; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007073 (gene) of Snake gourd v1 genome

Gene IDTan0007073
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPre-mRNA-splicing factor SYF2
Genome locationLG05:10077459..10079351
RNA-Seq ExpressionTan0007073
SyntenyTan0007073
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0000974 - Prp19 complex (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0071014 - post-mRNA release spliceosomal complex (cellular component)
InterPro domainsIPR013260 - mRNA splicing factor SYF2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010847.1 Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]9.5e-16494.29Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQN PVP SSE VQAGRSSGSSNFV PDEYEDL DEKP+EEG SDGD DKFSG +NVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELK+REEKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_011649295.1 pre-mRNA-splicing factor syf2 [Cucumis sativus]1.9e-16493.65Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCF++IAE+KAR+Q+N PVP SSE VQAGRSSGSS+FV PDEYEDLHDEKPDEEG SDGD+DKFSGE+NVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAE+KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_022943827.1 pre-mRNA-splicing factor syf2-like [Cucurbita moschata]9.5e-16494.29Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQN PVP SSE VQAGRSSGSSNFV PDEYEDL DEKP+EEG SDGD DKFSG +NVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELK+REEKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_022986094.1 pre-mRNA-splicing factor syf2-like [Cucurbita maxima]2.1e-16393.97Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQN PVP SSE VQAGRSSGSSNFV PDEYEDL DEKP+EEG SDGD DKFSG +NVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+REEKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_023513083.1 pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo]2.8e-16393.97Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKA+NQQN PVP SSE VQAGRSSGSSNFV PDEYEDL DEKP+EEG SDGD DKFSG +NVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELK+REEKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

TrEMBL top hitse value%identityAlignment
A0A0A0LJ81 Pre-mRNA-splicing factor SYF29.2e-16593.65Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCF++IAE+KAR+Q+N PVP SSE VQAGRSSGSS+FV PDEYEDLHDEKPDEEG SDGD+DKFSGE+NVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAE+KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A1S3C6T5 Pre-mRNA-splicing factor SYF28.6e-16392.38Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCF++IA++KAR+Q+N PVP SSE VQAGRSSGSS+FV PDEYEDLHDEKPDEEG SDGD+DKFSGE+ VEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM K+YMLDTQEAAE+KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKI+NMVKELK+R+EKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A5A7TRR3 Pre-mRNA-splicing factor SYF28.6e-16392.38Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCF++IA++KAR+Q+N PVP SSE VQAGRSSGSS+FV PDEYEDLHDEKPDEEG SDGD+DKFSGE+ VEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM K+YMLDTQEAAE+KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKI+NMVKELK+R+EKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1FXE9 Pre-mRNA-splicing factor SYF24.6e-16494.29Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQN PVP SSE VQAGRSSGSSNFV PDEYEDL DEKP+EEG SDGD DKFSG +NVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELK+REEKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1JD37 Pre-mRNA-splicing factor SYF21.0e-16393.97Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQN PVP SSE VQAGRSSGSSNFV PDEYEDL DEKP+EEG SDGD DKFSG +NVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+REEKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

SwissProt top hitse value%identityAlignment
Q28G05 Pre-mRNA-splicing factor syf29.6e-2639.27Show/hide
Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLD--TQEAAESKYKKWEKDPAPYGWD
        K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   ANG+D ++A +L+   ++A   + KK  K+P   G+ 
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLD--TQEAAESKYKKWEKDPAPYGWD

Query:  VFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIER
         +    L   Y++ TK +  D+EEY   K+   E +   S   Y      S+  ID MV +L+++ EKR  +SRRR +++D DID IN+RN  FNKK ER
Subjt:  VFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIER

Query:  AFGRYTLEIKNNLERGTAL
         +G+YT EIK NLERGTA+
Subjt:  AFGRYTLEIKNNLERGTAL

Q4QRB2 Pre-mRNA-splicing factor SYF29.0e-2439.07Show/hide
Query:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK
        R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A G D +K  +L+ + E AE   ++ +K     G+  +   
Subjt:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK

Query:  TLYNAYKKRTKNVNVDLEEYNKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y + TK +  D+E Y + +E   E F+  ++SL +G     SE+ ID MV +L+++ EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYNAYKKRTKNVNVDLEEYNKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Q6DV01 Pre-mRNA-splicing factor syf26.9e-2438.14Show/hide
Query:  KKLFELRLKMNEARKANQTAIAAEKKKMEPPSE-SRGISKQKW---LEDRKKKIGKLLDANGLDMKKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK
        +K  EL LK NEARK N   +  E K+++ P+      S+ +W   +E++KK+      A G D ++  +L+ + E AE   +K +K     G+  +   
Subjt:  KKLFELRLKMNEARKANQTAIAAEKKKMEPPSE-SRGISKQKW---LEDRKKKIGKLLDANGLDMKKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK

Query:  TLYNAYKKRTKNVNVDLEEYNKMK-ESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         +   Y++ T+ +  DLE+Y K++ ES  EFY  ++SL +G      E  +D MV++L+++ +KR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYNAYKKRTKNVNVDLEEYNKMK-ESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Q8AVQ6 Pre-mRNA-splicing factor syf23.3e-2639.73Show/hide
Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLD--TQEAAESKYKKWEKDPAPYGWD
        K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   ANG+D ++A +L+   ++A   + KK  K+P   G+ 
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLD--TQEAAESKYKKWEKDPAPYGWD

Query:  VFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIER
         +    L   Y++ TK +  D+EEY   KE   E +   S   Y      S+  ID MV +L+++ EKR  +SRRR +++D DID IN+RN  FNKK ER
Subjt:  VFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIER

Query:  AFGRYTLEIKNNLERGTAL
         +G+YT EIK NLERGTA+
Subjt:  AFGRYTLEIKNNLERGTAL

Q9D198 Pre-mRNA-splicing factor SYF29.0e-2439.07Show/hide
Query:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK
        R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A G D +K  +L+ + E AE   ++ +K     G+  +   
Subjt:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK

Query:  TLYNAYKKRTKNVNVDLEEYNKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y + TK +  D+E Y + +E   E F+  ++SL +G     SE+ ID MV +L+++ EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYNAYKKRTKNVNVDLEEYNKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Arabidopsis top hitse value%identityAlignment
AT2G16860.1 GCIP-interacting family protein6.6e-11569.52Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL
        M  E RVHPDC NASNPYHEC EYCF+ IAE KAR ++              +++G +  V     E L D++ +E+   + + ++ + E  V  D T+L
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGR+KKLFELRLKMNEARK+NQT + +EKKKME P+E++GISKQKWLE RKKKIGKLLDANGLDM +AYMLDTQEAAESKYKKWEK+P P GWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYNAYKKRTKN+ VDLEEYN+M+ +DPEFYREASSLQYGKAPK S+DKID M KEL +RE+KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+YT
Subjt:  LYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGATGAAGGAAGAGTACATCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAGAATAATAGCTGAAGTCAAAGCCCGGAATCA
GCAAAATGGGCCAGTTCCCATTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGGTTCCTCCAATTTTGTGGCTCCAGATGAGTATGAAGATCTTCATGACGAAAAGC
CCGACGAAGAAGGGCAAAGTGACGGTGATATTGACAAATTTAGTGGTGAGGATAATGTGGAAGGAGACTTCACAAAACTCACAGGGAGGAAAAAGAAATTGTTTGAACTT
AGGCTTAAGATGAATGAGGCACGGAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAGATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCT
TGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGAAAAAAGCGTATATGTTGGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAGT
GGGAGAAGGATCCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACATTGTACAATGCATACAAAAAGCGGACAAAGAATGTAAATGTTGACCTCGAGGAATACAAT
AAAATGAAAGAATCTGATCCTGAGTTCTATCGTGAGGCTTCAAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAA
GGAGCGGGAGGAGAAGAGAAGGTCATTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCTATCAATGATCGTAATGAGCATTTCAACAAAAAGATTGAGC
GGGCCTTTGGCCGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGATGAAGGAAGAGTACATCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAGAATAATAGCTGAAGTCAAAGCCCGGAATCA
GCAAAATGGGCCAGTTCCCATTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGGTTCCTCCAATTTTGTGGCTCCAGATGAGTATGAAGATCTTCATGACGAAAAGC
CCGACGAAGAAGGGCAAAGTGACGGTGATATTGACAAATTTAGTGGTGAGGATAATGTGGAAGGAGACTTCACAAAACTCACAGGGAGGAAAAAGAAATTGTTTGAACTT
AGGCTTAAGATGAATGAGGCACGGAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAGATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCT
TGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGAAAAAAGCGTATATGTTGGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAGT
GGGAGAAGGATCCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACATTGTACAATGCATACAAAAAGCGGACAAAGAATGTAAATGTTGACCTCGAGGAATACAAT
AAAATGAAAGAATCTGATCCTGAGTTCTATCGTGAGGCTTCAAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAA
GGAGCGGGAGGAGAAGAGAAGGTCATTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCTATCAATGATCGTAATGAGCATTTCAACAAAAAGATTGAGC
GGGCCTTTGGCCGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAA
Protein sequenceShow/hide protein sequence
MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKLTGRKKKLFEL
RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYN
KMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD