; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007009 (gene) of Snake gourd v1 genome

Gene IDTan0007009
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionserine/arginine-rich splicing factor RS40-like
Genome locationLG01:19070493..19073417
RNA-Seq ExpressionTan0007009
SyntenyTan0007009
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596928.1 Serine/arginine-rich splicing factor RS40, partial [Cucurbita argyrosperma subsp. sororia]9.5e-17689.23Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT
        MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSR+SSTNTRPSKT
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT

Query:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR
        LFVINFDPYHTRTRDLE+HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKL+DRVISVEYAVRDDDEKR+GYSPDR  DRSPDRKRRSPSP+R
Subjt:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR

Query:  RERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPY-RRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRE
        RERGSPDYG NGISRSPY++QRASPDYGSRRSPSPYQRD +RGSPDYGR RSPN SPY RRERERS+DHVRAP HS  HQRE AN+D VPNR CSPY RE
Subjt:  RERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPY-RRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRE

Query:  RGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE
        R SPT  R SSYSPRDRERS P NGHDQRL T+ EP DSPS+GGT+SPKHRGY+SRSP+AEE
Subjt:  RGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE

XP_011650503.1 serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus]5.0e-17789.1Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP----GGGGGGSRKSSTNTR
        MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREFGRKGRRLRVEWTKQERGIRRP    GG GGGSR+SSTNTR
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP----GGGGGGSRKSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        PSKTLFVINFDPYHTR RDLE+HFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
Subjt:  PSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPY
        SPYRRERGSPDYG NGISRSPYRRQRASPDYGSRRSPSPYQR+R+RGSPDY RGRSP HSPYRRERERSSDH+RAPSHSP HQRER NDDR+PNRS SPY
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPY

Query:  R--RERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE
        R  RERGSP  GRG SYSPRDRER  P NGHD +  T+AEP + PSY GTQSPKHRGYNSRSPQAEE
Subjt:  R--RERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE

XP_022159582.1 serine/arginine-rich splicing factor RS40-like isoform X1 [Momordica charantia]7.5e-18193.15Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP--GGGGGGSRKSSTNTRPS
        MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP  GGGGGGSR+SSTNTRPS
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP--GGGGGGSRKSSTNTRPS

Query:  KTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSP
        KTLFVINFDPYHTRTRDLE+HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSP
Subjt:  KTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSP

Query:  YRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHS-PLHQRERANDDRVPNRSCSPYR
        YRRERGSPDYG NGI+RSPYRRQRASPDYGSRRSPSPYQR+RD  SPDYGRGRSPNHSPYRRERERSSDHVR PSHS P HQRERANDDRV NRS SPY 
Subjt:  YRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHS-PLHQRERANDDRVPNRSCSPYR

Query:  RERGSPTDGRGSSYS-PRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE
        RERGSPTDGRG+SYS PRD ERS P NGH+QRL T+AEP DSPSYGGTQSP HRGYNSRSPQAEE
Subjt:  RERGSPTDGRGSSYS-PRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE

XP_038904888.1 serine/arginine-rich splicing factor RS40-like isoform X1 [Benincasa hispida]6.8e-18291.58Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP------GGGGGGSRKSSTN
        MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP      GGGGGGSR+SSTN
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP------GGGGGGSRKSSTN

Query:  TRPSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
        TRPSKTLFVINFDPYHTRTRDLE+HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+KRNGYSPDRNRDRSPDRKRR
Subjt:  TRPSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCS
        SPSPYRRERGSPDYG NGISRSPYRRQRASPDYGSRRSPSPYQR+R+RGSPDYGRGRSPNHSPYRRERERSSD VRAPSHSP HQRER NDDRV NRS S
Subjt:  SPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCS

Query:  PYRRERGSPTDGRGSSYSPRDRERSI-PGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE
        PY RERGSPTDGRG+SYSPRDRERS  P NGHDQ+  T+ EP +SPSYGGTQSPKHRGY SRSPQAEE
Subjt:  PYRRERGSPTDGRGSSYSPRDRERSI-PGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE

