+AG +IVLVEKAEAEKV+RLKSNY++KIVPLLMDEFSYTNIHQVPKIEKIVVNC
Subjt:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNC

Query:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVF
        GIGDAQQNAKGLEAAMNELA ITGQRPVKTRAKKSIATFKIREGQPLGIAATLRG+VMYSFLDR+INLGLPRTRDFQG+NSNSFDGHGNYSIG+REQSVF
Subjt:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVF

Query:  PEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR
        PEIKFDT GKPRGMDICITTTAETDQEAQRLLALMGMPFRES GSAT+MRKKKLKSHHFDSKSKGRARR
Subjt:  PEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR

XP_038878175.1 50S ribosomal protein L5, chloroplastic [Benincasa hispida]1.0e-13795.54Show/hide
Query:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNC
        MASSSLLSSATSSFHGHSPFFSARFAAP+A GNPSN+APLAVRVKAS GGAIVLV+KAEAEKV+RLKSNYL+KIVPLLMDEFSYTNIHQVPKIEKIVVNC
Subjt:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNC

Query:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVF
        GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIA TLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIG+REQSVF
Subjt:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVF

Query:  PEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR
        PEIKFDTLGKPRGMD+CITTTAETDQEAQRLLALMGMPFRESGGS  VMRKKKLKSHHFDSKSKGRARR
Subjt:  PEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR

TrEMBL top hitse value%identityAlignment
A0A1S3AVB4 50S ribosomal protein L5, chloroplastic1.5e-13493.73Show/hide
Query:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVK--ASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVV
        MASSSLLSS+TSSFHGHSPFFS RFAAPV FGNPSNVA LAVRVK  ASAGGAIVLVEKAEAEKV+RLKSNY++KIVPLLMDEFSY+NIHQVPKIEKIVV
Subjt:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVK--ASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQS
        NCGIGDAQQNAKGL+AAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNS+SFDGHGNYSIG+REQS
Subjt:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQS

Query:  VFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMD+CITTTAETDQEAQRLLALMGMPFRES G+A VMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR

A0A5A7U637 50S ribosomal protein L5, chloroplastic1.5e-13493.73Show/hide
Query:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVK--ASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVV
        MASSSLLSS+TSSFHGHSPFFS RFAAPV FGNPSNVA LAVRVK  ASAGGAIVLVEKAEAEKV+RLKSNY++KIVPLLMDEFSY+NIHQVPKIEKIVV
Subjt:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVK--ASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQS
        NCGIGDAQQNAKGL+AAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNS+SFDGHGNYSIG+REQS
Subjt:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQS

Query:  VFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMD+CITTTAETDQEAQRLLALMGMPFRES G+A VMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR

A0A5D3D3L2 50S ribosomal protein L5, chloroplastic2.7e-13392.99Show/hide
Query:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVK--ASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVV
        MASSSLLSS+TSSFHGHSPFFS RF+APV  GNPSNVA LAVRVK  ASAGGAIVLVEKAEAEKV+RLKSNY++KIVPLLMDEFSY+NIHQVPKIEKIVV
Subjt:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVK--ASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVV

Query:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQS
        NCGIGDAQQNAKGL+AAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNS+SFDGHGNYSIG+REQS
Subjt:  NCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQS

Query:  VFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR
        VFPEIKFDTLGKPRGMD+CITTTAETDQEAQRLLALMGMPFRES G+A VMRKKKLKSHHFDSKSKGRARR
Subjt:  VFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR

A0A6J1D186 50S ribosomal protein L5, chloroplastic2.0e-13191.82Show/hide
Query:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNC
        MA+SSLLSSA SSFHGH P FS RF AP A GNPSNVAPLAVRVKA+AG +IVLVEKAEAEKV+RLKSNY++KIVPLLMDEFSYTNIHQVPKIEKIVVNC
Subjt:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNC

Query:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVF
        GIGDAQQNAKGLEAAMNELA ITGQRPVKTRAKKSIATFKIREGQPLGIAATLRG+VMYSFLDR+INLGLPRTRDFQG+NSNSFDGHGNYSIG+REQSVF
Subjt:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVF

Query:  PEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR
        PEIKFDT GKPRGMDICITTTAETDQEAQRLLALMGMPFRES GSAT+MRKKKLKSHHFDSKSKGRARR
Subjt:  PEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR

A0A6J1ECQ6 50S ribosomal protein L5, chloroplastic1.8e-12990.33Show/hide
Query:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNC
        MASSS+LSSA SSFHGHSP  SARF AP A G PS VAPL+VRVKAS GGAIVLVEKAEAEKV+RLKSNYL+KIVP+LMDEFSY+NIHQVPKIEKIVVNC
Subjt:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNC

Query:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVF
        GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKK+IATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIG+REQSVF
Subjt:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVF

Query:  PEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR
        PEIKFDTL +PRGMD+CITTTAETDQEAQRLLALMGMPFRES G+A+ +RKKKLKSHHFDSKSKGR+RR
Subjt:  PEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR

SwissProt top hitse value%identityAlignment
B8HMR6 50S ribosomal protein L51.7e-6062.15Show/hide
Query:  RLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDR
        RLK+ YL+  VP LM++F Y NIHQVPK+ KI +N G+G+A QNAK LEA++NE+A I GQ+PV TRAKK+IA FKIR+G P+GI  TLR + MY+F DR
Subjt:  RLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDR

Query:  LINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRE
        LINL LPR RDF+G+N  SFDG GNYS+G+REQ +FPEI +D++ + RGMD+ I TTA TD+E + LL +MGMPFR+
Subjt:  LINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRE

O04603 50S ribosomal protein L5, chloroplastic2.0e-9367.65Show/hide
Query:  MASSSLLSSATSSFHGH-SPF---FSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKI
        MAS SLL S+ SSFHG  SP     SAR  +P          PL   VK SA G  VLVEK+EAEK  RLK+ YL++I+P L +EF Y NIHQVPK++KI
Subjt:  MASSSLLSSATSSFHGH-SPF---FSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKI

Query:  VVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVRE
        VVNCGIGDA QN KGLEAAM ++A ITGQ+P+KTRA+ SIATFKIRE QPLGIA TLRG+VMYSFLDRLINL LPRTRDFQG++ +SFDG+GNYSIGV++
Subjt:  VVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVRE

Query:  QSVFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSAT--VMRKKKLKSHHFDSKSKGR
        Q VFPEI+FD +GK RGMD+CI+TTA++DQE Q+LLALMGMPFRE GG +T  ++RKKKLKSHHFD+K KG+
Subjt:  QSVFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSAT--VMRKKKLKSHHFDSKSKGR

P82192 50S ribosomal protein L5, chloroplastic6.6e-9269.17Show/hide
Query:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNC
        MAS+SLL S +SSF G   F     AAP        V   +  VKA+AG A V V+KAEAE ++RLK+NY++K+VPLL +EFSY+NI +VPK+ KIVVNC
Subjt:  MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNC

Query:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVF
        GIGDA QNAKGL+AA+NELA ITGQRPVKT+AK SIA FK+REG  LGIA TLRGN+MYSFLDRLINL LPRTRDFQG+N NSFDGHGNYS+G REQSVF
Subjt:  GIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVF

Query:  PEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGR
        PEIK + +GK RGMD+CITTTA+TD+EA +LL+LMGMPFRE  G +T++RKKKLKSHHFD+K KGR
Subjt:  PEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGR

Q8DMM0 50S ribosomal protein L57.8e-6162.36Show/hide
Query:  RLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDR
        RLK +Y K +VP LM +F Y NIHQVPKI K+ VN G+G+A QNAK LEA + E+A+ITGQ+PV TRAKK+IA FKIR+G P+G+A TLR   MY+FLDR
Subjt:  RLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDR

Query:  LINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRES
        LINL LPR RDF+G+N  SFDG GNY++G+REQ +FPE+ +D + + RGMD+ I TTA TD+E + LL  MGMPFRE+
Subjt:  LINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRES

