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Tan0006960 (gene) of Snake gourd v1 genome

Gene IDTan0006960
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:107002901..107003365
RNA-Seq ExpressionTan0006960
SyntenyTan0006960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607955.1 hypothetical protein SDJN03_01297, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1647.3Show/hide
Query:  MSQSANSRPTETTDDFDITKFPEIDKAFITSIWNEEQKNGQRPNQRRLANLIRSIEADISSPMEGLDSFTYSESSSSLSVAEQADVNPKSSSAGDIEMYV
        MS+S+ S  T+ TDD D + FPEID+AFIT+IWN+E+K  Q     RL  LIRSIEADI+ P E LDSFT +  SSS S                     
Subjt:  MSQSANSRPTETTDDFDITKFPEIDKAFITSIWNEEQKNGQRPNQRRLANLIRSIEADISSPMEGLDSFTYSESSSSLSVAEQADVNPKSSSAGDIEMYV

Query:  DLTSYSMIDEIAIRNDAREAKDLRIPEKKKVEVKREGDGNQSKQKSKK
        D  S   I E A R DA++ KD+R  ++K VE   EG G+ SKQKSKK
Subjt:  DLTSYSMIDEIAIRNDAREAKDLRIPEKKKVEVKREGDGNQSKQKSKK
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAGTCCGCGAACTCGAGGCCCACCGAAACCACGGACGACTTCGACATTACCAAATTCCCCGAAATCGACAAGGCCTTCATCACGTCGATATGGAACGAAGAACA
GAAGAACGGACAACGCCCCAATCAGAGGAGACTCGCGAACTTGATCCGATCAATCGAAGCTGATATCTCATCTCCAATGGAAGGACTCGATTCATTCACGTATAGTGAAT
CATCATCCTCGCTTTCCGTCGCAGAACAGGCGGACGTCAATCCCAAGAGTTCATCGGCCGGCGACATTGAAATGTACGTCGACTTGACATCGTACTCGATGATCGATGAG
ATTGCGATACGGAACGATGCTCGAGAAGCAAAGGATCTTCGCATTCCTGAGAAGAAAAAGGTAGAAGTGAAGCGCGAAGGAGATGGGAATCAGAGTAAACAGAAATCGAA
GAAAGGCCACCAGAGGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAGTCCGCGAACTCGAGGCCCACCGAAACCACGGACGACTTCGACATTACCAAATTCCCCGAAATCGACAAGGCCTTCATCACGTCGATATGGAACGAAGAACA
GAAGAACGGACAACGCCCCAATCAGAGGAGACTCGCGAACTTGATCCGATCAATCGAAGCTGATATCTCATCTCCAATGGAAGGACTCGATTCATTCACGTATAGTGAAT
CATCATCCTCGCTTTCCGTCGCAGAACAGGCGGACGTCAATCCCAAGAGTTCATCGGCCGGCGACATTGAAATGTACGTCGACTTGACATCGTACTCGATGATCGATGAG
ATTGCGATACGGAACGATGCTCGAGAAGCAAAGGATCTTCGCATTCCTGAGAAGAAAAAGGTAGAAGTGAAGCGCGAAGGAGATGGGAATCAGAGTAAACAGAAATCGAA
GAAAGGCCACCAGAGGAAGAAGTGA
Protein sequenceShow/hide protein sequence
MSQSANSRPTETTDDFDITKFPEIDKAFITSIWNEEQKNGQRPNQRRLANLIRSIEADISSPMEGLDSFTYSESSSSLSVAEQADVNPKSSSAGDIEMYVDLTSYSMIDE
IAIRNDAREAKDLRIPEKKKVEVKREGDGNQSKQKSKKGHQRKK