XP_038904894.1 serine/arginine-rich splicing factor RS40-like isoform X2 [Benincasa hispida]5.0e-17789.53Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT
        MKPIFCGNFE+DARQPDLERLF RYGKVDRVDMKSGFAFIYM+DER+ EDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSR+SSTNTRPSKT
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT

Query:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR
        LFVINFDPYHTRTRDLE+HFDPYGKIL+VRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRN D+SP+R+RRSPSPYR
Subjt:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR

Query:  RERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPY--RR
        RERGSPDYG NGISRSPYRRQRASP YGSRRSPSPYQR+R+RGSPDYGRGRSPNHSPYRRERE SSDH+RAPSHSP HQRER NDDRVPNRS SPY   R
Subjt:  RERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPY--RR

Query:  ERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE
        ERGSPT GR + Y PRDRERS P NGHDQR  T  EP +SPSYGGTQSPK RGYNSRSPQAEE
Subjt:  ERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE

TrEMBL top hitse value%identityAlignment
A0A0A0L7I3 Uncharacterized protein6.0e-17688.86Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP----GGGGGGSRKSSTNTR
        MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREFGRKGRRLRVEWTKQERGIRRP    GG GGGSR+SSTNTR
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP----GGGGGGSRKSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        PSKTLFVINFDPYHTR RDLE+HFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
Subjt:  PSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPY
        SPYRRERGSPDYG NGISRSPYRRQRASPDYGSRRSPSPYQR+R+RGSPDY RGRSP HSPYRRERERSSDH+RAPSHSP HQRER NDDR+PNRS SPY
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPY

Query:  R--RERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYN-SRSPQAEE
        R  RERGSP  GRG SYSPRDRER  P NGHD +  T+AEP + PSY GTQSPKHRGYN SRSPQAEE
Subjt:  R--RERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYN-SRSPQAEE

A0A1S3BLX3 serine/arginine-rich splicing factor RS40-like isoform X23.0e-17588.59Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP----GGGGGGSRKSSTNTR
        MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREFGRKGRRLRVEWTKQERGIRRP    GG GGGSR+SS+NTR
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP----GGGGGGSRKSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        PSKTLFVINFDPYHTR RDLE+HFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
Subjt:  PSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPY
        SPYRRERGSPDYG NGISRSPYRRQR SPDYGSRRSPSPYQR+R+RGSPDYGRGRSP HSPYRRERERSSDH RAPS SPLHQRER N DR+PNRS SPY
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPY

Query:  R--RERGSP-TDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE
        R  RER SP  DGRG+SYSPRDRERS P NGHD +  T+AEP + PSY GTQSPKHRGYNSRSPQAEE
Subjt:  R--RERGSP-TDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE

A0A1S4DXA1 serine/arginine-rich splicing factor RS40-like isoform X14.6e-17688.13Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP----------GGGGGGSRK
        MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP          GGGGGGSR+
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP----------GGGGGGSRK

Query:  SSTNTRPSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD
        SSTNTRPSKTLFVINFDPYHTRTRDLE+HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+KRNGYSPDRNRDRSPD
Subjt:  SSTNTRPSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD

Query:  RKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVR-APSHSPLHQRERANDDRVP
        RKRRSPSPYRRERGSPDYG NGISRSPYRRQRASPDYGSRRSPSPYQR+R+RGSPDYGRGRSPNHSPYRRERERSSDHVR APS+ P HQRER NDDRVP
Subjt:  RKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVR-APSHSPLHQRERANDDRVP

Query:  NRSCSPYRRER--GSPTDGRGSSYSPRDRERSI-PGN----GHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE
        NRS SPY RER  GSPTDGRG+SYSPRDRERS  P N    GHDQ+   + EP +SP+YG TQSPKHRGY+SRSPQAEE
Subjt:  NRSCSPYRRER--GSPTDGRGSSYSPRDRERSI-PGN----GHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE

A0A5A7VJB8 Serine/arginine-rich splicing factor RS40-like isoform X14.6e-17688.13Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP----------GGGGGGSRK
        MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP          GGGGGGSR+
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP----------GGGGGGSRK

