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Tan0006978 (gene) of Snake gourd v1 genome

Gene IDTan0006978
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein NIM1-INTERACTING 3-like
Genome locationLG08:6893412..6894146
RNA-Seq ExpressionTan0006978
SyntenyTan0006978
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599168.1 hypothetical protein SDJN03_08946, partial [Cucurbita argyrosperma subsp. sororia]7.9e-3270Show/hide
Query:  MEGGRK-RKLQNI-ENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIKSKESA-QDEKSKGVWNPKFHPEDFMEDGYD--KNKSNINFQLPAASSS
        MEGGRK RKLQNI E+++ EEE+E+EDEDEEEKMKLFFALIQNTKAMR++IKSKESA +D  +KGVWNPKF PEDF+EDG+D  K+KS    +L AASSS
Subjt:  MEGGRK-RKLQNI-ENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIKSKESA-QDEKSKGVWNPKFHPEDFMEDGYD--KNKSNINFQLPAASSS

Query:  STKQSNQKEE-----EQQEQQEDKQKVGEEKKGLDLNLSL
        +TKQSNQKEE     E QE QE ++++ E KKGLDLNLSL
Subjt:  STKQSNQKEE-----EQQEQQEDKQKVGEEKKGLDLNLSL

KGN61024.1 hypothetical protein Csa_021295 [Cucumis sativus]6.3e-2164.44Show/hide
Query:  MEGGRKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIK-SKESAQDEKSKGVWNPKFHPEDF-MEDGYD-KNKSN-INFQLPAASSSS
        ME GRKR+      + QEEEEEEED    EKM+LF+ALIQNTKAMR+ +K SKE  ++EKSKGVWNPKF PEDF  EDGY+  NKSN I  QL AASSS+
Subjt:  MEGGRKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIK-SKESAQDEKSKGVWNPKFHPEDF-MEDGYD-KNKSN-INFQLPAASSSS

Query:  TKQSNQKEEEQQEQQEDKQ-KVGEEKKGLDLNLSL
        TKQ N+K    ++Q+EDK  KV E KKGLDLNLSL
Subjt:  TKQSNQKEEEQQEQQEDKQ-KVGEEKKGLDLNLSL

XP_038889660.1 protein NIM1-INTERACTING 3 isoform X1 [Benincasa hispida]6.5e-2667.8Show/hide
Query:  MEGGRKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIKSKESAQDEKSKGVWNPKFHPEDFMEDGYDKNKSNINFQLPAASSSSTKQS
        ME GRKR+        + EEEEEED+DEE +MKL FALIQN KAMR R+KSKES ++EKSKGVWNPKF PEDF+EDGY  NKSNI  QLPAASSS+TK S
Subjt:  MEGGRKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIKSKESAQDEKSKGVWNPKFHPEDFMEDGYDKNKSNINFQLPAASSSSTKQS

Query:  NQKEEEQQEQQEDKQKVG
        N K+E  Q++Q+DK KVG
Subjt:  NQKEEEQQEQQEDKQKVG

XP_038889661.1 protein NIM1-INTERACTING 3 isoform X2 [Benincasa hispida]7.2e-2566.67Show/hide
Query:  MEGGRKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIKSKESAQDEKSKGVWNPKFHPEDFMEDGYDKNKSNINFQLPAASSSSTKQS
        ME GRKR+        + EEEEEED+DEE +MKL FALIQN KAMR R+KSKES ++EKSKGVWNPKF PEDF+EDGY  NKSNI  QLPAASSS+TK S
Subjt:  MEGGRKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIKSKESAQDEKSKGVWNPKFHPEDFMEDGYDKNKSNINFQLPAASSSSTKQS

