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Tan0007080 (gene) of Snake gourd v1 genome

Gene IDTan0007080
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG05:60841288..60841521
RNA-Seq ExpressionTan0007080
SyntenyTan0007080
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]7.5e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS
        +S++LAKKHE M+TA+EIMD +Q MFGQ S Q +H+ALKYI+N+RM EG SVR HVL+MMVHFN+AE NGA IDE+S
Subjt:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]7.5e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS
        +S++LAKKHE M+TA+EIMD +Q MFGQ S Q +H+ALKYI+N+RM EG SVR HVL+MMVHFN+AE NGA IDE+S
Subjt:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]7.5e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS
        +S++LAKKHE M+TA+EIMD +Q MFGQ S Q +H+ALKYI+N+RM EG SVR HVL+MMVHFN+AE NGA IDE+S
Subjt:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS

XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]4.0e-2374.67Show/hide
Query:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDE
        +SD+LAKKHE  ITAKEIMD +Q MFGQ S+QARH ALK+I+NSRM EG+SVR HVL++MVHFN+AESNGA IDE
Subjt:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDE

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]4.4e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS
        +SD+LAKKHE  +T KEIMD +Q MFGQ S QARH ALK+++NSRM EG+SVR HVL++MVHFN+AESNG  IDE S
Subjt:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein3.6e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS
        +S++LAKKHE M+TA+EIMD +Q MFGQ S Q +H+ALKYI+N+RM EG SVR HVL+MMVHFN+AE NGA IDE+S
Subjt:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS

A0A5A7V4M1 Gag/pol protein3.6e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS
        +S++LAKKHE M+TA+EIMD +Q MFGQ S Q +H+ALKYI+N+RM EG SVR HVL+MMVHFN+AE NGA IDE+S
Subjt:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS

A0A5D3CPJ6 Gag/pol protein3.6e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS
        +S++LAKKHE M+TA+EIMD +Q MFGQ S Q +H+ALKYI+N+RM EG SVR HVL+MMVHFN+AE NGA IDE+S
Subjt:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS

A0A6J1DFZ2 uncharacterized protein LOC1110200951.9e-2374.67Show/hide
Query:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDE
        +SD+LAKKHE  ITAKEIMD +Q MFGQ S+QARH ALK+I+NSRM EG+SVR HVL++MVHFN+AESNGA IDE
Subjt:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDE

A0A6J1DWL0 uncharacterized protein LOC1110247342.1e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS
        +SD+LAKKHE  +T KEIMD +Q MFGQ S QARH ALK+++NSRM EG+SVR HVL++MVHFN+AESNG  IDE S
Subjt:  MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGACATATTAGCCAAGAAGCATGAGGGCATGATTACCGCCAAGGAAATCATGGATTATGTGCAGGGTATGTTTGGACAACAGTCCACACAAGCCCGACATAATGC
CCTAAAGTACATATTCAACTCGAGGATGCCAGAGGGTACATCTGTTCGGCATCATGTCCTGGATATGATGGTACACTTTAACATCGCGGAGTCGAATGGTGCTTTCATCG
ATGAGTCGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGACATATTAGCCAAGAAGCATGAGGGCATGATTACCGCCAAGGAAATCATGGATTATGTGCAGGGTATGTTTGGACAACAGTCCACACAAGCCCGACATAATGC
CCTAAAGTACATATTCAACTCGAGGATGCCAGAGGGTACATCTGTTCGGCATCATGTCCTGGATATGATGGTACACTTTAACATCGCGGAGTCGAATGGTGCTTTCATCG
ATGAGTCGAGCTAG
Protein sequenceShow/hide protein sequence
MSDILAKKHEGMITAKEIMDYVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRHHVLDMMVHFNIAESNGAFIDESS