Query:  SSTNTRPSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD
        SSTNTRPSKTLFVINFDPYHTRTRDLE+HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+KRNGYSPDRNRDRSPD
Subjt:  SSTNTRPSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD

Query:  RKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVR-APSHSPLHQRERANDDRVP
        RKRRSPSPYRRERGSPDYG NGISRSPYRRQRASPDYGSRRSPSPYQR+R+RGSPDYGRGRSPNHSPYRRERERSSDHVR APS+ P HQRER NDDRVP
Subjt:  RKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVR-APSHSPLHQRERANDDRVP

Query:  NRSCSPYRRER--GSPTDGRGSSYSPRDRERSI-PGN----GHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE
        NRS SPY RER  GSPTDGRG+SYSPRDRERS  P N    GHDQ+   + EP +SP+YG TQSPKHRGY+SRSPQAEE
Subjt:  NRSCSPYRRER--GSPTDGRGSSYSPRDRERSI-PGN----GHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE

A0A6J1E078 serine/arginine-rich splicing factor RS40-like isoform X13.6e-18193.15Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP--GGGGGGSRKSSTNTRPS
        MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP  GGGGGGSR+SSTNTRPS
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP--GGGGGGSRKSSTNTRPS

Query:  KTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSP
        KTLFVINFDPYHTRTRDLE+HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSP
Subjt:  KTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSP

Query:  YRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHS-PLHQRERANDDRVPNRSCSPYR
        YRRERGSPDYG NGI+RSPYRRQRASPDYGSRRSPSPYQR+RD  SPDYGRGRSPNHSPYRRERERSSDHVR PSHS P HQRERANDDRV NRS SPY 
Subjt:  YRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHS-PLHQRERANDDRVPNRSCSPYR

Query:  RERGSPTDGRGSSYS-PRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE
        RERGSPTDGRG+SYS PRD ERS P NGH+QRL T+AEP DSPSYGGTQSP HRGYNSRSPQAEE
Subjt:  RERGSPTDGRGSSYS-PRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE

SwissProt top hitse value%identityAlignment
P92964 Serine/arginine-rich splicing factor RS315.0e-7156.79Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT
        M+P+F GNFEY+ RQ DLERLF +YG+VDRVDMKSG+AF+Y EDERDAEDAIR LD   FG + RRL VEW K ERG  R      G  K+ +N +P+KT
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT

Query:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR
        LFVINFDP  T+  D+EKHF+PYGK+ +VRIRRNF+FVQ+E QEDAT+ALE T  SK++DRV+SVEYA++DDDE+      DRN  RSP   RRS SP  
Subjt:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR

Query:  RERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNH----SPYRRERERSSDHVRAPSHSP
        R R SPDYG      SP + +R SPDYG  RSP   + DR +G   Y R RSP++    S Y R+R    D  R+ S  P
Subjt:  RERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNH----SPYRRERERSSDHVRAPSHSP

P92965 Serine/arginine-rich splicing factor RS405.9e-11263.46Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ERG  +    GGGSR+SS++ RPSKT
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT

Query:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR
        LFVINFD  +TRTRDLEKHF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RRSPSPY+
Subjt:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR

Query:  RERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRER
        RERGSPDYG      + YR++R SPDYG RRSPSPY++ R RGSP+YGR R  N SP RRER  S       S SP ++RER +    PN   SP+++E 
Subjt:  RERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRER

Query:  GSPTDGRGSSYSP---RDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE
         SP +G G   SP   R+R RS P NG  +   +I        Y G +SP  +  + RSP A+E
Subjt:  GSPTDGRGSSYSP---RDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE

P92966 Serine/arginine-rich splicing factor RS415.5e-10261.25Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+GR GRRLRVEWTK +RG     G  GGSR+SS+  RPSKT
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT

Query:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR
        LFVINFD  +TRTRDLE+HF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYSP+R RDRSPDR+RRSPSPYR
Subjt:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR

