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Tan0006977 (gene) of Snake gourd v1 genome

Gene IDTan0006977
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionVQ motif-containing protein
Genome locationLG08:59467668..59467928
RNA-Seq ExpressionTan0006977
SyntenyTan0006977
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25
IPR039834 - VQ motif-containing protein 17/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017559.1 VQ motif-containing protein 25, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-1764.29Show/hide
Query:  MDAIMNNQALLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIPVETEAAARA
        M+AIM  + LL NSAR AAM VH +SH ISKPKPKIRIIHIF PEIIKT+VANF ELVQRL GKP A  + + +P +    A A
Subjt:  MDAIMNNQALLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIPVETEAAARA

XP_022935342.1 VQ motif-containing protein 25-like [Cucurbita moschata]2.8e-1765.48Show/hide
Query:  MDAIMNNQALLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIPVETEAAARA
        M+AIM  +ALL NSAR AAM VH +SH ISKPKPKIRIIHIF PEIIKT+VANF ELVQRL GKP A  + + +P +    A A
Subjt:  MDAIMNNQALLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIPVETEAAARA

XP_022983122.1 VQ motif-containing protein 25-like [Cucurbita maxima]6.2e-1764.29Show/hide
Query:  MDAIMNNQALLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIPVETEAAARA
        M+AIM  +ALL NSAR  AM +H +SH ISKPKPKIRIIHIF PEIIKT+VANF ELVQRL GKP A  + + +P +   AA A
Subjt:  MDAIMNNQALLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIPVETEAAARA

XP_023528893.1 VQ motif-containing protein 25-like [Cucurbita pepo subsp. pepo]8.1e-1764.29Show/hide
Query:  MDAIMNNQALLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIPVETEAAARA
        M+AIM  + LL NSAR AAM VH +SH ISKPKPKIRIIHIF PEIIKT+VANF ELVQRL GKP A  + + +P +    A A
Subjt:  MDAIMNNQALLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIPVETEAAARA

XP_038906267.1 VQ motif-containing protein 25 [Benincasa hispida]1.1e-1666.67Show/hide
Query:  MDAIMNNQA--LLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKP---KAMIDSEEIPVETEAAA
        MDAI+  Q   LLPNSA  AAM +H +SH ISKPKPKIRIIHIF PEIIKT+VANF ELVQRL GKP   +  I  EEI  ET A A
Subjt:  MDAIMNNQA--LLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKP---KAMIDSEEIPVETEAAA

TrEMBL top hitse value%identityAlignment
A0A0A0LBB1 VQ domain-containing protein3.3e-1667.12Show/hide
Query:  LLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIPVETEAAA
        LLP SAR ++M +H +SH ISKPKPKIRIIHIF PEIIKT+VANF ELVQRL GKP+A  D + +P E   AA
Subjt:  LLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIPVETEAAA

A0A1S3B6P9 VQ motif-containing protein 25-like1.1e-1661.36Show/hide
Query:  MDAIMNNQA----LLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEE--IPVETEAAA
        MDAI+ NQ     LLP S R + M +H +SH ISKPKPKIRIIHIF PEIIKT+VANF ELVQRL GKP+A+   E+  +P +  AAA
Subjt:  MDAIMNNQA----LLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEE--IPVETEAAA

A0A5A7TRB0 VQ motif-containing protein 25-like1.1e-1661.36Show/hide
Query:  MDAIMNNQA----LLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEE--IPVETEAAA
        MDAI+ NQ     LLP S R + M +H +SH ISKPKPKIRIIHIF PEIIKT+VANF ELVQRL GKP+A+   E+  +P +  AAA
Subjt:  MDAIMNNQA----LLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEE--IPVETEAAA

A0A6J1F598 VQ motif-containing protein 25-like1.4e-1765.48Show/hide
Query:  MDAIMNNQALLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIPVETEAAARA
        M+AIM  +ALL NSAR AAM VH +SH ISKPKPKIRIIHIF PEIIKT+VANF ELVQRL GKP A  + + +P +    A A
Subjt:  MDAIMNNQALLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIPVETEAAARA

A0A6J1IYE1 VQ motif-containing protein 25-like3.0e-1764.29Show/hide
Query:  MDAIMNNQALLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIPVETEAAARA
        M+AIM  +ALL NSAR  AM +H +SH ISKPKPKIRIIHIF PEIIKT+VANF ELVQRL GKP A  + + +P +   AA A
Subjt:  MDAIMNNQALLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIPVETEAAARA

SwissProt top hitse value%identityAlignment
O48522 VQ motif-containing protein 173.8e-0964.44Show/hide
Query:  MVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGK
        + +H+ S  ++K KPKIRIIHIF PEIIKT+VANF E+VQ L GK
Subjt:  MVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGK

O64868 VQ motif-containing protein 181.7e-0965.31Show/hide
Query:  SAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKP
        S+ + ++R+S VISK KPKIRIIHIF PE+IKT+V NF  LVQ L GKP
Subjt:  SAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKP

Q9M2P8 VQ motif-containing protein 255.3e-1160.34Show/hide
Query:  AAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIP
        +++ VH+ S+ I+K KPKIRIIHIF PEIIKT+VANF ELVQ L GKP     S+  P
Subjt:  AAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIP

Arabidopsis top hitse value%identityAlignment
AT2G42140.1 VQ motif-containing protein2.7e-1064.44Show/hide
Query:  MVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGK
        + +H+ S  ++K KPKIRIIHIF PEIIKT+VANF E+VQ L GK
Subjt:  MVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGK

AT2G44340.1 VQ motif-containing protein1.2e-1065.31Show/hide
Query:  SAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKP
        S+ + ++R+S VISK KPKIRIIHIF PE+IKT+V NF  LVQ L GKP
Subjt:  SAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKP

AT3G58000.1 VQ motif-containing protein3.8e-1260.34Show/hide
Query:  AAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIP
        +++ VH+ S+ I+K KPKIRIIHIF PEIIKT+VANF ELVQ L GKP     S+  P
Subjt:  AAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIP

AT3G60090.1 VQ motif-containing protein3.9e-0962.22Show/hide
Query:  VHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPK
        ++++S +I+K KPKIRIIHIF PEII T+V NF  LVQ L GKP+
Subjt:  VHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCGATTATGAACAATCAAGCTTTGTTGCCCAACTCCGCTCGTTCGGCGGCCATGGTTGTCCATAGATCTTCACACGTCATTTCCAAGCCCAAACCCAAAATTCG
TATAATTCACATCTTCGTGCCGGAGATCATCAAAACCAACGTCGCCAATTTCTGCGAGCTCGTTCAGAGGCTCATTGGAAAGCCGAAGGCGATGATTGATTCGGAAGAAA
TTCCCGTGGAGACGGAGGCGGCGGCGCGTGCCGGAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCGATTATGAACAATCAAGCTTTGTTGCCCAACTCCGCTCGTTCGGCGGCCATGGTTGTCCATAGATCTTCACACGTCATTTCCAAGCCCAAACCCAAAATTCG
TATAATTCACATCTTCGTGCCGGAGATCATCAAAACCAACGTCGCCAATTTCTGCGAGCTCGTTCAGAGGCTCATTGGAAAGCCGAAGGCGATGATTGATTCGGAAGAAA
TTCCCGTGGAGACGGAGGCGGCGGCGCGTGCCGGAGGGTGA
Protein sequenceShow/hide protein sequence
MDAIMNNQALLPNSARSAAMVVHRSSHVISKPKPKIRIIHIFVPEIIKTNVANFCELVQRLIGKPKAMIDSEEIPVETEAAARAGG