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Tan0007124 (gene) of Snake gourd v1 genome

Gene IDTan0007124
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG04:63128835..63129194
RNA-Seq ExpressionTan0007124
SyntenyTan0007124
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607014.1 Protein PTST, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.0e-0550.88Show/hide
Query:  MGTCSNTKALMAVLILMLSGSNCKVASLSPSNFGNNTVAAGASMWCDGRTEECLAGE
        M   +   A+ A+++L L+ SN   ASLS SNFGN T A   S WCD RTEECL G+
Subjt:  MGTCSNTKALMAVLILMLSGSNCKVASLSPSNFGNNTVAAGASMWCDGRTEECLAGE

KAG6607070.1 hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1545.6Show/hide
Query:  MGTCSNTKALMA--------VLILMLSGSNCKVASLSPSNFGNNTVAAGASMWCDGRTEECLAGEGHGESAFPGLLTFT-----------------LPNK
        MG  SN+ A+MA        V ILMLSGS+C VAS +PS++GN TVAA ASMWCDGR EEC+  E  GESAFP LL  T                  P  
Subjt:  MGTCSNTKALMA--------VLILMLSGSNCKVASLSPSNFGNNTVAAGASMWCDGRTEECLAGEGHGESAFPGLLTFT-----------------LPNK

Query:  RYRCLDGEREIPKPETCGSTFKRNC
           C +  R   K + CG T+ R C
Subjt:  RYRCLDGEREIPKPETCGSTFKRNC

KAG6607071.1 hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1546.09Show/hide
Query:  MGTCSNTKALMA-----VLILMLSGSNCKVASLSPSNFGNNTVAAGASMWCDGRTEECLAGEGHGESAFPGLLTFT-----------------LPNKRYR
        MG  SN+  +MA     V IL+LSGS+C VAS +PS++GNNTVAA ASMWCDGR EEC+  EG   SAFP L T T                  P++   
Subjt:  MGTCSNTKALMA-----VLILMLSGSNCKVASLSPSNFGNNTVAAGASMWCDGRTEECLAGEGHGESAFPGLLTFT-----------------LPNKRYR

Query:  CLDGEREIPKPETCG
        C +  R  P P  CG
Subjt:  CLDGEREIPKPETCG

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACTTGTTCAAACACCAAAGCTCTAATGGCGGTCCTCATTTTGATGCTCAGTGGAAGCAATTGCAAGGTTGCTTCTCTAAGTCCTTCAAATTTCGGCAACAACAC
TGTCGCTGCTGGGGCATCGATGTGGTGTGATGGTCGTACCGAAGAGTGCCTCGCCGGAGAAGGCCACGGTGAGTCGGCATTTCCAGGCCTGCTAACTTTTACACTCCCGA
ATAAAAGATATCGTTGTCTCGACGGAGAACGCGAAATTCCCAAGCCCGAAACTTGTGGGAGCACATTTAAGCGCAACTGTCCACCAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAACTTGTTCAAACACCAAAGCTCTAATGGCGGTCCTCATTTTGATGCTCAGTGGAAGCAATTGCAAGGTTGCTTCTCTAAGTCCTTCAAATTTCGGCAACAACAC
TGTCGCTGCTGGGGCATCGATGTGGTGTGATGGTCGTACCGAAGAGTGCCTCGCCGGAGAAGGCCACGGTGAGTCGGCATTTCCAGGCCTGCTAACTTTTACACTCCCGA
ATAAAAGATATCGTTGTCTCGACGGAGAACGCGAAATTCCCAAGCCCGAAACTTGTGGGAGCACATTTAAGCGCAACTGTCCACCAAAGTAA
Protein sequenceShow/hide protein sequence
MGTCSNTKALMAVLILMLSGSNCKVASLSPSNFGNNTVAAGASMWCDGRTEECLAGEGHGESAFPGLLTFTLPNKRYRCLDGEREIPKPETCGSTFKRNCPPK