Query:  RERGSPDYGNNGISRSPYRRQRASPDYG-SRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERAN-----DDRVPNRSCS
        RERGSPDYG  G S   ++R+R SPDYG  RRSPSPY+  R R SPDY R         RRER  S ++    + SP   R  +      + R  +RS  
Subjt:  RERGSPDYGNNGISRSPYRRQRASPDYG-SRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERAN-----DDRVPNRSCS

Query:  PY--RRERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE
        PY  RRE  SP          R R +S P NG  +    I E      Y G  SP  R   SRSP AEE
Subjt:  PY--RRERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE

Q3B7L6 Serine/arginine-rich splicing factor 66.2e-1327.45Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIR-------RPGGGGGGSRKSST
        M  ++ G   Y+ R+ D++R F  YG++  +D+K+G+ F+  ED RDA+DA+  L+ +E    G R+ VE  +  R  R       R GGGG  SR++S 
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIR-------RPGGGGGGSRKSST

Query:  NTR---PSKTLFVINFDPYHTRT--RDLEKHFDPYGKIL---SVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNR
          +   P +T F +  +   +R   +DL+      G++    + + R N   +++    D  RAL+  + +++  R I +    +     R  YS  R+R
Subjt:  NTR---PSKTLFVINFDPYHTRT--RDLEKHFDPYGKIL---SVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNR

Query:  DRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRG-----RSPNHSPYRRERERSSDHVRAPSHSPLHQR
         RS   +RRS S   R R S    +  IS+S  R +  S      RS     R + +  P   RG     RS +   Y + R RS    R+P  +     
Subjt:  DRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRG-----RSPNHSPYRRERERSSDHVRAPSHSPLHQR

Query:  ERANDDRVPNRSCSPYRRERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRD
        +  +  R  +RS SP       P+  R  S  P+   RS   +    R  + +  RD
Subjt:  ERANDDRVPNRSCSPYRRERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRD

Q9ZPX8 Serine/arginine-rich splicing factor RS31A6.0e-6449.34Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIR-RPGGGGGGSRKSSTNTRPSK
        M+ ++ GNF+YD R  DLERLF ++G+V RVDMKSG+AF+Y EDERDAEDAIR  D   FG   R+L VEW K  +G R +P  G     K+ +N RP+K
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIR-RPGGGGGGSRKSSTNTRPSK

Query:  TLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPY
        TLFVINFDP  TR RD+E+HF+PYGK+L+VR+RRNFAFVQ+  QEDAT+AL+ T+ SKL+D+V+SVEYA+R+  E+ + Y        +  R+RRSPSP 
Subjt:  TLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPY

Query:  RRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRE
         R R SPDY            +R SP+Y   + P+PY+R   R SPDYGR              RSSD+ RA + SP + R R           SP +R 
Subjt:  RRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRE

Query:  RG
        RG
Subjt:  RG

Arabidopsis top hitse value%identityAlignment
AT4G25500.1 arginine/serine-rich splicing factor 354.2e-11363.46Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ERG  +    GGGSR+SS++ RPSKT
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT

Query:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR
        LFVINFD  +TRTRDLEKHF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RRSPSPY+
Subjt:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR

Query:  RERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRER
        RERGSPDYG      + YR++R SPDYG RRSPSPY++ R RGSP+YGR R  N SP RRER  S       S SP ++RER +    PN   SP+++E 
Subjt:  RERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRER

Query:  GSPTDGRGSSYSP---RDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE
         SP +G G   SP   R+R RS P NG  +   +I        Y G +SP  +  + RSP A+E
Subjt:  GSPTDGRGSSYSP---RDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE

AT4G25500.3 arginine/serine-rich splicing factor 355.7e-9461.7Show/hide
Query:  GFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNF
        GFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ERG  +    GGGSR+SS++ RPSKTLFVINFD  +TRTRDLEKHF+PYGKI++VRIRRNF
Subjt:  GFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNF

Query:  AFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSP
        AF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG      + YR++R SPDYG RRSPSP
Subjt:  AFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSP

Query:  YQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRERGSPTDGRGSSYSP---RDRERSIPGNGHDQRLYTI
        Y++ R RGSP+YGR R  N SP RRER  S       S SP ++RER +    PN   SP+++E  SP +G G   SP   R+R RS P NG  +   +I
Subjt:  YQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRERGSPTDGRGSSYSP---RDRERSIPGNGHDQRLYTI

Query:  AEPRDSPSYGGTQSPKHRGYNSRSPQAEE
                Y G +SP  +  + RSP A+E
Subjt:  AEPRDSPSYGGTQSPKHRGYNSRSPQAEE

AT4G25500.4 arginine/serine-rich splicing factor 354.2e-11363.46Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ERG  +    GGGSR+SS++ RPSKT
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT

Query:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR
        LFVINFD  +TRTRDLEKHF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RRSPSPY+
Subjt:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR

Query:  RERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRER
        RERGSPDYG      + YR++R SPDYG RRSPSPY++ R RGSP+YGR R  N SP RRER  S       S SP ++RER +    PN   SP+++E 
Subjt:  RERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRER

Query:  GSPTDGRGSSYSP---RDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE
         SP +G G   SP   R+R RS P NG  +   +I        Y G +SP  +  + RSP A+E
Subjt:  GSPTDGRGSSYSP---RDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE

AT5G52040.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.9e-10361.25Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+GR GRRLRVEWTK +RG     G  GGSR+SS+  RPSKT
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT

Query:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR
        LFVINFD  +TRTRDLE+HF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYSP+R RDRSPDR+RRSPSPYR
Subjt:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR

Query:  RERGSPDYGNNGISRSPYRRQRASPDYG-SRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERAN-----DDRVPNRSCS
        RERGSPDYG  G S   ++R+R SPDYG  RRSPSPY+  R R SPDY R         RRER  S ++    + SP   R  +      + R  +RS  
Subjt:  RERGSPDYGNNGISRSPYRRQRASPDYG-SRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERAN-----DDRVPNRSCS

Query:  PY--RRERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE
        PY  RRE  SP          R R +S P NG  +    I E      Y G  SP  R   SRSP AEE
Subjt:  PY--RRERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE

AT5G52040.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.5e-10460.98Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+GR GRRLRVEWTK +RG     G  GGSR+SS+  RPSKT
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKT

Query:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR
        LFVINFD  +TRTRDLE+HF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYSP+R RDRSPDR+RRSPSPYR
Subjt:  LFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYR

Query:  RERGSPDYGNNGISRSPYRRQRASPDYG-SRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERAN-----DDRVPNRSCS
        RERGSPDYG  G S   ++R+R SPDYG  RRSPSPY+  R R SPDY R         RRER  S ++    + SP   R  +      + R  +RS  
Subjt:  RERGSPDYGNNGISRSPYRRQRASPDYG-SRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERAN-----DDRVPNRSCS

