; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007039 (gene) of Snake gourd v1 genome

Gene IDTan0007039
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionexosome complex component RRP43
Genome locationLG03:52269171..52278108
RNA-Seq ExpressionTan0007039
SyntenyTan0007039
Gene Ontology termsGO:0071042 - nuclear polyadenylation-dependent mRNA catabolic process (biological process)
GO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0034427 - nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (biological process)
GO:0034473 - U1 snRNA 3'-end processing (biological process)
GO:0034475 - U4 snRNA 3'-end processing (biological process)
GO:0034476 - U5 snRNA 3'-end processing (biological process)
GO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0071028 - nuclear mRNA surveillance (biological process)
GO:0071035 - nuclear polyadenylation-dependent rRNA catabolic process (biological process)
GO:0071038 - nuclear polyadenylation-dependent tRNA catabolic process (biological process)
GO:0000177 - cytoplasmic exosome (RNase complex) (cellular component)
GO:0000176 - nuclear exosome (RNase complex) (cellular component)
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR015847 - Exoribonuclease, phosphorolytic domain 2
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033523.1 Exosome complex component RRP43 [Cucurbita argyrosperma subsp. argyrosperma]8.9e-15997.36Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIES DEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTIS SGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKE VNKE+RKLKLN +PFSLTCLLH+NYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
Subjt:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEI
        MEI
Subjt:  MEI

XP_008460772.1 PREDICTED: exosome complex component RRP43 isoform X1 [Cucumis melo]2.2e-15795.38Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPS+ES DEGCIA+DFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PP+CSPIVRPGRPAEAAPVISKQLSDTIS SGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKEPVNKEKRKLKLN +PFSLTCLLH+ YILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDC+ALTRQRSKELQ+ILDEAISG
Subjt:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEI
        MEI
Subjt:  MEI

XP_022928740.1 exosome complex component RRP43 [Cucurbita moschata]1.5e-15897.36Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIES DEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTIS SGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIP VALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKE VNKEKRKLKLN +PFSLTCLLH+NYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
Subjt:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEI
        MEI
Subjt:  MEI

XP_022967860.1 exosome complex component RRP43 [Cucurbita maxima]9.8e-15897.03Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIES DEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        P ICSPIVRPGRPAEAAPVISKQLSDTIS SGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEE+GG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKE VNKEKRKLKLN +PFSLTCLLH+NYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
Subjt:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEI
        MEI
Subjt:  MEI

XP_023544252.1 exosome complex component RRP43 [Cucurbita pepo subsp. pepo]4.0e-15997.69Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIES DEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTIS SGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKE VNKEKRKLKLN +PFSLTCLLH+NYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
Subjt:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEI
        MEI
Subjt:  MEI

TrEMBL top hitse value%identityAlignment
A0A1S3CD66 exosome complex component RRP43 isoform X11.1e-15795.38Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPS+ES DEGCIA+DFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PP+CSPIVRPGRPAEAAPVISKQLSDTIS SGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKEPVNKEKRKLKLN +PFSLTCLLH+ YILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDC+ALTRQRSKELQ+ILDEAISG
Subjt:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEI
        MEI
Subjt:  MEI

A0A1S3CEE1 exosome complex component RRP43 isoform X21.1e-15795.38Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPS+ES DEGCIA+DFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PP+CSPIVRPGRPAEAAPVISKQLSDTIS SGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKEPVNKEKRKLKLN +PFSLTCLLH+ YILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDC+ALTRQRSKELQ+ILDEAISG
Subjt:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEI
        MEI
Subjt:  MEI

A0A6J1DFM7 exosome complex component RRP439.9e-15694.72Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFP+QF+ERH AESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIES DEGCIA+DFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTIS SGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKEPVNKEKRKLKL+ IPFSLTC+LH+N+ILADPTAEEES+METIVTVVLD SGQLVSFYKPGGSVLA+TSAVQDCVALTRQR KELQ+ILDEAISG
Subjt:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEI
        MEI
Subjt:  MEI

A0A6J1ESF5 exosome complex component RRP437.3e-15997.36Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIES DEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSPIVRPGRPAEAAPVISKQLSDTIS SGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIP VALNDDGKVVFVSEEEGG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKE VNKEKRKLKLN +PFSLTCLLH+NYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
Subjt:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEI
        MEI
Subjt:  MEI

A0A6J1HVL5 exosome complex component RRP434.7e-15897.03Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIES DEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        P ICSPIVRPGRPAEAAPVISKQLSDTIS SGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEE+GG
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
        ENFEKE VNKEKRKLKLN +PFSLTCLLH+NYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG
Subjt:  ENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG

Query:  MEI
        MEI
Subjt:  MEI

SwissProt top hitse value%identityAlignment
Q10205 Exosome complex component rrp436.6e-3230.34Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+++ P Q+    L + +R DGR++ + R+  I    +S+ANGSA+ + G    +  IK E+  P   S +EG I  +  + P+CS   +PG P++ A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC
        +S++L  T+  S +I+L+ L + + KAAW+ Y DI CL+ DGS FD A  +  AA   +++P    ++D + V  +             +   R ++L+ 
Subjt:  ISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC

Query:  IPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQR
           S +  + ++ +LADPT EEE +    +T++L+SS  +V   K GG+ +     ++ C+ + R +
Subjt:  IPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQR

Q2KHU3 Exosome complex component RRP431.7e-4333.8Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G + +A+GSAL K+G+TT++  IK E   P  ++ D+G +  +  + P+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC
         S+ ++D I  S +I   +L +  GK AW+ Y D+ CL+ DG++ DA   +  AA  ++Q+P V +N++  +  V+              K+K  L +  
Subjt:  ISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC

Query:  IPFSLT-CLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME
         P + +  +  +  ++ DPT EEE +    +TVV+D  G+L   +KPGGS L   + +QDC++    R KE++ ++DE    M+
Subjt:  IPFSLT-CLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME

Q8TYC2 Exosome complex component Rrp423.3e-3132.16Show/hide
Query:  RPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLR
        R DGR   + R   +  G +S ANGSAL ++G+T ++  +K+EV  P  +S +EG +AV+  + P+  P   PG P E A  +S+ +   I  S MIDL 
Subjt:  RPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLR

Query:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADP
        EL + +G+  W+ ++DI+ LD DG+LFDA+++ + +A S  ++P   + DD               E E + ++   L +N  P S+T      Y+L DP
Subjt:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADP

Query:  TAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTS-AVQDCVALTRQRSKELQ
          EEE +M+T +TV +  SG++ +  K  G +  +    ++D + L  ++++E++
Subjt:  TAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTS-AVQDCVALTRQRSKELQ

Q96B26 Exosome complex component RRP432.8e-4634.51Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K E   PS ++ D+G +  +  +PP+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC
         S+ ++D I  S +I   +L +  GK  W+ Y D+ CLD DG++ DA   +  AA  ++Q+P V +N++  +  V+              K+K  L +  
Subjt:  ISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC

Query:  IPFSLT-CLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME
         P + +  +  +  ++ DPT EEE +    +T+V+D  G+L   +KPGGS L   + +QDC++    R KE++ ++DE I  M+
Subjt:  IPFSLT-CLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME

Q9D753 Exosome complex component RRP438.0e-4634.98Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K E   P +++ D G +  +  +PP+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC
         S+ ++D +  S +I   +L +  GK AW+ Y D+ CLD DG++ DA   +  AA  ++Q+P V +N++  +  V+              K+K  L +  
Subjt:  ISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNC

Query:  IPFSLT-CLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGM
         P + +  +  +  ++ DPT EEE +    +TVV D  G+L   +KPGGS L   + +QDC++    R KE+  +LDE I  M
Subjt:  IPFSLT-CLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGM

Arabidopsis top hitse value%identityAlignment
AT1G60080.1 3'-5'-exoribonuclease family protein4.9e-12374.58Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM
        MG+P+AA  DLS+EMEVDAFRR+FP++FFERHL+ES+RPDGR LGKARDT + LG VS+A+GSALAKIGSTTMLAAI+MEVMTPS +S DEGCIA++FHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
        PPICSP VRPGRPAEAAPVISK+LSDTI  SGMIDL+EL LV GKAAWM YLDIYCLDADG+LFDAALL+A AAFS+LQIP+VALND+G++V V+ E+  
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG

Query:  EN---FEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDE
        +N    EKE VNKEKRKL L  IPFSLTC+LH+NYILADPT EEES+M+T+VTVVLDSS Q+VSFYK GG+ LAY+SA++ CV L R+R+KEL+ IL E
Subjt:  EN---FEKEPVNKEKRKLKLNCIPFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDE

AT3G07750.1 3'-5'-exoribonuclease family protein1.4e-2129.29Show/hide
Query:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ
        F +  +A+ +R DGR     R   +  G +  ANGSA  +IG T ++A++K E+  PS    D+G +AV     P   P    R G    +E A  + + 
Subjt:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ

Query:  LSDTISGSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPF
        L    SG+G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA ++  IP        KV   +E    E  E +  ++E  +   + +P 
Subjt:  LSDTISGSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPF

Query:  SLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME
         +T      + + D TAEEES M + V++ ++ +G +    K  GS L   S + D +++ +  ++ L   LD  IS  E
Subjt:  SLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME

AT3G07750.2 3'-5'-exoribonuclease family protein1.4e-2129.29Show/hide
Query:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ
        F +  +A+ +R DGR     R   +  G +  ANGSA  +IG T ++A++K E+  PS    D+G +AV     P   P    R G    +E A  + + 
Subjt:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ

Query:  LSDTISGSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPF
        L    SG+G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA ++  IP        KV   +E    E  E +  ++E  +   + +P 
Subjt:  LSDTISGSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPF

Query:  SLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME
         +T      + + D TAEEES M + V++ ++ +G +    K  GS L   S + D +++ +  ++ L   LD  IS  E
Subjt:  SLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTGCCAAATGCTGCTTCTGGCGATTTGTCGTCGGAAATGGAGGTTGATGCTTTTAGACGACTCTTTCCAATTCAGTTTTTTGAGCGTCATCTCGCTGAATCGAT
ACGTCCTGACGGAAGAGCACTGGGAAAAGCTAGGGATACAACCATTGCTCTTGGACCGGTATCATCTGCGAATGGGTCAGCCCTGGCTAAGATCGGTTCTACGACGATGT
TGGCTGCTATTAAAATGGAAGTAATGACGCCCTCCATAGAGTCACTGGATGAGGGTTGCATAGCTGTTGATTTCCATATGCCTCCAATATGCTCTCCCATTGTTAGGCCT
GGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGCTATCTGACACTATTTCAGGTTCTGGGATGATTGATCTGAGAGAATTATCTCTAGTTAAAGGAAAAGCTGC
TTGGATGGCATACTTGGATATTTATTGCTTGGATGCTGACGGATCTCTTTTCGATGCTGCACTTCTTTCTGCCGCTGCTGCATTTTCTCACTTGCAAATTCCTGTTGTTG
CTCTAAATGATGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAACTTTGAGAAGGAACCTGTCAATAAAGAAAAAAGGAAACTGAAATTGAACTGTATT
CCTTTCTCATTAACATGCCTACTCCACGAGAACTACATCTTGGCTGATCCTACGGCAGAGGAGGAGTCTGTCATGGAAACTATTGTAACCGTGGTTTTGGATTCATCTGG
TCAATTAGTGTCCTTCTATAAGCCGGGTGGATCTGTTCTTGCCTATACATCAGCTGTTCAGGATTGTGTTGCATTGACAAGACAAAGATCGAAAGAACTACAGATGATTT
TAGATGAAGCGATTTCTGGTATGGAAATTGGGTAA
mRNA sequenceShow/hide mRNA sequence
CTTTTCCTCGGCAATTTATCGATTTCGTTCCTTTCCAATTTCTATTGAACTCTTTCTGCAGCACCAAAATTTGCTCGCTTCCTCAATTTTCATGCCTCCTCCACCTCCTC
AACGGCCGTCGCATTCATCTCCTTCATAATCGTTGCCAATCGCTGCCGAAGGGCACCGCAACTGAAGCCCGCCGCTGGGGTTTTGACCGGAGAAAAGATAAGACAAAGAA
GTGTAGAATTTATATACACACTACACATTGGACCCTGTGGTTCATTGTTCGAGAGAGAGAAGGAAATATCTAGTGCACAAAACTCGCTGGTAAAAACAGATAAGAGTACG
AACAATGGGACTGCCAAATGCTGCTTCTGGCGATTTGTCGTCGGAAATGGAGGTTGATGCTTTTAGACGACTCTTTCCAATTCAGTTTTTTGAGCGTCATCTCGCTGAAT
CGATACGTCCTGACGGAAGAGCACTGGGAAAAGCTAGGGATACAACCATTGCTCTTGGACCGGTATCATCTGCGAATGGGTCAGCCCTGGCTAAGATCGGTTCTACGACG
ATGTTGGCTGCTATTAAAATGGAAGTAATGACGCCCTCCATAGAGTCACTGGATGAGGGTTGCATAGCTGTTGATTTCCATATGCCTCCAATATGCTCTCCCATTGTTAG
GCCTGGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGCTATCTGACACTATTTCAGGTTCTGGGATGATTGATCTGAGAGAATTATCTCTAGTTAAAGGAAAAG
CTGCTTGGATGGCATACTTGGATATTTATTGCTTGGATGCTGACGGATCTCTTTTCGATGCTGCACTTCTTTCTGCCGCTGCTGCATTTTCTCACTTGCAAATTCCTGTT
GTTGCTCTAAATGATGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAACTTTGAGAAGGAACCTGTCAATAAAGAAAAAAGGAAACTGAAATTGAACTG
TATTCCTTTCTCATTAACATGCCTACTCCACGAGAACTACATCTTGGCTGATCCTACGGCAGAGGAGGAGTCTGTCATGGAAACTATTGTAACCGTGGTTTTGGATTCAT
CTGGTCAATTAGTGTCCTTCTATAAGCCGGGTGGATCTGTTCTTGCCTATACATCAGCTGTTCAGGATTGTGTTGCATTGACAAGACAAAGATCGAAAGAACTACAGATG
ATTTTAGATGAAGCGATTTCTGGTATGGAAATTGGGTAAGTTTTGGGGAGGTTTGCCTTCTATCTTTTCTTCTGGGTTTTAATGAATGAAATGGTGGGGTGGTTTGTAGG
CTTCCAATTATACTTGATTGGTTGCCTCCAGATTTTGTTGATGATATTTGTTTTCCTTAGAATTTGGTATCAGTAATCGATTTTGATTTCTACATTACAGTTCTAAGCAA
ATATCTCTTTATTACTAATTCAAGTTCATTTCTCACTTGTTTTCATCAACTTGATAACATTGGAGCCTGACTGATATATGGTGCATGTGGAGGTTTTATCTTTA
Protein sequenceShow/hide protein sequence
MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESLDEGCIAVDFHMPPICSPIVRP
GRPAEAAPVISKQLSDTISGSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCI
PFSLTCLLHENYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISGMEIG