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Tan0007182 (gene) of Snake gourd v1 genome

Gene IDTan0007182
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG08:53025721..53025954
RNA-Seq ExpressionTan0007182
SyntenyTan0007182
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]8.9e-2370.13Show/hide
Query:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
        +S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MMVHFN+AE+NGA IDE+S
Subjt:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]8.9e-2370.13Show/hide
Query:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
        +S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MMVHFN+AE+NGA IDE+S
Subjt:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]8.9e-2370.13Show/hide
Query:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
        +S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MMVHFN+AE+NGA IDE+S
Subjt:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]8.9e-2370.13Show/hide
Query:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
        +S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MMVHFN+AE+NGA IDE+S
Subjt:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]8.9e-2370.13Show/hide
Query:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
        +S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MMVHFN+AE+NGA IDE+S
Subjt:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein4.3e-2370.13Show/hide
Query:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
        +S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MMVHFN+AE+NGA IDE+S
Subjt:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
A0A5A7TU93 Gag/pol protein4.3e-2370.13Show/hide
Query:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
        +S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MMVHFN+AE+NGA IDE+S
Subjt:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
A0A5A7TWB9 Gag/pol protein4.3e-2370.13Show/hide
Query:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
        +S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MMVHFN+AE+NGA IDE+S
Subjt:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
A0A5A7V4M1 Gag/pol protein4.3e-2370.13Show/hide
Query:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
        +S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MMVHFN+AE+NGA IDE+S
Subjt:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
A0A5D3CPJ6 Gag/pol protein4.3e-2370.13Show/hide
Query:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
        +S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MMVHFN+AE+NGA IDE+S
Subjt:  MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGACATATTAGCCAAGAAGCATGAGGGCATGATGACCGCTAAGGAAATCATGGATTCAATGCAGGGTATGTTTGGACAACAATCCACACAGGCCCGACACAATGC
CCTCAAGTACATATTCAACTCGAGGATGCAAGAGGGTACATCTGTTCGGGATCATGTTCTGGATATGATGGTACACTTTAACATCGCGGAGTTGAATGGTGCTTCCATCG
ATGAATCGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGACATATTAGCCAAGAAGCATGAGGGCATGATGACCGCTAAGGAAATCATGGATTCAATGCAGGGTATGTTTGGACAACAATCCACACAGGCCCGACACAATGC
CCTCAAGTACATATTCAACTCGAGGATGCAAGAGGGTACATCTGTTCGGGATCATGTTCTGGATATGATGGTACACTTTAACATCGCGGAGTTGAATGGTGCTTCCATCG
ATGAATCGAGCTAG
Protein sequenceShow/hide protein sequence
MSDILAKKHEGMMTAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMQEGTSVRDHVLDMMVHFNIAELNGASIDESS