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Tan0007146 (gene) of Snake gourd v1 genome

Gene IDTan0007146
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCACTA en-spm transposon protein
Genome locationLG06:19935991..19939696
RNA-Seq ExpressionTan0007146
SyntenyTan0007146
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038887408.1 poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]3.3e-2338.25Show/hide
Query:  SSTGETSDSSAHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKDYVKNKLL-------------
        S + + S     R RG SRN ELDR+V+IHGRI IEI +E+ K VC  AT+FSNAIGTI R + P+R   W DV  E++D V ++LL             
Subjt:  SSTGETSDSSAHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKDYVKNKLL-------------

Query:  -----------------------------------STFKEYRGDLVRHYRSL-PPDERREKPHKRVPDIANWHFLCDRWESSQ
                                           +TFKEYR DL +HYR    P E R  P KR+ D  +W+ LC+RWE+ +
Subjt:  -----------------------------------STFKEYRGDLVRHYRSL-PPDERREKPHKRVPDIANWHFLCDRWESSQ

XP_038887409.1 poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]1.1e-2645.51Show/hide
Query:  SSTGETSDSSAHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKDYVKNKLLS------------
        S + + S     R RG SRN ELDR+V+IHGRI IEI +E+ K VC  AT+FSNAIGTI R + P+R   W DV  E++D V ++LLS            
Subjt:  SSTGETSDSSAHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKDYVKNKLLS------------

Query:  ---------TFKEYRGDLVRHYRSL-PPDERREKPHKRVPDIANWHFLCDRWESSQ
                 TFKEYR DL +HYR    P E R  P KR+ D  +W+ LC+RWE+ +
Subjt:  ---------TFKEYRGDLVRHYRSL-PPDERREKPHKRVPDIANWHFLCDRWESSQ

XP_038887410.1 poly [ADP-ribose] polymerase 1-like isoform X3 [Benincasa hispida]3.3e-2338.25Show/hide
Query:  SSTGETSDSSAHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKDYVKNKLL-------------
        S + + S     R RG SRN ELDR+V+IHGRI IEI +E+ K VC  AT+FSNAIGTI R + P+R   W DV  E++D V ++LL             
Subjt:  SSTGETSDSSAHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKDYVKNKLL-------------

Query:  -----------------------------------STFKEYRGDLVRHYRSL-PPDERREKPHKRVPDIANWHFLCDRWESSQ
                                           +TFKEYR DL +HYR    P E R  P KR+ D  +W+ LC+RWE+ +
Subjt:  -----------------------------------STFKEYRGDLVRHYRSL-PPDERREKPHKRVPDIANWHFLCDRWESSQ

XP_038887411.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida]3.3e-2338.25Show/hide
Query:  SSTGETSDSSAHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKDYVKNKLL-------------
        S + + S     R RG SRN ELDR+V+IHGRI IEI +E+ K VC  AT+FSNAIGTI R + P+R   W DV  E++D V ++LL             
Subjt:  SSTGETSDSSAHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKDYVKNKLL-------------

Query:  -----------------------------------STFKEYRGDLVRHYRSL-PPDERREKPHKRVPDIANWHFLCDRWESSQ
                                           +TFKEYR DL +HYR    P E R  P KR+ D  +W+ LC+RWE+ +
Subjt:  -----------------------------------STFKEYRGDLVRHYRSL-PPDERREKPHKRVPDIANWHFLCDRWESSQ

XP_038887413.1 uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]3.3e-2338.25Show/hide
Query:  SSTGETSDSSAHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKDYVKNKLL-------------
        S + + S     R RG SRN ELDR+V+IHGRI IEI +E+ K VC  AT+FSNAIGTI R + P+R   W DV  E++D V ++LL             
Subjt:  SSTGETSDSSAHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKDYVKNKLL-------------

Query:  -----------------------------------STFKEYRGDLVRHYRSL-PPDERREKPHKRVPDIANWHFLCDRWESSQ
                                           +TFKEYR DL +HYR    P E R  P KR+ D  +W+ LC+RWE+ +
Subjt:  -----------------------------------STFKEYRGDLVRHYRSL-PPDERREKPHKRVPDIANWHFLCDRWESSQ

TrEMBL top hitse value%identityAlignment
A0A5A7SN68 CACTA en-spm transposon protein3.5e-1840.25Show/hide
Query:  FENNALSAVANPTTTVVSSTGETSDSS--AHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKDY
        FE++  + +A  +++V  +T  +S  +    R R  SR  EL+R+V+I+GRIP+ I    EK +   A RFS AIG  VR++FPVR  KW DV  E  + 
Subjt:  FENNALSAVANPTTTVVSSTGETSDSS--AHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKDY

Query:  VKN--KLLSTFKEYRGDLVRHYRSL-PPDERREKP-HKRVPDIANWHFLCDRWESSQCQ
        VK   ++L+TFKE+R D  RH++    P+E R  P +  V    +WHFLCD + S   Q
Subjt:  VKN--KLLSTFKEYRGDLVRHYRSL-PPDERREKP-HKRVPDIANWHFLCDRWESSQCQ

A0A5A7TBR8 CACTA en-spm transposon protein9.2e-1938.79Show/hide
Query:  FENNALSAVANPTTTVVSSTGETSDSSAH---RVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKD
        FE++  + +   +++V  +T E+S   A+   R R  SR  EL+R+V+I+GRIP+ I    EK +   A RFS AIG  VR++FPV   KW DV  E  +
Subjt:  FENNALSAVANPTTTVVSSTGETSDSSAH---RVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKD

Query:  YVK-------NKLLSTFKEYRGDLVRHYR--SLPPDERREKPHKRVPDIANWHFLCDRWESSQCQ
         VK       +++L+TFKE+R D  RH++  S P + R   P+  V    +WHFLCD + S   Q
Subjt:  YVK-------NKLLSTFKEYRGDLVRHYR--SLPPDERREKPHKRVPDIANWHFLCDRWESSQCQ

A0A5A7V882 CACTA en-spm transposon protein3.5e-1836.31Show/hide
Query:  FENNALSAVANPTTTVVSSTGETSDSSA---HRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTE---
        FE++  + +A  +++V  +T E+S   A    R R  SR  EL+R+V+I+GRIP+ I    EK +   A RFS AIG  VR++FPVR  KW DV  E   
Subjt:  FENNALSAVANPTTTVVSSTGETSDSSA---HRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTE---

Query:  ------------------LKDYVKNKLLSTFKEYRGDLVRHYR--SLPPDERREKPHKRVPDIANWHFLCDRWESSQCQ
                          +  +V++++L+TFKE+R D  RH++  S P + R   P+  V    +WHFLCD + S   Q
Subjt:  ------------------LKDYVKNKLLSTFKEYRGDLVRHYR--SLPPDERREKPHKRVPDIANWHFLCDRWESSQCQ

A0A5D3CKF7 CACTA en-spm transposon protein1.6e-1840.25Show/hide
Query:  FENNALSAVANPTTTVVSSTGETSDSS--AHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKDY
        FE++ L  +A  +++V  +TG +S  +    R R  SR  EL+R+V+I+GRIP+ I    EK +     RFS AIG  VR++FPVR  KW DV  E  + 
Subjt:  FENNALSAVANPTTTVVSSTGETSDSS--AHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELKDY

Query:  VKN--KLLSTFKEYRGDLVRHYR--SLPPDERREKPHKRVPDIANWHFLCDRWESSQCQ
        VK   ++L+TFKE+R D  +H++  S P + R   P+  V    +WHFLCD + S   Q
Subjt:  VKN--KLLSTFKEYRGDLVRHYR--SLPPDERREKPHKRVPDIANWHFLCDRWESSQCQ

A0A5D3D841 CACTA en-spm transposon protein3.5e-1838.04Show/hide
Query:  LSAVANPTTTVVSSTGETSDSSAHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTE-----------
        L+AV  P+ T+ SS+ + + +   R +  SR  EL+R+V+I+GRIP+ IT   EK +   A RFS AIG  VR++FPVR  KW DV  E           
Subjt:  LSAVANPTTTVVSSTGETSDSSAHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTE-----------

