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Tan0007177 (gene) of Snake gourd v1 genome

Gene IDTan0007177
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionserine-rich protein-related
Genome locationLG06:2436045..2436614
RNA-Seq ExpressionTan0007177
SyntenyTan0007177
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7043877.1 unnamed protein product [Microthlaspi erraticum]3.6e-0741.56Show/hide
Query:  MCYPAVVPV----------YRAAALRGVAAEQEAVRQQRSGGG--NKCICSPTTHPGSFRCRFHHREYKWVSRSRIS
        MCY  ++P+            AA +  V  E  A+   R GGG   KC+CSP+ HPGSF+CR+HH EY+W+  S  S
Subjt:  MCYPAVVPV----------YRAAALRGVAAEQEAVRQQRSGGG--NKCICSPTTHPGSFRCRFHHREYKWVSRSRIS

CAF2214202.1 unnamed protein product [Brassica napus]4.7e-0741.03Show/hide
Query:  MCYPAVVPV-------YRAAALRGVAAEQEAVR---QQRSGGG--NKCICSPTTHPGSFRCRFHHREYKWVSRSRISK
        MCY  ++P+       +      GV    E V    + R GGG   KC+CSP+THP SF+CR+HH EY+WV  S + K
Subjt:  MCYPAVVPV-------YRAAALRGVAAEQEAVR---QQRSGGG--NKCICSPTTHPGSFRCRFHHREYKWVSRSRISK

KGN45357.1 hypothetical protein Csa_016243 [Cucumis sativus]2.1e-1564.38Show/hide
Query:  MCYPAVVPVYRAAAL-------RGVAAEQEAVRQQRSGGGNKCICSPTTHPGSFRCRFHHREYKWVSRSRISK
        MCYP  +P +R  A          VAA +EAVRQQRSGGG KCICSPTTHPGSF+CRFH  +YKWVSRS  SK
Subjt:  MCYPAVVPVYRAAAL-------RGVAAEQEAVRQQRSGGGNKCICSPTTHPGSFRCRFHHREYKWVSRSRISK

PLY76495.1 hypothetical protein LSAT_4X103641 [Lactuca sativa]8.1e-0750Show/hide
Query:  MCYPAVVPVYRA----AALRGVAAEQEAVRQQRSGGG---NKCICSPTTHPGSFRCRFHHREYKWV
        MCYPA V           +R +AA   AV  + +GGG    +C+CSPT HPGSFRCR HH EY WV
Subjt:  MCYPAVVPVYRA----AALRGVAAEQEAVRQQRSGGG---NKCICSPTTHPGSFRCRFHHREYKWV

XP_022846371.1 uncharacterized protein LOC111369102 [Olea europaea var. sylvestris]8.1e-0747.69Show/hide
Query:  VVPVYRAAALRGVAAEQEAVRQQRSGGGN---------KCICSPTTHPGSFRCRFHHREYKWVSR
        V P   +AA+  VA +QE V    + GG+         +C+CSPT HPGSFRCR HH EY+WV R
Subjt:  VVPVYRAAALRGVAAEQEAVRQQRSGGGN---------KCICSPTTHPGSFRCRFHHREYKWVSR

TrEMBL top hitse value%identityAlignment
A0A078IDV4 BnaC03g69280D protein8.7e-0741.89Show/hide
Query:  MCYPAVVPV-------YRAAALRGVAAEQEAVR---QQRSGGG--NKCICSPTTHPGSFRCRFHHREYKWVSRS
        MCY   +P+       +    + GV    E V    + R GGG   KC+CSP+THP SF+CR+HH EY+WV  S
Subjt:  MCYPAVVPV-------YRAAALRGVAAEQEAVR---QQRSGGG--NKCICSPTTHPGSFRCRFHHREYKWVSRS

A0A0A0KAE1 Uncharacterized protein1.0e-1564.38Show/hide
Query:  MCYPAVVPVYRAAAL-------RGVAAEQEAVRQQRSGGGNKCICSPTTHPGSFRCRFHHREYKWVSRSRISK
        MCYP  +P +R  A          VAA +EAVRQQRSGGG KCICSPTTHPGSF+CRFH  +YKWVSRS  SK
Subjt:  MCYPAVVPVYRAAAL-------RGVAAEQEAVRQQRSGGGNKCICSPTTHPGSFRCRFHHREYKWVSRSRISK

A0A2J6KN41 Uncharacterized protein3.9e-0750Show/hide
Query:  MCYPAVVPVYRA----AALRGVAAEQEAVRQQRSGGG---NKCICSPTTHPGSFRCRFHHREYKWV
        MCYPA V           +R +AA   AV  + +GGG    +C+CSPT HPGSFRCR HH EY WV
Subjt:  MCYPAVVPVYRA----AALRGVAAEQEAVRQQRSGGG---NKCICSPTTHPGSFRCRFHHREYKWV

A0A3N6Q757 Uncharacterized protein1.1e-0641.89Show/hide
Query:  MCYPAVVPV-------YRAAALRGVAAEQE---AVRQQRSGGG--NKCICSPTTHPGSFRCRFHHREYKWVSRS
        MCY  ++P+       +      GV    E    V + R GGG   KC+CSP+THP SF+CR+HH EY+WV  S
Subjt:  MCYPAVVPV-------YRAAALRGVAAEQE---AVRQQRSGGG--NKCICSPTTHPGSFRCRFHHREYKWVSRS

A0A6D2K7L8 Uncharacterized protein1.8e-0741.56Show/hide
Query:  MCYPAVVPV----------YRAAALRGVAAEQEAVRQQRSGGG--NKCICSPTTHPGSFRCRFHHREYKWVSRSRIS
        MCY  ++P+            AA +  V  E  A+   R GGG   KC+CSP+ HPGSF+CR+HH EY+W+  S  S
Subjt:  MCYPAVVPV----------YRAAALRGVAAEQEAVRQQRSGGG--NKCICSPTTHPGSFRCRFHHREYKWVSRSRIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52342.1 unknown protein4.6e-0837.97Show/hide
Query:  MCYPAVVPVY---------RAAALRGVAAEQEAVRQQRSGGG-----NKCICSPTTHPGSFRCRFHHREYKWVSRSRIS
        MCY  ++P+             A   VA + EA    RSGG       KC+CSP+ HP SF+CR+H  EY+W+  S  S
Subjt:  MCYPAVVPVY---------RAAALRGVAAEQEAVRQQRSGGG-----NKCICSPTTHPGSFRCRFHHREYKWVSRSRIS

AT1G67910.1 unknown protein1.1e-0451.43Show/hide
Query:  VAAEQEAVRQQRSGGGNKCICSPTTHPGSFRCRFH
        V      + +Q S     C+CSPTTHPGSFRCR H
Subjt:  VAAEQEAVRQQRSGGGNKCICSPTTHPGSFRCRFH

AT1G67910.2 unknown protein1.1e-0451.43Show/hide
Query:  VAAEQEAVRQQRSGGGNKCICSPTTHPGSFRCRFH
        V      + +Q S     C+CSPTTHPGSFRCR H
Subjt:  VAAEQEAVRQQRSGGGNKCICSPTTHPGSFRCRFH

AT3G13227.1 serine-rich protein-related3.6e-0546.51Show/hide
Query:  RQQRSGGG--------------NKCICSPTTHPGSFRCRFHHR
        R +R GGG                C+C+PTTHPGSFRCR+H R
Subjt:  RQQRSGGG--------------NKCICSPTTHPGSFRCRFHHR

AT5G20370.1 serine-rich protein-related9.5e-0685Show/hide
Query:  KCICSPTTHPGSFRCRFHHR
        KC+CSPTTHPGSFRC FH R
Subjt:  KCICSPTTHPGSFRCRFHHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTACCCGGCCGTCGTTCCCGTTTACAGAGCTGCCGCCTTGCGCGGAGTTGCGGCGGAGCAGGAAGCCGTCCGGCAGCAGAGAAGTGGCGGTGGAAACAAGTGTAT
TTGCTCGCCGACGACCCACCCAGGTTCTTTCAGATGTAGATTTCATCATAGAGAGTATAAATGGGTTAGCCGATCGAGAATTTCAAAACCCCACATGCTTTAA
mRNA sequenceShow/hide mRNA sequence
CTCTTCTCTTTTCCTCTCTTTTAAGATAACTCTACCATTTTCCCTTCCATTAACATTTAATTTAACACACCATTTTCACAATTACTCCAAATCAACCTTTTCCCATTTCC
TTCGTCTTCAAGCCATTTACAAAATCACCGCCTTTAAAATAAATGTGTTACCCGGCCGTCGTTCCCGTTTACAGAGCTGCCGCCTTGCGCGGAGTTGCGGCGGAGCAGGA
AGCCGTCCGGCAGCAGAGAAGTGGCGGTGGAAACAAGTGTATTTGCTCGCCGACGACCCACCCAGGTTCTTTCAGATGTAGATTTCATCATAGAGAGTATAAATGGGTTA
GCCGATCGAGAATTTCAAAACCCCACATGCTTTAATAACAATTTATATATGTTTATATATATACAAAATCTGTATATATGAAATATGTGGATTGGGTCTGTTTGTTGTGA
TTGTTTTTTAAACTAAATAGTCTGCAAATAGGCTGTGTTGTGAAATGTGATGTTTCTGTTCGTTTTGGGACATTGGTTTTTAATTTTTATATGGTGTAATTATCTGACTC
AGAATTGTGTTGAAATCAAG
Protein sequenceShow/hide protein sequence
MCYPAVVPVYRAAALRGVAAEQEAVRQQRSGGGNKCICSPTTHPGSFRCRFHHREYKWVSRSRISKPHML