; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007010 (gene) of Snake gourd v1 genome

Gene IDTan0007010
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionELL-associated factor 1-like
Genome locationLG01:27100131..27100574
RNA-Seq ExpressionTan0007010
SyntenyTan0007010
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052985.1 hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa]3.6e-3265.12Show/hide
Query:  MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSFSSDDRTVGLRSFLEDKI-LVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQLRL
        MA+KKSP+  RLKK +IKLTA +RLCL  R+ S+RL SF SDDR VG+R  LED+  + +N   RKLERA SSS Y  +E+DVD+R++IFI+NFRRQLRL
Subjt:  MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSFSSDDRTVGLRSFLEDKI-LVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQLRL

Query:  ERQISLQLRYCRINSSETEYEERSPPCSS
        ERQISLQLRY R+NS ETEYE+ SPP  S
Subjt:  ERQISLQLRYCRINSSETEYEERSPPCSS

KAG6577759.1 hypothetical protein SDJN03_25333, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3264.06Show/hide
Query:  MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSFSSDDRTVGLRSFLEDKILVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQLRLE
        MA+  +P++ R+KK + KLTAF+RLC   R PSRR+RSF SD RT GLRS L D+ +V+ CSVRKLER  SS +  + EDDVD+R+QIFIDNFRRQL LE
Subjt:  MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSFSSDDRTVGLRSFLEDKILVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQLRLE

Query:  RQISLQLRYCRINSSETEYEERSPPCSS
        RQISL+L Y  INSSE +YE RSPP SS
Subjt:  RQISLQLRYCRINSSETEYEERSPPCSS

KAG6596691.1 hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4783.85Show/hide
Query:  MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSFSSDDRTVGLRSFLEDKILVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQLRLE
        MA KKSPLLFRLKK  IKLTAFLRLC+ARRQ SRRLRSF SDDRT GLRSFLED+ +V+N SVRKLERA SS+SYVNFEDDVDKRSQIFID F RQLRLE
Subjt:  MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSFSSDDRTVGLRSFLEDKILVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQLRLE

Query:  RQISLQLRYCRINSSETEYEERSPPCSSIR
        RQISLQLRYCR+NSSETE EE+SPP  SIR
Subjt:  RQISLQLRYCRINSSETEYEERSPPCSSIR

KAG7015798.1 hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-3364.84Show/hide
Query:  MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSFSSDDRTVGLRSFLEDKILVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQLRLE
        MA+  +P++ R+KK + KLTAF+RLC   R PSRR+RSF SD RT GLRS L D+ +V+ CSVRKLER  SS +  + EDDVD+R+QIFIDNFRRQL LE
Subjt:  MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSFSSDDRTVGLRSFLEDKILVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQLRLE

Query:  RQISLQLRYCRINSSETEYEERSPPCSS
        RQISL+LRY  INSSE +YE RSPP SS
Subjt:  RQISLQLRYCRINSSETEYEERSPPCSS

XP_022145292.1 uncharacterized protein LOC111014780 [Momordica charantia]1.5e-3873.72Show/hide
Query:  MADKKSPLLFRLKKPVIKLTAFLR----LCLARRQPSRRLRSFSSDDRTVGLRSFLEDKILVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQ
        MA+KKSPL+ RLKK V K+TA LR    LCLARR+PS RLRSFS  DRTVGLRSFLED+ + +NCS+R+LERA SS  Y N EDDVDKRSQIFIDNF R+
Subjt:  MADKKSPLLFRLKKPVIKLTAFLR----LCLARRQPSRRLRSFSSDDRTVGLRSFLEDKILVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQ

Query:  LRLERQISLQLRYCRINSSETEYEERS---PPCSSIR
        LRLERQISLQLRY RINSS TE EERS   PPCSSI+
Subjt:  LRLERQISLQLRYCRINSSETEYEERS---PPCSSIR

TrEMBL top hitse value%identityAlignment
A0A0A0L4Z8 Uncharacterized protein2.7e-3065.87Show/hide
Query:  MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSF-SSDDRTVGLRSFLEDKILVQNCS-VRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQLR
        MA+KKSP+  RL+K ++KL A LRLCL  RQ SRRL SF S DD+ VG+R  LED+  +   S VRKLERA SSS Y  +E+DVD+R++IFI+NFRRQLR
Subjt:  MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSF-SSDDRTVGLRSFLEDKILVQNCS-VRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQLR

Query:  LERQISLQLRYCRINSSETEYEERSP
        LERQISLQLRY R+NS ETEYE+RSP
Subjt:  LERQISLQLRYCRINSSETEYEERSP

A0A1R3J730 Uncharacterized protein1.8e-1346.83Show/hide
Query:  MADKKSPLLFRLKKPVIKLTAFLRL--------CLARRQPSRRLRSFSSDDRTVGLRSFLEDKILVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDN
        M  +   +L R KK V KL + L L        C  RR   R   + S +DR +GL SFLED+      SVR L+R     SY   +DDVDKR++IFI N
Subjt:  MADKKSPLLFRLKKPVIKLTAFLRL--------CLARRQPSRRLRSFSSDDRTVGLRSFLEDKILVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDN

