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Tan0007190 (gene) of Snake gourd v1 genome

Gene IDTan0007190
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationLG01:78810280..78810576
RNA-Seq ExpressionTan0007190
SyntenyTan0007190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024022975.1 uncharacterized protein LOC112092050 [Morus notabilis]4.2e-1754.05Show/hide
Query:  MLKEHMAKID-------AIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGRELEELPPKVPKIKEPTSIQEQ------
        MLKE++AK +       A++Q+Q AS+RNLENQ+GQLA+ALNNR+ GTLPSDTE PR +G E CKA+ LRSG+ELE    K  K  EP+SIQ +      
Subjt:  MLKEHMAKID-------AIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGRELEELPPKVPKIKEPTSIQEQ------

Query:  VECGKNQVNVE
        V+   NQ +VE
Subjt:  VECGKNQVNVE

XP_030497803.1 uncharacterized protein LOC115713460 [Cannabis sativa]5.4e-1758.7Show/hide
Query:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGRELEELPPKVPKIKEPTSIQEQVECGK
        +++++MAK D ++QSQAAS+RNLE Q+GQLA+ L NR QGTLPSDTENPR  GKE CKAV LRSG+ +E       + KEP+SIQ++ E  K
Subjt:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGRELEELPPKVPKIKEPTSIQEQVECGK

XP_030503898.1 uncharacterized protein LOC115719117 [Cannabis sativa]5.4e-1759.78Show/hide
Query:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGRELEELPPKVPKIKEPTSIQEQVECGK
        +++++MAK DA++QSQAAS+RNLE Q+GQLA+ L NR QGTLPSDTENPR  GKE CKAV LRSG+ +E         KEP+SIQ++ E  K
Subjt:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGRELEELPPKVPKIKEPTSIQEQVECGK

XP_030509134.1 uncharacterized protein LOC115723804 [Cannabis sativa]8.4e-1859.57Show/hide
Query:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGRELEELPPKVPKIKEPTSIQEQVECGKNQ
        +++++MAK DA++QSQAAS+RNLE Q+GQLA+ L NR QGTLPSDT+NPR  GKE CKAV LRSG+ +E         KEP+SIQ++ E  KNQ
Subjt:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGRELEELPPKVPKIKEPTSIQEQVECGKNQ

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]4.2e-1759.78Show/hide
Query:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGRELEELPPKVPKIKEPTSIQEQVECGK
        +++++MAK DA++QSQAAS+RNLE Q+GQLA+ L NR QGTLPSDTENPR  GKE CKAV LRSG+ +E         KEP+SIQ++ E  K
Subjt:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGRELEELPPKVPKIKEPTSIQEQVECGK

TrEMBL top hitse value%identityAlignment
A0A5B6UYR6 Aspartic proteinase CDR1-like6.1e-1463.24Show/hide
Query:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGREL
        M +E+MAKI+ ++QSQAA++R LENQV Q+A+AL++R QGTLPS+TEN R +GKE CKA+ LRSG +L
Subjt:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGREL

A0A5B6VKQ8 Retrovirus-related Pol polyprotein from transposon 17.69.3e-1564.71Show/hide
Query:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGREL
        +LKE+MAK D ++QSQA S+R LENQVGQ++SALN+R QG LPSDT+N R +GKE CKA+  RSG +L
Subjt:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGREL

A0A5B6VWJ0 Retroelement pol polyprotein-like1.9e-1558.43Show/hide
Query:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGRELEELPPKVPKIKEPTSIQEQVE
        +LK +MAK DA++QSQAA+++NLENQVGQLA+ L NR QG LPSDTENPR  GKE CKA+ LRS + +E  P  V   KE  + Q+  E
Subjt:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGRELEELPPKVPKIKEPTSIQEQVE

A0A5B6WQ83 Retrovirus-related Pol polyprotein from transposon 17.61.3e-1360.56Show/hide
Query:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGRELEEL
        +LKE+MAK D ++QSQ AS+R LENQ+GQ+AS L++R QG LPSDTEN R + KE CK + LRSG  L E+
Subjt:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGRELEEL

A0A6J1AB81 uncharacterized protein LOC1104163901.8e-1348.96Show/hide
Query:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTE-NPRGKGKETCKAVQLRSGRELEELPPKVPKIKEPTSIQEQVECGKNQV
        +L ++++K DAI+QSQ AS+RNLE QVGQLA+++NNR QG+LPSDT+ NP  KGKE C+A+ LRSG+E+E +  K   ++      ++ EC + ++
Subjt:  MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTE-NPRGKGKETCKAVQLRSGRELEELPPKVPKIKEPTSIQEQVECGKNQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAAGAGCATATGGCTAAAATCGATGCCATAGTGCAAAGCCAAGCTGCCTCAATCAGAAATTTAGAGAACCAAGTGGGTCAGTTAGCTTCAGCGTTGAATAATAG
AGCCCAAGGTACCTTGCCTAGTGACACTGAGAATCCAAGAGGCAAAGGCAAGGAGACATGTAAAGCAGTGCAACTCCGAAGTGGGAGAGAATTAGAGGAGCTTCCACCCA
AGGTTCCTAAGATAAAAGAGCCCACTTCAATCCAAGAGCAAGTTGAGTGCGGTAAAAATCAAGTCAATGTGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAAGAGCATATGGCTAAAATCGATGCCATAGTGCAAAGCCAAGCTGCCTCAATCAGAAATTTAGAGAACCAAGTGGGTCAGTTAGCTTCAGCGTTGAATAATAG
AGCCCAAGGTACCTTGCCTAGTGACACTGAGAATCCAAGAGGCAAAGGCAAGGAGACATGTAAAGCAGTGCAACTCCGAAGTGGGAGAGAATTAGAGGAGCTTCCACCCA
AGGTTCCTAAGATAAAAGAGCCCACTTCAATCCAAGAGCAAGTTGAGTGCGGTAAAAATCAAGTCAATGTGGAATAA
Protein sequenceShow/hide protein sequence
MLKEHMAKIDAIVQSQAASIRNLENQVGQLASALNNRAQGTLPSDTENPRGKGKETCKAVQLRSGRELEELPPKVPKIKEPTSIQEQVECGKNQVNVE