; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007188 (gene) of Snake gourd v1 genome

Gene IDTan0007188
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPectin lyase-like superfamily protein
Genome locationLG02:96795199..96797156
RNA-Seq ExpressionTan0007188
SyntenyTan0007188
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0009987 - cellular process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598216.1 Polygalacturonase, partial [Cucurbita argyrosperma subsp. sororia]1.0e-7085.71Show/hide
Query:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC----------------GGSGSALN
        MPSIKPTALRFYGSFN TVTGITIQNSPQCHLKFDNCVGVLVHD SVSSPGDSLNTDGIHLQNSKDVLIHS+SLSC                GGSGS  N
Subjt:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC----------------GGSGSALN

Query:  VLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNL
        VLFSNIQMSEVQLPIVIDQFYCDK+KC+NQTSAVALSGINYEKIRGTYTVKPVHFACSDNL
Subjt:  VLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNL

KAG6601507.1 Polygalacturonase, partial [Cucurbita argyrosperma subsp. sororia]9.7e-6686.9Show/hide
Query:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSCGGSGSALNVLFSNIQMSEVQLPIV
        MP IKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNC+GVLVHD SVSSP DS NTDGIHLQNSKDVLIH+T+LSC   G    VLFSNIQ+SEV++PIV
Subjt:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSCGGSGSALNVLFSNIQMSEVQLPIV

Query:  IDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNL
        IDQFYCDK KCSNQTSAVALSGINYE+IRGTYTVKPVHFACSDNL
Subjt:  IDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNL

XP_004142980.2 polygalacturonase At1g48100 [Cucumis sativus]4.3e-6666.99Show/hide
Query:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------
        MPSIKPTALRFYGSFN TVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC                        
Subjt:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------

Query:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP
                                                GGSGS  NVLFSNIQMSEVQLPIVIDQFYCDK+KCSNQTSAVALSGINYE+IRGTYTVKP
Subjt:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP

Query:  VHFACSDNL
        VHFACSDNL
Subjt:  VHFACSDNL

XP_022131822.1 polygalacturonase At1g48100-like [Momordica charantia]6.7e-6767.94Show/hide
Query:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------
        MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC                        
Subjt:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------

Query:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP
                                                GGSGS  NVLFSNIQMSEVQLPIVIDQFYCDK+KCSNQTSAVALSGINYEKIRGTYTVKP
Subjt:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP

Query:  VHFACSDNL
        VHFACSDNL
Subjt:  VHFACSDNL

XP_038885127.1 polygalacturonase At1g48100 [Benincasa hispida]4.3e-6666.99Show/hide
Query:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------
        MPSIKPTALRFYGSFN TVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC                        
Subjt:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------

Query:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP
                                                GGSGS  NVLFSNIQMSEVQLPIVIDQFYCDK+KCSNQTSAVALSGINYE+IRGTYTVKP
Subjt:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP

Query:  VHFACSDNL
        VHFACSDNL
Subjt:  VHFACSDNL

TrEMBL top hitse value%identityAlignment
A0A0A0LNA5 Uncharacterized protein2.1e-6666.99Show/hide
Query:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------
        MPSIKPTALRFYGSFN TVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC                        
Subjt:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------

Query:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP
                                                GGSGS  NVLFSNIQMSEVQLPIVIDQFYCDK+KCSNQTSAVALSGINYE+IRGTYTVKP
Subjt:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP

Query:  VHFACSDNL
        VHFACSDNL
Subjt:  VHFACSDNL

A0A1S3BAX5 polygalacturonase At1g48100-like1.0e-6566.51Show/hide
Query:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------
        MPSIKPTALRFYGSFN TVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC                        
Subjt:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------

Query:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP
                                                GG GS  NVLFSNIQMSEVQLPIVIDQFYCDK+KCSNQTSAVALSGINYE+IRGTYTVKP
Subjt:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP

Query:  VHFACSDNL
        VHFACSDNL
Subjt:  VHFACSDNL

A0A5A7V181 Phosphatidylinositol 3-kinase, root isoform isoform X21.0e-6566.51Show/hide
Query:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------
        MPSIKPTALRFYGSFN TVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC                        
Subjt:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------

Query:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP
                                                GG GS  NVLFSNIQMSEVQLPIVIDQFYCDK+KCSNQTSAVALSGINYE+IRGTYTVKP
Subjt:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP

Query:  VHFACSDNL
        VHFACSDNL
Subjt:  VHFACSDNL

A0A6J1BS35 polygalacturonase At1g48100-like3.2e-6767.94Show/hide
Query:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------
        MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC                        
Subjt:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------

Query:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP
                                                GGSGS  NVLFSNIQMSEVQLPIVIDQFYCDK+KCSNQTSAVALSGINYEKIRGTYTVKP
Subjt:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP

Query:  VHFACSDNL
        VHFACSDNL
Subjt:  VHFACSDNL

A0A6J1K7Y9 polygalacturonase At1g48100-like1.8e-6566.03Show/hide
Query:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------
        MPSIKPTALRFYGSFN TVTGITIQNSPQCHLKFDNCVGVLVHD SVSSPGDSLNTDGIHLQNSKDVLIHS+SLSC                        
Subjt:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------

Query:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP
                                                GGSGS  NVLFSNIQMSEVQLPIVIDQFYCDK+KC+NQTSAVALSGINYEKIRGTYTVKP
Subjt:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP

Query:  VHFACSDNL
        VHFACSDNL
Subjt:  VHFACSDNL

SwissProt top hitse value%identityAlignment
P35336 Polygalacturonase1.9e-1931.03Show/hide
Query:  PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHS---------------------TSLSC--------
        PTAL FY S +V V  + I+N+ Q H+ FDNCV V   ++ V++P +S NTDGIH+  ++++ I S                       ++C        
Subjt:  PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHS---------------------TSLSC--------

Query:  -----------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSK-CSNQTSAVALSGINYEKIRGTYTVK-PVHF
                                           GGSGSA N+ F N++M  V+ PI+IDQ YCD+ K C  Q+SAV +  + Y+ I+GT      + F
Subjt:  -----------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSK-CSNQTSAVALSGINYEKIRGTYTVK-PVHF

Query:  ACS
         CS
Subjt:  ACS

P43212 Polygalacturonase2.7e-1830.43Show/hide
Query:  KPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGI--------HLQ---------------NSKDVLI--------HSTS
        +PTA++F  S  + + G+ + NSP+ HL F NC GV +  IS+++P DS NTDGI        HLQ                S +++I        H  S
Subjt:  KPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGI--------HLQ---------------NSKDVLI--------HSTS

Query:  LSC---------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYC-DKSKCSNQTSAVALSGINYEKIRGT-YTVKPVH
        +                                   GGSG A ++++ N++M   + PI+I+QFYC   S C NQ SAV +  + Y+ IRGT  T   + 
Subjt:  LSC---------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYC-DKSKCSNQTSAVALSGINYEKIRGT-YTVKPVH

Query:  FACSDNL
          CSD++
Subjt:  FACSDNL

P48978 Polygalacturonase2.1e-1831.77Show/hide
Query:  PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHS---------------------TSLSC--------
        PTA+ F    N+ V  + IQ++ Q H+ F NC+ V    ++V++P DS NTDGIH+ N++++ I S                     T ++C        
Subjt:  PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHS---------------------TSLSC--------

Query:  -----------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCD-KSK-CSNQTSAVALSGINYEKIRGT
                                           GGSGSA N++F N+QM++V  PI+IDQ YCD K+K C  Q SAV +  + Y+ IRGT
Subjt:  -----------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCD-KSK-CSNQTSAVALSGINYEKIRGT

Q8RY29 Polygalacturonase ADPG24.9e-2029.9Show/hide
Query:  PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLI-------------------------------HSTSL
        PTAL FY S ++ V  + ++N+ Q  +  + C  V V ++ V++P DS NTDGIH+ N++++ +                               H  S+
Subjt:  PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLI-------------------------------HSTSL

Query:  SC---------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGT-YTVKPVHFA
                                           GGSG+A N++F NIQM  V+ PI+IDQ YCDKSKC+ + SAV +  + Y  I GT  +   + F 
Subjt:  SC---------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGT-YTVKPVHFA

Query:  CSDN
        CS N
Subjt:  CSDN

Q949Z1 Polygalacturonase At1g481006.8e-3036.19Show/hide
Query:  PSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHST-----------------------------
        P   PT +RF+ S N+ V G+ IQNSPQ H+KFD C GVL+++I +SSP  S NTDGIHL N++ V I+++                             
Subjt:  PSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHST-----------------------------

Query:  -----------SLSC------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVK--
                   S +C                        GG+GS  N+LF NIQM  V   I++DQ+YC    C N+TSAV +  + Y  I+GTY V+  
Subjt:  -----------SLSC------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVK--

Query:  PVHFACSDNL
        P+HFACSD +
Subjt:  PVHFACSDNL

Arabidopsis top hitse value%identityAlignment
AT1G10640.1 Pectin lyase-like superfamily protein1.3e-5754.81Show/hide
Query:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------
        MPSIKPTALRF GSF V VTGITIQNSPQCHLKFD+CVGV+VHDI+VSSPGDS NTDGIHLQN+KDVLIHST+L+C                        
Subjt:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------

Query:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP
                                                GG GS   ++FSNIQ+++VQ+PI I+QFYCD SKC NQTSAVA+ G+ YE+I+GTYTVKP
Subjt:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP

Query:  VHFACSDN
        VHFACSDN
Subjt:  VHFACSDN

AT1G48100.1 Pectin lyase-like superfamily protein4.8e-3136.19Show/hide
Query:  PSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHST-----------------------------
        P   PT +RF+ S N+ V G+ IQNSPQ H+KFD C GVL+++I +SSP  S NTDGIHL N++ V I+++                             
Subjt:  PSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHST-----------------------------

Query:  -----------SLSC------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVK--
                   S +C                        GG+GS  N+LF NIQM  V   I++DQ+YC    C N+TSAV +  + Y  I+GTY V+  
Subjt:  -----------SLSC------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVK--

Query:  PVHFACSDNL
        P+HFACSD +
Subjt:  PVHFACSDNL

AT1G60590.1 Pectin lyase-like superfamily protein1.2e-5855.77Show/hide
Query:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------
        MPSIKPTALRFYGS +VTVTGITIQNSPQCHLKFDNCV VLVHD++VSSPGDS NTDGIHLQN++DV+IH+T+L+C                        
Subjt:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------

Query:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP
                                                GG GS   +LFSNIQ++EVQLPIVIDQFYCD SKC N TSAV++ G+ YEKIRGTYTVKP
Subjt:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP

Query:  VHFACSDN
        VHFACSD+
Subjt:  VHFACSDN

AT3G26610.1 Pectin lyase-like superfamily protein4.8e-3941.04Show/hide
Query:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------
        +P +KPTALRFY S NVTV  I+I NSP CHLKFD+  GV V++I++SSP +S NTDGIHLQN+++V I  ++++C                        
Subjt:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------

Query:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP
                                                GG G   N+ FSNIQ+ +V++PIVIDQ+YCDKSKC NQT AV++SG+ Y  I G++TV+P
Subjt:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP

Query:  VHFACSDNLTGM
        V  ACS+N+  M
Subjt:  VHFACSDNLTGM

AT5G14650.1 Pectin lyase-like superfamily protein9.1e-4646.89Show/hide
Query:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------
        MP  KPTALRFYGS  VTV+GITIQNSPQ HLKFDNC+ + V D + SSPGDS NTDGIHLQNS+D +I+ ++L+C                        
Subjt:  MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSC------------------------

Query:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP
                                                GGSGS   V+FSNIQ+S V  PI+IDQ+YCD   C N+TSAVA+S INY  I+GTYT +P
Subjt:  ----------------------------------------GGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSKCSNQTSAVALSGINYEKIRGTYTVKP

Query:  VHFACSDNL
        V FACSD+L
Subjt:  VHFACSDNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAGCATCAAGCCAACTGCACTTAGGTTTTATGGAAGCTTCAATGTTACGGTCACGGGCATAACAATCCAAAACAGCCCCCAATGCCACCTCAAGTTTGACAACTG
CGTGGGAGTACTGGTGCATGATATCAGCGTCTCATCTCCTGGAGACAGTCTTAATACTGATGGAATTCACTTGCAAAACTCCAAAGACGTTCTAATCCACAGCACCAGTC
TATCTTGTGGTGGGTCGGGCTCTGCATTGAACGTTCTCTTCTCAAACATTCAAATGTCTGAAGTTCAGTTACCAATTGTGATTGACCAATTTTATTGCGACAAATCCAAA
TGCAGCAACCAGACTTCAGCAGTGGCTCTATCAGGAATCAATTATGAGAAAATCAGAGGGACTTACACAGTCAAGCCTGTACACTTTGCCTGTAGCGACAACCTCACCGG
TATGCGGATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAGCATCAAGCCAACTGCACTTAGGTTTTATGGAAGCTTCAATGTTACGGTCACGGGCATAACAATCCAAAACAGCCCCCAATGCCACCTCAAGTTTGACAACTG
CGTGGGAGTACTGGTGCATGATATCAGCGTCTCATCTCCTGGAGACAGTCTTAATACTGATGGAATTCACTTGCAAAACTCCAAAGACGTTCTAATCCACAGCACCAGTC
TATCTTGTGGTGGGTCGGGCTCTGCATTGAACGTTCTCTTCTCAAACATTCAAATGTCTGAAGTTCAGTTACCAATTGTGATTGACCAATTTTATTGCGACAAATCCAAA
TGCAGCAACCAGACTTCAGCAGTGGCTCTATCAGGAATCAATTATGAGAAAATCAGAGGGACTTACACAGTCAAGCCTGTACACTTTGCCTGTAGCGACAACCTCACCGG
TATGCGGATGTAA
Protein sequenceShow/hide protein sequence
MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSCGGSGSALNVLFSNIQMSEVQLPIVIDQFYCDKSK
CSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLTGMRM