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Tan0006961 (gene) of Snake gourd v1 genome

Gene IDTan0006961
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncarbon catabolite repressor protein 4 homolog 1-like
Genome locationLG05:82899099..82906490
RNA-Seq ExpressionTan0006961
SyntenyTan0006961
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0004519 - endonuclease activity (molecular function)
GO:0004527 - exonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645782.1 hypothetical protein Csa_017169 [Cucumis sativus]1.6e-1389.13Show/hide
Query:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
        + VVRV+LPSDIPIVGCELTPYVLH+RPDKNISTDDVSESAPLD Q
Subjt:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
KAE8651127.1 hypothetical protein Csa_002360 [Cucumis sativus]1.6e-1389.13Show/hide
Query:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
        + VVRV+LPSDIPIVGCELTPYVLH+RPDKNISTDDVSESAPLD Q
Subjt:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
XP_008443012.1 PREDICTED: carbon catabolite repressor protein 4 homolog 1-like [Cucumis melo]1.6e-1389.13Show/hide
Query:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
        + VVRV+LPSDIPIVGCELTPYVLH+RPDKNISTDDVSESAPLD Q
Subjt:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
XP_031738111.1 carbon catabolite repressor protein 4 homolog 1 [Cucumis sativus]1.6e-1389.13Show/hide
Query:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
        + VVRV+LPSDIPIVGCELTPYVLH+RPDKNISTDDVSESAPLD Q
Subjt:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
XP_038904077.1 carbon catabolite repressor protein 4 homolog 1-like [Benincasa hispida]1.6e-1389.13Show/hide
Query:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
        + VVRV+LPSDIPIVGCELTPYVLH+RPDKNISTDDVSESAPLD Q
Subjt:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
TrEMBL top hitse value%identityAlignment
A0A0A0LB77 Uncharacterized protein8.0e-1489.13Show/hide
Query:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
        + VVRV+LPSDIPIVGCELTPYVLH+RPDKNISTDDVSESAPLD Q
Subjt:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
A0A1S3B722 carbon catabolite repressor protein 4 homolog 1-like8.0e-1489.13Show/hide
Query:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
        + VVRV+LPSDIPIVGCELTPYVLH+RPDKNISTDDVSESAPLD Q
Subjt:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
A0A6J1DCZ0 carbon catabolite repressor protein 4 homolog 1-like1.8e-1386.96Show/hide
Query:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
        + VVRV+LPSDIPIVGCELTPYVLH+RPDKNI+TDDVSESAPLD Q
Subjt:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
A0A6J1F264 carbon catabolite repressor protein 4 homolog 1-like1.4e-1386.96Show/hide
Query:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
        + VVRV+LPSDIPIVGCELTPYVLH+RPDKNISTDDVSESAP+D Q
Subjt:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
A0A6J1IXT3 carbon catabolite repressor protein 4 homolog 1-like1.4e-1386.96Show/hide
Query:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
        + VVRV+LPSDIPIVGCELTPYVLH+RPDKNISTDDVSESAP+D Q
Subjt:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQ
SwissProt top hitse value%identityAlignment
Q8W0Z9 Carbon catabolite repressor protein 4 homolog 12.7e-1159.68Show/hide
Query:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQVVSSSSLLLNMNWFLV
        + V+RV+LPS+IPIVGCELTPYVL +RPDK  STDDV ESAPL+          L   WF V
Subjt:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQVVSSSSLLLNMNWFLV
Q9M2F8 Carbon catabolite repressor protein 4 homolog 24.2e-1275Show/hide
Query:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLD
        + V+RV+LPS+IPIVGCELTPYVL +RPDKN +TDDV ESAPL+
Subjt:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLD
Arabidopsis top hitse value%identityAlignment
AT3G58560.1 DNAse I-like superfamily protein1.9e-1259.68Show/hide
Query:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQVVSSSSLLLNMNWFLV
        + V+RV+LPS+IPIVGCELTPYVL +RPDK  STDDV ESAPL+          L   WF V
Subjt:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQVVSSSSLLLNMNWFLV
AT3G58580.1 DNAse I-like superfamily protein3.0e-1375Show/hide
Query:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLD
        + V+RV+LPS+IPIVGCELTPYVL +RPDKN +TDDV ESAPL+
Subjt:  IGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATGGTACTGGCTTTCAGTGCCACATTTTTCCTGTTCTATGGCAAAGATATGGCTTGGGTTTCATTGGTAATTGCTGGAATGGCTATTGTTCCAGTTTACTTTTT
GACTGGTCGTGCTGTGACGATTGGCGTGGTACGCGTGTACCTGCCCTCTGATATTCCTATTGTAGGTTGCGAACTCACGCCCTACGTGCTCCATCAACGACCTGATAAGA
ACATCAGTACCGATGATGTTTCTGAGTCCGCTCCACTTGACGTTCAAGTGGTAAGTTCGAGTAGTCTGTTGCTGAATATGAATTGGTTTTTAGTCTTTGGAACTTTCGTT
TATTTGGCTGTTTACTACTTTACGGTCGTGGTACTTCAATTGGATGTGTTTGGGGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCATGGTACTGGCTTTCAGTGCCACATTTTTCCTGTTCTATGGCAAAGATATGGCTTGGGTTTCATTGGTAATTGCTGGAATGGCTATTGTTCCAGTTTACTTTTT
GACTGGTCGTGCTGTGACGATTGGCGTGGTACGCGTGTACCTGCCCTCTGATATTCCTATTGTAGGTTGCGAACTCACGCCCTACGTGCTCCATCAACGACCTGATAAGA
ACATCAGTACCGATGATGTTTCTGAGTCCGCTCCACTTGACGTTCAAGTGGTAAGTTCGAGTAGTCTGTTGCTGAATATGAATTGGTTTTTAGTCTTTGGAACTTTCGTT
TATTTGGCTGTTTACTACTTTACGGTCGTGGTACTTCAATTGGATGTGTTTGGGGTCTAG
Protein sequenceShow/hide protein sequence
MSMVLAFSATFFLFYGKDMAWVSLVIAGMAIVPVYFLTGRAVTIGVVRVYLPSDIPIVGCELTPYVLHQRPDKNISTDDVSESAPLDVQVVSSSSLLLNMNWFLVFGTFV
YLAVYYFTVVVLQLDVFGV