Query:  FRRQLRLERQISLQLRYCRINSSETE
        FRRQL LERQ+SL+LRYCR  S +T+
Subjt:  FRRQLRLERQISLQLRYCRINSSETE

A0A5D3CHZ5 Uncharacterized protein1.7e-3265.12Show/hide
Query:  MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSFSSDDRTVGLRSFLEDKI-LVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQLRL
        MA+KKSP+  RLKK +IKLTA +RLCL  R+ S+RL SF SDDR VG+R  LED+  + +N   RKLERA SSS Y  +E+DVD+R++IFI+NFRRQLRL
Subjt:  MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSFSSDDRTVGLRSFLEDKI-LVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQLRL

Query:  ERQISLQLRYCRINSSETEYEERSPPCSS
        ERQISLQLRY R+NS ETEYE+ SPP  S
Subjt:  ERQISLQLRYCRINSSETEYEERSPPCSS

A0A6J1CVX6 ELL-associated factor 1-like4.3e-1548.63Show/hide
Query:  MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSFSSDDRTVGLRSFLEDKIL---------VQNCSVRKLE----RASSSSSYVNFEDDVDKRSQ
        M +KK   LFRLKK + K T  LRL LARR PS RLRS +  DRTV  R     + L           +  + + +    R   + SY   EDDVD+R+Q
Subjt:  MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSFSSDDRTVGLRSFLEDKIL---------VQNCSVRKLE----RASSSSSYVNFEDDVDKRSQ

Query:  IFIDNFRRQLRLERQISLQLR-YCRINSSETEYEERSPPC--SSIR
         FID+FR +L LERQIS QLR Y R +SSETEYE+ SPP   SSIR
Subjt:  IFIDNFRRQLRLERQISLQLR-YCRINSSETEYEERSPPC--SSIR

A0A6J1CW64 uncharacterized protein LOC1110147807.2e-3973.72Show/hide
Query:  MADKKSPLLFRLKKPVIKLTAFLR----LCLARRQPSRRLRSFSSDDRTVGLRSFLEDKILVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQ
        MA+KKSPL+ RLKK V K+TA LR    LCLARR+PS RLRSFS  DRTVGLRSFLED+ + +NCS+R+LERA SS  Y N EDDVDKRSQIFIDNF R+
Subjt:  MADKKSPLLFRLKKPVIKLTAFLR----LCLARRQPSRRLRSFSSDDRTVGLRSFLEDKILVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQ

Query:  LRLERQISLQLRYCRINSSETEYEERS---PPCSSIR
        LRLERQISLQLRY RINSS TE EERS   PPCSSI+
Subjt:  LRLERQISLQLRYCRINSSETEYEERS---PPCSSIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57510.1 unknown protein2.1e-0650Show/hide
Query:  EDDVDKRSQIFIDNFRRQLRLERQISLQLRYCRINSSETEYEERSP
        ++D+D ++++FI NF RQL++ERQISL+L+YC+ N+    Y  RSP
Subjt:  EDDVDKRSQIFIDNFRRQLRLERQISLQLRYCRINSSETEYEERSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACAAGAAATCGCCATTGCTATTCCGCCTGAAGAAGCCAGTGATAAAACTCACTGCATTCCTCCGCCTCTGCCTCGCTCGCCGCCAACCTTCTCGACGGCTGCG
ATCATTCAGTTCCGACGATCGGACGGTAGGGCTACGGAGTTTCTTGGAAGACAAGATACTTGTTCAGAATTGTTCTGTGAGAAAGCTTGAACGTGCTTCATCGAGTTCAA
GCTATGTAAATTTCGAAGACGATGTCGATAAGCGATCTCAGATCTTCATCGATAATTTTCGGCGTCAATTGAGGTTAGAAAGACAAATTTCTTTGCAATTGAGGTACTGT
AGAATTAATAGCTCTGAAACGGAGTATGAAGAGAGATCGCCGCCGTGTTCGTCGATTCGATGA
mRNA sequenceShow/hide mRNA sequence
TCCAAAATAGAGAAAAAATGGCAGACAAGAAATCGCCATTGCTATTCCGCCTGAAGAAGCCAGTGATAAAACTCACTGCATTCCTCCGCCTCTGCCTCGCTCGCCGCCAA
CCTTCTCGACGGCTGCGATCATTCAGTTCCGACGATCGGACGGTAGGGCTACGGAGTTTCTTGGAAGACAAGATACTTGTTCAGAATTGTTCTGTGAGAAAGCTTGAACG
TGCTTCATCGAGTTCAAGCTATGTAAATTTCGAAGACGATGTCGATAAGCGATCTCAGATCTTCATCGATAATTTTCGGCGTCAATTGAGGTTAGAAAGACAAATTTCTT
TGCAATTGAGGTACTGTAGAATTAATAGCTCTGAAACGGAGTATGAAGAGAGATCGCCGCCGTGTTCGTCGATTCGATGAACAAAATTATTTTAGAAATCGAAGTGAATT
GCTG
Protein sequenceShow/hide protein sequence
MADKKSPLLFRLKKPVIKLTAFLRLCLARRQPSRRLRSFSSDDRTVGLRSFLEDKILVQNCSVRKLERASSSSSYVNFEDDVDKRSQIFIDNFRRQLRLERQISLQLRYC
RINSSETEYEERSPPCSSIR