Query:  NQKEEEQQEQQEDK
        N K+E+Q++Q + K
Subjt:  NQKEEEQQEQQEDK

XP_038889662.1 protein NIM1-INTERACTING 3 isoform X3 [Benincasa hispida]7.2e-2566.67Show/hide
Query:  MEGGRKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIKSKESAQDEKSKGVWNPKFHPEDFMEDGYDKNKSNINFQLPAASSSSTKQS
        ME GRKR+        + EEEEEED+DEE +MKL FALIQN KAMR R+KSKES ++EKSKGVWNPKF PEDF+EDGY  NKSNI  QLPAASSS+TK S
Subjt:  MEGGRKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIKSKESAQDEKSKGVWNPKFHPEDFMEDGYDKNKSNINFQLPAASSSSTKQS

Query:  NQKEEEQQEQQEDK
        N K+E+Q++Q + K
Subjt:  NQKEEEQQEQQEDK

TrEMBL top hitse value%identityAlignment
A0A061F4Z3 Uncharacterized protein4.9e-1146.85Show/hide
Query:  MEGGR-KRKLQNIENEEQEEEEEEED--EDEEEKMKLFFALIQNTKAMRERIK-----SKESAQDEKSK-----GVWNPKFHPEDFMEDGYDKNKSNINF
        ME GR KRK+ N E EE +EEEEEED  E+EEEK++ FFALI++T+ MR+R++     SKE  + +K +      VWNPKF PEDFMED   KN   +N 
Subjt:  MEGGR-KRKLQNIENEEQEEEEEEED--EDEEEKMKLFFALIQNTKAMRERIK-----SKESAQDEKSK-----GVWNPKFHPEDFMEDGYDKNKSNINF

Query:  QLPAASSSSTKQSNQKEEEQQEQQEDKQKVGEEKKGLDLNLSL
          P+        SN+++E+ Q+ +E     G E  GLDL LSL
Subjt:  QLPAASSSSTKQSNQKEEEQQEQQEDKQKVGEEKKGLDLNLSL

A0A0A0LJ23 Uncharacterized protein3.0e-2164.44Show/hide
Query:  MEGGRKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIK-SKESAQDEKSKGVWNPKFHPEDF-MEDGYD-KNKSN-INFQLPAASSSS
        ME GRKR+      + QEEEEEEED    EKM+LF+ALIQNTKAMR+ +K SKE  ++EKSKGVWNPKF PEDF  EDGY+  NKSN I  QL AASSS+
Subjt:  MEGGRKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIK-SKESAQDEKSKGVWNPKFHPEDF-MEDGYD-KNKSN-INFQLPAASSSS

Query:  TKQSNQKEEEQQEQQEDKQ-KVGEEKKGLDLNLSL
        TKQ N+K    ++Q+EDK  KV E KKGLDLNLSL
Subjt:  TKQSNQKEEEQQEQQEDKQ-KVGEEKKGLDLNLSL

A0A4S4D4I8 Uncharacterized protein3.5e-0940.58Show/hide
Query:  RKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIKS--KESAQDEKSKG----VWNPKFHPEDFMEDGYDKNK------SNINFQLPAA
        RKRK++N           EE++D+EEKM+ FFALI++T+  RER+ S  ++  ++EK KG     WNP F PEDFME G D++K      +++   L  A
Subjt:  RKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIKS--KESAQDEKSKG----VWNPKFHPEDFMEDGYDKNK------SNINFQLPAA

Query:  SSSSTKQSNQKEEEQQEQQEDKQKVGEEKKGLDLNLSL
          S  ++   KE+EQ+E+++ K   G +  GLDL LSL
Subjt:  SSSSTKQSNQKEEEQQEQQEDKQKVGEEKKGLDLNLSL

A0A6J1DQG7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110232841.4e-1859.84Show/hide
Query:  RKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIKSKESA-QDEKSKGVWNPKFHPEDFMEDGYDKNKSNINFQLPAASSSSTKQSNQK
        RKRKLQ     + E+E ++EDE+EEEKMKLFFALIQNTK++R+R+KSK+SA Q +KSKGVWNPKF PEDF+ED   K+     F    A+SSSTKQ N++
Subjt:  RKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIKSKESA-QDEKSKGVWNPKFHPEDFMEDGYDKNKSNINFQLPAASSSSTKQSNQK

Query:  EEEQQEQQEDKQKVGEEKKGLDLNLSL
        EEE+Q     K KV E  + LDLNLSL
Subjt:  EEEQQEQQEDKQKVGEEKKGLDLNLSL

A0A6P5YP56 protein NIM1-INTERACTING 3-like4.9e-1141.55Show/hide
Query:  MEGGRKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIKS-----------KESAQDEKS-KGVWNPKFHPEDFMEDGYDKNKSNINFQ
        ME G+KRK++N      E+EEE +DE+EEEK+K FFALI++T+ MR+R+++           K+  Q+EKS   +WNPKF PEDFMED   KN  ++N  
Subjt:  MEGGRKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIKS-----------KESAQDEKS-KGVWNPKFHPEDFMEDGYDKNKSNINFQ

Query:  LPAASSSSTKQSNQKEEEQQEQQEDKQKVGEEKKGLDLNLSL
         P++               + +QE + K G E   LDL LSL
Subjt:  LPAASSSSTKQSNQKEEEQQEQQEDKQKVGEEKKGLDLNLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAGGAAGAAAAAGAAAACTTCAAAACATTGAGAATGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGATGAAGATGAAGAGGAAAAGATGAAATTGTTCTTTGC
TCTGATTCAAAACACTAAAGCCATGAGAGAGAGAATCAAGTCAAAAGAATCAGCACAAGATGAAAAATCAAAAGGGGTTTGGAATCCAAAGTTTCACCCAGAAGATTTCA
TGGAAGATGGCTATGACAAGAACAAATCCAACATCAACTTTCAATTACCAGCTGCTTCATCTTCATCAACAAAACAGAGCAATCAAAAAGAAGAAGAACAACAAGAACAA
CAAGAAGATAAACAAAAGGTTGGAGAAGAAAAAAAAGGCCTTGACCTTAATCTCTCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
GTAAAGTTCAACGTATCTCTGCAAAAGCTCTGTCTACAACATTTCAATCTGAACCATCTCTTTTTCTTTCTCTCTCTGTGTAATTCATTTTCCACCATTGAAGCAGAGCC
AGCCATGGAAGGAGGAAGAAAAAGAAAACTTCAAAACATTGAGAATGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGATGAAGATGAAGAGGAAAAGATGAAATTGTTCT
TTGCTCTGATTCAAAACACTAAAGCCATGAGAGAGAGAATCAAGTCAAAAGAATCAGCACAAGATGAAAAATCAAAAGGGGTTTGGAATCCAAAGTTTCACCCAGAAGAT
TTCATGGAAGATGGCTATGACAAGAACAAATCCAACATCAACTTTCAATTACCAGCTGCTTCATCTTCATCAACAAAACAGAGCAATCAAAAAGAAGAAGAACAACAAGA
ACAACAAGAAGATAAACAAAAGGTTGGAGAAGAAAAAAAAGGCCTTGACCTTAATCTCTCTCTTTGATTTTTTGTTTTTTTTTGGTTCTTTTCTGTTTAATTAACAGTGT
TTTATGATGCGTTGCTTTTGATTTTTCTTGATTTTAATTTAAAAGCATCTTAGCCATTTTGTTTCTTTTTTTTGAGATTGCTCTGTTTTTTCGGGTTCTGTTTCTATTGA
GCATTTGAAGAAGTTTTCTTTTATTATTTTGAGTGGCACTCCATCATTGATTTCAAGGGAAAAGTTAAAGATAAG
Protein sequenceShow/hide protein sequence
MEGGRKRKLQNIENEEQEEEEEEEDEDEEEKMKLFFALIQNTKAMRERIKSKESAQDEKSKGVWNPKFHPEDFMEDGYDKNKSNINFQLPAASSSSTKQSNQKEEEQQEQ
QEDKQKVGEEKKGLDLNLSL