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Tan0007178 (gene) of Snake gourd v1 genome

Gene IDTan0007178
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG10:32064245..32064466
RNA-Seq ExpressionTan0007178
SyntenyTan0007178
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]7.6e-2476.71Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]7.6e-2476.71Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]7.6e-2476.71Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]7.6e-2476.71Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]7.6e-2476.71Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein3.7e-2476.71Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
A0A5A7TU93 Gag/pol protein3.7e-2476.71Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
A0A5A7TWB9 Gag/pol protein3.7e-2476.71Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
A0A5A7V4M1 Gag/pol protein3.7e-2476.71Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
A0A5D3CPJ6 Gag/pol protein3.7e-2476.71Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCCTTGCAGGAAATGTTTGGACAACAGTCCTTTCAGGTCCGACATGACTCGCTCAAATACGTCTTCAACGCACGGATGAAAGAGGGGTCATCTGTCCGTGAACA
TGTTCTAAACATGATGACCCACTTTAATCTGGCTGAGATGAACGGGACTTCGATCGACGAGTCGAGCCAAGTCAGTTTTATTTTGGAGACTCTTCCGAAGAGTTTTCTTT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCCTTGCAGGAAATGTTTGGACAACAGTCCTTTCAGGTCCGACATGACTCGCTCAAATACGTCTTCAACGCACGGATGAAAGAGGGGTCATCTGTCCGTGAACA
TGTTCTAAACATGATGACCCACTTTAATCTGGCTGAGATGAACGGGACTTCGATCGACGAGTCGAGCCAAGTCAGTTTTATTTTGGAGACTCTTCCGAAGAGTTTTCTTT
AG
Protein sequenceShow/hide protein sequence
MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGTSIDESSQVSFILETLPKSFL