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Tan0007163 (gene) of Snake gourd v1 genome

Gene IDTan0007163
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG07:61932345..61932761
RNA-Seq ExpressionTan0007163
SyntenyTan0007163
Gene Ontology termsGO:0009059 - macromolecule biosynthetic process (biological process)
GO:0010467 - gene expression (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044271 - cellular nitrogen compound biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3622233.1 hypothetical protein FXO38_31400 [Capsicum annuum]4.3e-3666.15Show/hide
Query:  KIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILANLHGIST
        K ++EKFDG++NFG+WQVQVKDVLIQSGLHKALK RP+    EK + D +++ESS    + S+KS +SDEE +ELD++AAS IRL LAKN+LAN+ G+ST
Subjt:  KIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILANLHGIST

Query:  AKELWEKLDAVYQAKSISNRLYLKEQFHTL
         KELWEKL+ +YQ KSISNRLYLKEQFH L
Subjt:  AKELWEKLDAVYQAKSISNRLYLKEQFHTL

KAF5463231.1 hypothetical protein F2P56_019161 [Juglans regia]3.0e-3763.5Show/hide
Query:  SSFMSPVKIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILA
        S   + ++ +VEKFDG++NFGLWQVQVKDVLIQSGLHKALKGRP+     ++SSD   T+ +        +S MSDE+ ++LDLRAASAIRL LAKN+LA
Subjt:  SSFMSPVKIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILA

Query:  NLHGISTAKELWEKLDAVYQAKSISNRLYLKEQFHTL
        N+HGISTAK+LWEKL+ +YQ K +SNR+YLKEQFHTL
Subjt:  NLHGISTAKELWEKLDAVYQAKSISNRLYLKEQFHTL

KAF5765959.1 putative RNA-directed DNA polymerase [Helianthus annuus]3.6e-3563.91Show/hide
Query:  SPVKIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILANLHG
        SP++ DVEK+DG++NFGLWQVQVKDVLIQSGLHKAL+G+P              T  S   + G+ K    DEE ++LDLRAASAIRL LAKN+LAN+HG
Subjt:  SPVKIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILANLHG

Query:  ISTAKELWEKLDAVYQAKSISNRLYLKEQFHTL
        ISTAK+LWEKL+ +YQ K I NRLYLKEQFHTL
Subjt:  ISTAKELWEKLDAVYQAKSISNRLYLKEQFHTL

KAF7802225.1 cytochrome p450 [Senna tora]5.6e-3665.22Show/hide
Query:  MSSFMSPVKIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNIL
        MS F S VK DVEKFDG++NFGLWQVQVKDVLIQSGLHKAL+G+ S       S D +++E           SSMSD + +ELDLRAAS IRL+LAKN+L
Subjt:  MSSFMSPVKIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNIL

Query:  ANLHGISTAKELWEKLDAVYQAKSISNRLYLKEQFHTL
        AN+ GISTAKELW+KL+ +YQAK ISN L LKEQFHTL
Subjt:  ANLHGISTAKELWEKLDAVYQAKSISNRLYLKEQFHTL

XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]7.3e-5282.61Show/hide
Query:  MSSFMSPVKIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNIL
        MS FMSPVKIDVEKFDG +NFGLWQVQVKDVLIQS LHKALKGRPS G  EKLS DG   ESSGGS+RGSKKSSMS E+ +E+DLRAASAIR +LAKNIL
Subjt:  MSSFMSPVKIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNIL

Query:  ANLHGISTAKELWEKLDAVYQAKSISNRLYLKEQFHTL
        AN+H ISTAKELWEKL+A+YQAK ISNRLYLKEQFHTL
Subjt:  ANLHGISTAKELWEKLDAVYQAKSISNRLYLKEQFHTL

TrEMBL top hitse value%identityAlignment
A0A2G2YJH4 Uncharacterized protein1.7e-3360Show/hide
Query:  FMSPVKIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILANL
        +M   K ++EKFDG++NFGLWQVQVKDVLIQSGLHKALK RP+ G        GD+      S+  S+KS +SDEE +ELD++  S IRL LAK +L N+
Subjt:  FMSPVKIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILANL

Query:  HGISTAKELWEKLDAVYQAKSISNRLYLKEQFHTL
         G+ST K+LWEKL+ +YQ KSISNRLYLKEQFH L
Subjt:  HGISTAKELWEKLDAVYQAKSISNRLYLKEQFHTL

A0A6A2YS90 Transcription initiation factor IIA subunit 21.1e-3260.77Show/hide
Query:  KIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILANLHGIST
        + D+EKFDG++NFGLWQVQVKD+LIQSGL+KALKG+P+        S+G + +    S+    KS MS+EE +ELD+RAAS IRL LAKN+LAN+   S+
Subjt:  KIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILANLHGIST

Query:  AKELWEKLDAVYQAKSISNRLYLKEQFHTL
         KELWEKL+ +YQAKS+SNRLYLKE+FH L
Subjt:  AKELWEKLDAVYQAKSISNRLYLKEQFHTL

A0A6A3BK59 CCHC-type domain-containing protein1.1e-3260.77Show/hide
Query:  KIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILANLHGIST
        + D+EKFDG++NFGLWQVQVKD+LIQSGL+KALKG+P+        S+G + +    S+    KS MS+EE +ELD+RAAS IRL LAKN+LAN+   S+
Subjt:  KIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILANLHGIST

Query:  AKELWEKLDAVYQAKSISNRLYLKEQFHTL
         KELWEKL+ +YQAKS+SNRLYLKE+FH L
Subjt:  AKELWEKLDAVYQAKSISNRLYLKEQFHTL

A0A6A3CWI3 CCHC-type domain-containing protein1.1e-3260.77Show/hide
Query:  KIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILANLHGIST
        + D+EKFDG++NFGLWQVQVKD+LIQSGL+KALKG+P+        S+G + +    S+    KS MS+EE +ELD+RAAS IRL LAKN+LAN+   S+
Subjt:  KIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILANLHGIST

Query:  AKELWEKLDAVYQAKSISNRLYLKEQFHTL
         KELWEKL+ +YQAKS+SNRLYLKE+FH L
Subjt:  AKELWEKLDAVYQAKSISNRLYLKEQFHTL

A0A6J1CG82 uncharacterized protein LOC1110105213.5e-5282.61Show/hide
Query:  MSSFMSPVKIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNIL
        MS FMSPVKIDVEKFDG +NFGLWQVQVKDVLIQS LHKALKGRPS G  EKLS DG   ESSGGS+RGSKKSSMS E+ +E+DLRAASAIR +LAKNIL
Subjt:  MSSFMSPVKIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNIL

Query:  ANLHGISTAKELWEKLDAVYQAKSISNRLYLKEQFHTL
        AN+H ISTAKELWEKL+A+YQAK ISNRLYLKEQFHTL
Subjt:  ANLHGISTAKELWEKLDAVYQAKSISNRLYLKEQFHTL

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-1537.31Show/hide
Query:  MSPVKIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILANLH
        MS VK +V KF+G   F  WQ +++D+LIQ GLHK L              D D            K  +M  E+  +LD RAASAIRL+L+ +++ N+ 
Subjt:  MSPVKIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILANLH

Query:  GISTAKELWEKLDAVYQAKSISNRLYLKEQFHTL
           TA+ +W +L+++Y +K+++N+LYLK+Q + L
Subjt:  GISTAKELWEKLDAVYQAKSISNRLYLKEQFHTL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGCTTTATGAGTCCAGTAAAGATTGATGTGGAGAAATTTGACGGAAAGATGAATTTTGGCTTGTGGCAAGTTCAAGTCAAAGATGTGCTGATACAATCTGGGTT
ACACAAGGCTTTAAAGGGAAGACCAAGCTGTGGTGTTCTTGAAAAGTTAAGCAGTGATGGTGATCAAACGGAGTCCAGTGGTGGTTCCAACAGAGGTTCTAAGAAGTCTA
GCATGAGTGATGAAGAATCGGATGAATTAGATTTGAGAGCTGCAAGTGCAATCAGACTAAATTTGGCTAAGAATATTCTTGCAAATTTGCATGGAATTTCGACAGCCAAA
GAGCTTTGGGAGAAGCTTGATGCGGTGTATCAGGCAAAGAGCATCTCAAATCGATTGTACCTGAAGGAGCAATTTCACACGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGCTTTATGAGTCCAGTAAAGATTGATGTGGAGAAATTTGACGGAAAGATGAATTTTGGCTTGTGGCAAGTTCAAGTCAAAGATGTGCTGATACAATCTGGGTT
ACACAAGGCTTTAAAGGGAAGACCAAGCTGTGGTGTTCTTGAAAAGTTAAGCAGTGATGGTGATCAAACGGAGTCCAGTGGTGGTTCCAACAGAGGTTCTAAGAAGTCTA
GCATGAGTGATGAAGAATCGGATGAATTAGATTTGAGAGCTGCAAGTGCAATCAGACTAAATTTGGCTAAGAATATTCTTGCAAATTTGCATGGAATTTCGACAGCCAAA
GAGCTTTGGGAGAAGCTTGATGCGGTGTATCAGGCAAAGAGCATCTCAAATCGATTGTACCTGAAGGAGCAATTTCACACGCTGTGA
Protein sequenceShow/hide protein sequence
MSSFMSPVKIDVEKFDGKMNFGLWQVQVKDVLIQSGLHKALKGRPSCGVLEKLSSDGDQTESSGGSNRGSKKSSMSDEESDELDLRAASAIRLNLAKNILANLHGISTAK
ELWEKLDAVYQAKSISNRLYLKEQFHTL