Query:  ----------LKDYVKNKLLSTFKEYRGDLVRHYR--SLPPDERREKPHKRVPDIANWHFLCD
                  +  +V++++L+TFKE+R D  RH++  S P + R   P+  V    +WHFLCD
Subjt:  ----------LKDYVKNKLLSTFKEYRGDLVRHYR--SLPPDERREKPHKRVPDIANWHFLCD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCACTCTGTTGAGTTAGGAGATGAGGCGACTAATCTTTTTGAAAATAACGCCCTCAGCGCTGTCGCTAACCCTACCACCACAGTAGTGTCTTCTACGGGCGAGAC
TTCAGATAGTTCTGCCCATAGAGTAAGAGGATTCTCAAGGAACAAAGAGCTTGATAGATATGTTAGCATTCATGGGAGAATTCCAATAGAAATAACTGATGAATTGGAGA
AGTCTGTGTGCGATTTTGCCACAAGATTTAGCAATGCAATTGGTACGATAGTTCGAGAATCATTTCCAGTACGTATAACGAAGTGGAAAGATGTGCCTACAGAACTGAAA
GACTATGTGAAAAACAAACTCTTGAGTACTTTTAAGGAGTATAGGGGAGACTTGGTTAGACACTATAGAAGTTTGCCTCCTGACGAAAGACGTGAAAAACCACATAAACG
AGTTCCTGACATTGCTAATTGGCATTTCTTATGTGACAGGTGGGAGTCTTCTCAATGTCAGGTACGTTATTTACCTTTCTTAACAAGTACGTCATCTCACACGCATAATA
CTAGGTTGATTTATTGA
mRNA sequenceShow/hide mRNA sequence
CCGAAGCATAGATAATGATGCACTCTGTTGAGTTAGGAGATGAGGCGACTAATCTTTTTGAAAATAACGCCCTCAGCGCTGTCGCTAACCCTACCACCACAGTAGTGTCT
TCTACGGGCGAGACTTCAGATAGTTCTGCCCATAGAGTAAGAGGATTCTCAAGGAACAAAGAGCTTGATAGATATGTTAGCATTCATGGGAGAATTCCAATAGAAATAAC
TGATGAATTGGAGAAGTCTGTGTGCGATTTTGCCACAAGATTTAGCAATGCAATTGGTACGATAGTTCGAGAATCATTTCCAGTACGTATAACGAAGTGGAAAGATGTGC
CTACAGAACTGAAAGACTATGTGAAAAACAAACTCTTGAGTACTTTTAAGGAGTATAGGGGAGACTTGGTTAGACACTATAGAAGTTTGCCTCCTGACGAAAGACGTGAA
AAACCACATAAACGAGTTCCTGACATTGCTAATTGGCATTTCTTATGTGACAGGTGGGAGTCTTCTCAATGTCAGGTACGTTATTTACCTTTCTTAACAAGTACGTCATC
TCACACGCATAATACTAGGTTGATTTATTGATAATCTATTTTGTTAGAAAACTATGAAGACAAACAAAAAGAACCGCAAGAAGCTGCCATGGAACCATTACATTGGGTCT
AAGTCCTTCATGCACGTACTGCAAAAACAGGCAAGTTGGAGACAAAGGAAGAGTTAAATTGTGCCAAAGCTAAAATCACAAGTACGAGAGAGAAACTAGATGAAGTTGAA
ACCCGAACTACAAATGGGTCAACCTTCGATCAATGCTTACACAACTATTAAACTCACAAGGAGGACCTTCTACATAGAAGATACCTAGACTTACGAGTCGAGACAAAGGC
GTTAGCTTAGCGAGTTATAGAGATGGCGAGAAGGTTCCTAGAGTCTTAGCTTGAGTCGTGTTTTAGGTTATGTTCTTATGTGTTGCCTTTATTGAACTCTGAGTAGGTTT
TTTGTTAAACTTTGAGTAGTCTTCTTGGTGAACTCTTTTCTTTGCTTTCTTGTTGAGTTCTTTTGTTCTTGTTGACAATGTTAG
Protein sequenceShow/hide protein sequence
MMHSVELGDEATNLFENNALSAVANPTTTVVSSTGETSDSSAHRVRGFSRNKELDRYVSIHGRIPIEITDELEKSVCDFATRFSNAIGTIVRESFPVRITKWKDVPTELK
DYVKNKLLSTFKEYRGDLVRHYRSLPPDERREKPHKRVPDIANWHFLCDRWESSQCQVRYLPFLTSTSSHTHNTRLIY