Q9ZST0 50S ribosomal protein L5, chloroplastic1.4e-7860.89Show/hide
Query:  PFFSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE
        P  + R AA  A   P   AP       ++   IVLV+  EA+KV RLK+ Y +K+VPL+ +EF YTN+HQVPK+EKIVVNCG+G    N+KGLE+AM +
Subjt:  PFFSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE

Query:  LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVFPEIKFDTLGKPRGMDICI
        LA ITGQ PVKT+AKKS+A+FKIREG  +GIA TLRG VM++FLDRLINLGLPRT DF G+N NSFDGHGN++IG+R+Q VFPEI ++  GK  GMD+CI
Subjt:  LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVFPEIKFDTLGKPRGMDICI

Query:  TTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGR
         TTA+TD EA RLL L+GMPF E   S+ V+RKK+LK HHF SK +GR
Subjt:  TTTAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGR

Arabidopsis top hitse value%identityAlignment
AT2G42740.1 ribosomal protein large subunit 16A1.6e-0526.77Show/hide
Query:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS
        K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    T+RG        +L+  GL + ++++ L  N F   G + 
Subjt:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS

Query:  IGVREQSVFPEIKFDTLGKPRGMDICI
         G++E  +   IK+D      GMD  +
Subjt:  IGVREQSVFPEIKFDTLGKPRGMDICI

AT3G58700.1 Ribosomal L5P family protein1.6e-0526.77Show/hide
Query:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS
        K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    T+RG        +L+  GL + ++++ L  N F   G + 
Subjt:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS

Query:  IGVREQSVFPEIKFDTLGKPRGMDICI
         G++E  +   IK+D      GMD  +
Subjt:  IGVREQSVFPEIKFDTLGKPRGMDICI

AT4G01310.1 Ribosomal L5P family protein1.5e-9467.65Show/hide
Query:  MASSSLLSSATSSFHGH-SPF---FSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKI
        MAS SLL S+ SSFHG  SP     SAR  +P          PL   VK SA G  VLVEK+EAEK  RLK+ YL++I+P L +EF Y NIHQVPK++KI
Subjt:  MASSSLLSSATSSFHGH-SPF---FSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKI

Query:  VVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVRE
        VVNCGIGDA QN KGLEAAM ++A ITGQ+P+KTRA+ SIATFKIRE QPLGIA TLRG+VMYSFLDRLINL LPRTRDFQG++ +SFDG+GNYSIGV++
Subjt:  VVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVRE

Query:  QSVFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSAT--VMRKKKLKSHHFDSKSKGR
        Q VFPEI+FD +GK RGMD+CI+TTA++DQE Q+LLALMGMPFRE GG +T  ++RKKKLKSHHFD+K KG+
Subjt:  QSVFPEIKFDTLGKPRGMDICITTTAETDQEAQRLLALMGMPFRESGGSAT--VMRKKKLKSHHFDSKSKGR

AT4G18730.1 ribosomal protein L16B1.6e-0526.77Show/hide
Query:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS
        K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    T+RG        +L+  GL + ++++ L  N F   G + 
Subjt:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS

Query:  IGVREQSVFPEIKFDTLGKPRGMDICI
         G++E  +   IK+D      GMD  +
Subjt:  IGVREQSVFPEIKFDTLGKPRGMDICI

AT5G45775.1 Ribosomal L5P family protein1.6e-0526.77Show/hide
Query:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS
        K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    T+RG        +L+  GL + ++++ L  N F   G + 
Subjt:  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYS

Query:  IGVREQSVFPEIKFDTLGKPRGMDICI
         G++E  +   IK+D      GMD  +
Subjt:  IGVREQSVFPEIKFDTLGKPRGMDICI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTTCTTCGCTGTTAAGCTCCGCTACGTCGTCGTTTCACGGCCATTCCCCATTCTTCTCGGCTCGCTTTGCTGCACCGGTTGCCTTCGGAAACCCTAGCAATGT
AGCTCCATTGGCGGTGAGAGTGAAAGCCTCGGCTGGTGGTGCTATAGTGCTCGTGGAGAAGGCAGAGGCTGAGAAGGTCAGCCGGCTCAAGTCCAATTACCTCAAGAAAA
TTGTGCCGCTGCTTATGGATGAGTTCTCGTACACCAATATTCACCAGGTCCCCAAAATCGAGAAGATTGTGGTGAATTGTGGCATTGGAGATGCTCAACAGAATGCGAAG
GGTTTGGAAGCTGCAATGAATGAGTTGGCATCCATTACAGGACAACGACCTGTGAAAACACGTGCAAAGAAGTCCATTGCAACCTTCAAGATCAGGGAAGGTCAACCACT
TGGGATCGCTGCAACCCTACGGGGAAATGTGATGTACTCCTTCTTGGATCGTCTAATCAACTTGGGGCTGCCTAGGACAAGGGACTTTCAAGGACTGAATTCAAATAGCT
TTGATGGACATGGGAATTACTCTATCGGTGTCCGCGAACAGAGCGTGTTCCCAGAAATAAAGTTCGACACGCTCGGCAAACCGAGGGGAATGGACATTTGCATCACAACA
ACAGCTGAAACTGATCAAGAAGCTCAGCGACTCTTGGCTCTCATGGGAATGCCTTTCAGAGAGAGTGGTGGTTCTGCAACAGTGATGCGGAAAAAGAAGCTGAAGTCCCA
CCATTTTGATTCCAAATCCAAGGGAAGAGCTCGGAGGTAA
mRNA sequenceShow/hide mRNA sequence
AAACTTCTCTGTAACTCCGATGGCCTCTTCTTCGCTGTTAAGCTCCGCTACGTCGTCGTTTCACGGCCATTCCCCATTCTTCTCGGCTCGCTTTGCTGCACCGGTTGCCT
TCGGAAACCCTAGCAATGTAGCTCCATTGGCGGTGAGAGTGAAAGCCTCGGCTGGTGGTGCTATAGTGCTCGTGGAGAAGGCAGAGGCTGAGAAGGTCAGCCGGCTCAAG
TCCAATTACCTCAAGAAAATTGTGCCGCTGCTTATGGATGAGTTCTCGTACACCAATATTCACCAGGTCCCCAAAATCGAGAAGATTGTGGTGAATTGTGGCATTGGAGA
TGCTCAACAGAATGCGAAGGGTTTGGAAGCTGCAATGAATGAGTTGGCATCCATTACAGGACAACGACCTGTGAAAACACGTGCAAAGAAGTCCATTGCAACCTTCAAGA
TCAGGGAAGGTCAACCACTTGGGATCGCTGCAACCCTACGGGGAAATGTGATGTACTCCTTCTTGGATCGTCTAATCAACTTGGGGCTGCCTAGGACAAGGGACTTTCAA
GGACTGAATTCAAATAGCTTTGATGGACATGGGAATTACTCTATCGGTGTCCGCGAACAGAGCGTGTTCCCAGAAATAAAGTTCGACACGCTCGGCAAACCGAGGGGAAT
GGACATTTGCATCACAACAACAGCTGAAACTGATCAAGAAGCTCAGCGACTCTTGGCTCTCATGGGAATGCCTTTCAGAGAGAGTGGTGGTTCTGCAACAGTGATGCGGA
AAAAGAAGCTGAAGTCCCACCATTTTGATTCCAAATCCAAGGGAAGAGCTCGGAGGTAATGAATACATTTTAGGAACAAAGCTTTTACATTTCCTCAATTTCTTTGTTGT
ATCTTTACTAGAAAAAACAAAACTGTACTCTGGCAAATTTGTATGCCAATTTGATGAATTATAGAGGCTTGTTCATGAGATTAGTTGCATTAGCTCGGAAAGTCAATCCT
CAATTTCACAATCGTGACCAGACAAATTATTCAATGATGTGACTGTCTCATAATAATCGCGGGATGTGGATCCAATAAATTTCATGCCCC
Protein sequenceShow/hide protein sequence
MASSSLLSSATSSFHGHSPFFSARFAAPVAFGNPSNVAPLAVRVKASAGGAIVLVEKAEAEKVSRLKSNYLKKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAK
GLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGVREQSVFPEIKFDTLGKPRGMDICITT
TAETDQEAQRLLALMGMPFRESGGSATVMRKKKLKSHHFDSKSKGRARR