; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007047 (gene) of Snake gourd v1 genome

Gene IDTan0007047
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L44
Genome locationLG04:82268844..82271392
RNA-Seq ExpressionTan0007047
SyntenyTan0007047
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006646 - phosphatidylethanolamine biosynthetic process (biological process)
GO:0016540 - protein autoprocessing (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004497 - monooxygenase activity (molecular function)
GO:0004609 - phosphatidylserine decarboxylase activity (molecular function)
GO:0005506 - iron ion binding (molecular function)
GO:0005509 - calcium ion binding (molecular function)
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR000552 - Ribosomal protein L44e
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KCW65063.1 hypothetical protein EUGRSUZ_G02575 [Eucalyptus grandis]2.3e-4198.86Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVR
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKV+
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVR

KJB31844.1 hypothetical protein B456_005G210700 [Gossypium raimondii]2.3e-4193.62Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVRMQSISL
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKV   ++ L
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVRMQSISL

KJB76838.1 hypothetical protein B456_012G133600 [Gossypium raimondii]2.3e-4198.86Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVR
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKV+
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVR

KJB79862.1 hypothetical protein B456_013G070100 [Gossypium raimondii]2.3e-4198.86Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVR
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKV+
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVR

MBA0637225.1 hypothetical protein [Gossypium davidsonii]4.0e-41100Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKV
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKV
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKV

TrEMBL top hitse value%identityAlignment
A0A059BG29 Uncharacterized protein1.1e-4198.86Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVR
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKV+
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVR

A0A0D2RJ15 Uncharacterized protein1.1e-4193.62Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVRMQSISL
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKV   ++ L
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVRMQSISL

A0A0D2S9Q7 Uncharacterized protein1.1e-4198.86Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVR
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKV+
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVR

A0A0D2TMG0 Uncharacterized protein1.1e-4198.86Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVR
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKV+
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVR

A0A0D2U3F8 Uncharacterized protein1.1e-4198.86Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVR
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKV+
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVR

SwissProt top hitse value%identityAlignment
O23290 60S ribosomal protein L36a4.6e-4091.86Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        MVN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIK
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

O59870 60S ribosomal protein L442.4e-3379.07Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        MVNVPKT++TYCK K C+KHT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK+  Q  +K
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

P0CQ50 60S ribosomal protein L441.9e-3380.23Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        MVN+PKT++TYCK K CRKHT HKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK   Q  +K
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

P0CQ51 60S ribosomal protein L441.9e-3380.23Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        MVN+PKT++TYCK K CRKHT HKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK   Q  +K
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

Q96499 60S ribosomal protein L441.2e-43100Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

Arabidopsis top hitse value%identityAlignment
AT3G23390.1 Zinc-binding ribosomal protein family protein3.3e-4191.86Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        MVN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIK
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

AT4G14320.1 Zinc-binding ribosomal protein family protein3.3e-4191.86Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        MVN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIK
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

AT4G14320.2 Zinc-binding ribosomal protein family protein3.3e-4191.86Show/hide
Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        MVN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIK
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAACGTTCCCAAGACGAAGAAGACTTACTGCAAGAGCAAGGAGTGCAGGAAGCACACCTTGCACAAGGTTACACAATACAAGAAGGGTAAGGATAGTCTTGCAGC
ACAAGGAAAGCGTCGGTACGATCGTAAACAATCAGGATATGGAGGTCAGACCAAGCCCGTCTTTCACAAGAAGGCCAAAACCACCAAGAAGATTGTGTTGAGGCTTCAAT
GCCAAGGATGCAAACACGTTTCCCAGCACCCTATCAAGGTTAGAATGCAAAGCATTTCATTATTTTCTGTTTATGTCCTCTATGTATTCAGTATCTTGTTAATTGCACTT
GTCCGGACAATCTTGCATATAGTGGTTCTCATACTACATGTTTAA
mRNA sequenceShow/hide mRNA sequence
TCTCGTTTCGTCTTCAATTCTTACTTTCCCATCAATTAGGGTTTCTCGGGCAGGTCTCGTCGACGTCCAGCCGCCATGGTTAACGTTCCCAAGACGAAGAAGACTTACTG
CAAGAGCAAGGAGTGCAGGAAGCACACCTTGCACAAGGTTACACAATACAAGAAGGGTAAGGATAGTCTTGCAGCACAAGGAAAGCGTCGGTACGATCGTAAACAATCAG
GATATGGAGGTCAGACCAAGCCCGTCTTTCACAAGAAGGCCAAAACCACCAAGAAGATTGTGTTGAGGCTTCAATGCCAAGGATGCAAACACGTTTCCCAGCACCCTATC
AAGGTTAGAATGCAAAGCATTTCATTATTTTCTGTTTATGTCCTCTATGTATTCAGTATCTTGTTAATTGCACTTGTCCGGACAATCTTGCATATAGTGGTTCTCATACT
ACATGTTTAAGGCTGTTGTCTCTTGGGTCCAAAAAGCGTTACATCCATTTTACCCCGTTAAAATAAACACCCTTGTGACTGCTATACTGGTGAAGGCAGTTGATGCTAGC
TCTTCTGAATGCCTTTGCCATTGGTGTAGTTTTCTTTCCTTCATTCCCGATCAAAATATTCTCTCTCGGGGTTTTAAAATCTGAGATGCAAGCACTTCGAAATTGGTGGA
GACAAGAAGGGGAAGGGAACTTCTCTTTTCTAGACCTGTTGTCAGTTCTTTTCTTTTGTCATTTCTTTTTTACAAGATCATTTGGTATCTCGGAGATTTTGCAGCTTTAC
TCTGTTTCGTTCAGCAATTAGTTCTACATGTCCTAACGATACTATTTAGCTGAAACTCTCTTCTTAATTATCAAATTTCCAAATTTTTATGCTCTTTGTTGAATGTGTTG
AGTCGTTAAATTATGTTGTTGTTGGCATGTCTGGAGGTCGTAGGTTTGAATCTCTCTACTTCCTAAATGTTGTTTAACTAAAAAAGAATCAATTATTATTTACCAAATTA
ATTGATAGATTATTATTAGATTTGTGAAATTTTATGTTTTCTCTTCATGAAGTTAAAAGAAAATTTTCTGTTATTCAGAAAAAAAAATTATATCTTAAAATTATTTCACT
AATATCAAAGATAAAATATATATTTTGGAATCAAGGTTATTGTATTCTTTCTAAAGTTTAGCTTAGAATCATTTGATAGCCAATCTGGGGATGGCTTGAAGTGTTCATGT
CTGGTTTAAAATATAAGTATAATATGAATTAAGGATAGATAACCGTTGGGGTTTTGAAAATTAAGTCTAGAAATACTATTTTTACCTAAGGATTTTCTTCTTTGTTATCT
ATATTTTACCTATGTTTTTAAAAACCAAGCCATAATTTGACAACTAAAAAAAAGTAGTTTTTAAAAACTTGTTCTTGTTATTGGAATTTAGTTAAGAATTTAAAGCCTTT
TTAAAGGAGATAAAATTCATTGCATAGAAAGTGAGAGAAAATAAGCATAATTTTAAAAAATTCAAAACTAAAACTTAA
Protein sequenceShow/hide protein sequence
MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKVRMQSISLFSVYVLYVFSILLIAL
VRTILHIVVLILHV