Query:  PY--RRERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE
        PY  RRE  SP          R R +S P NG  +    I E      Y G  SP      SRSP AEE
Subjt:  PY--RRERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCGATTTTTTGTGGAAACTTTGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTGGTCGATATGGAAAAGTGGATAGAGTAGATATGAAATCTGGTTT
TGCTTTTATCTACATGGAGGATGAGAGAGATGCTGAGGATGCTATCCGTGCACTGGATCGGAGAGAATTTGGCCGAAAGGGCCGTAGACTACGTGTTGAGTGGACTAAAC
AAGAGCGTGGCATTAGAAGACCAGGTGGAGGTGGTGGAGGTTCGAGGAAATCCTCTACTAATACAAGACCTTCAAAGACTTTATTTGTTATCAACTTTGACCCATATCAT
ACTAGGACAAGGGATTTGGAGAAGCACTTCGATCCTTATGGTAAGATATTGAGTGTAAGGATTCGAAGGAATTTTGCATTCGTCCAGTATGAATTGCAGGAGGATGCCAC
TAGAGCATTGGAGCTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCAGTGGAATATGCCGTTCGAGATGATGACGAGAAAAGAAATGGATATAGTCCAGATAGGA
ATCGTGATAGGTCTCCGGATAGAAAACGACGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTATGGCAACAATGGTATTAGCCGCAGTCCATATCGAAGA
CAAAGGGCTAGTCCTGATTATGGAAGTCGTCGTAGTCCAAGTCCTTATCAGAGAGACAGGGACAGGGGTTCTCCTGATTATGGCCGTGGTCGTAGCCCCAATCATAGTCC
TTATAGGAGGGAGAGAGAGAGATCAAGTGACCATGTTAGGGCCCCTAGCCATAGTCCTCTTCATCAGCGGGAAAGAGCTAATGATGACCGAGTCCCCAACCGAAGTTGCA
GTCCTTACCGGAGAGAGAGGGGGAGTCCTACTGATGGACGTGGCAGTAGCTATAGTCCTCGTGATAGAGAGAGATCAATCCCTGGCAATGGTCATGACCAACGACTATAT
ACAATAGCAGAACCTAGGGATAGCCCCAGTTATGGTGGGACTCAGAGCCCAAAGCATCGAGGATATAACAGCCGTTCGCCTCAAGCAGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
TTGAGATTATTCCAAATTATCTGTAAATTAAAATTAGGGTTAACAAAAAAAAAACCCTAAACGCCCCCATTTTTCCAGAGCTGCCCTCCCACGGTTCGCACCCGACTCTC
TGTCTCCCACTCGCAGCCTCTCCGGCGAATCCACACTGCGCCAATCGACCTCCGAAGGCGGCCTGAAACTCTCCACAGCGGAAAATTAATTGGACATAGAGTCGCCGACT
TGTTTGCAAAGGTAGTATGAAGCCGATTTTTTGTGGAAACTTTGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTGGTCGATATGGAAAAGTGGATAGAGTAG
ATATGAAATCTGGTTTTGCTTTTATCTACATGGAGGATGAGAGAGATGCTGAGGATGCTATCCGTGCACTGGATCGGAGAGAATTTGGCCGAAAGGGCCGTAGACTACGT
GTTGAGTGGACTAAACAAGAGCGTGGCATTAGAAGACCAGGTGGAGGTGGTGGAGGTTCGAGGAAATCCTCTACTAATACAAGACCTTCAAAGACTTTATTTGTTATCAA
CTTTGACCCATATCATACTAGGACAAGGGATTTGGAGAAGCACTTCGATCCTTATGGTAAGATATTGAGTGTAAGGATTCGAAGGAATTTTGCATTCGTCCAGTATGAAT
TGCAGGAGGATGCCACTAGAGCATTGGAGCTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCAGTGGAATATGCCGTTCGAGATGATGACGAGAAAAGAAATGGA
TATAGTCCAGATAGGAATCGTGATAGGTCTCCGGATAGAAAACGACGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTATGGCAACAATGGTATTAGCCG
CAGTCCATATCGAAGACAAAGGGCTAGTCCTGATTATGGAAGTCGTCGTAGTCCAAGTCCTTATCAGAGAGACAGGGACAGGGGTTCTCCTGATTATGGCCGTGGTCGTA
GCCCCAATCATAGTCCTTATAGGAGGGAGAGAGAGAGATCAAGTGACCATGTTAGGGCCCCTAGCCATAGTCCTCTTCATCAGCGGGAAAGAGCTAATGATGACCGAGTC
CCCAACCGAAGTTGCAGTCCTTACCGGAGAGAGAGGGGGAGTCCTACTGATGGACGTGGCAGTAGCTATAGTCCTCGTGATAGAGAGAGATCAATCCCTGGCAATGGTCA
TGACCAACGACTATATACAATAGCAGAACCTAGGGATAGCCCCAGTTATGGTGGGACTCAGAGCCCAAAGCATCGAGGATATAACAGCCGTTCGCCTCAAGCAGAGGAAT
GA
Protein sequenceShow/hide protein sequence
MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKTLFVINFDPYH
TRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRR
QRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRERGSPTDGRGSSYSPRDRERSIPGNGHDQRLY
TIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE