; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007192 (gene) of Snake gourd v1 genome

Gene IDTan0007192
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSWIM-type domain-containing protein
Genome locationLG01:107613531..107614585
RNA-Seq ExpressionTan0007192
SyntenyTan0007192
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KYP52222.1 hypothetical protein KK1_025963 [Cajanus cajan]7.0e-0645.16Show/hide
Query:  PFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEVRRQRQ
        P +PP++RR P RPK+QRKR + E +    + +Q  T++C KC+N GHN R+CKG+    R+
Subjt:  PFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEVRRQRQ

PPD75718.1 hypothetical protein GOBAR_DD27355 [Gossypium barbadense]2.0e-0549.12Show/hide
Query:  PFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEV
        P  PPVLRRPP +P + R+++  E +  + ++++   +RCSKCK +GHN RSCKGEV
Subjt:  PFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEV

PPD80931.1 hypothetical protein GOBAR_DD22144 [Gossypium barbadense]1.3e-0741.86Show/hide
Query:  EKLDVNVHQYVKNIPA-RFWSRHSFQTYYPFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEV
        +KLDVN+   ++ I   + W+  S     P  PP LRRPP RP + R+++  E +  + + ++   +RCSKCK +GHN RSCKGEV
Subjt:  EKLDVNVHQYVKNIPA-RFWSRHSFQTYYPFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEV

XP_020230608.1 uncharacterized protein LOC109811316 isoform X2 [Cajanus cajan]7.0e-0645.16Show/hide
Query:  PFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEVRRQRQ
        P +PP++RR P RPK+QRKR + E +    + +Q  T++C KC+N GHN R+CKG+    R+
Subjt:  PFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEVRRQRQ

XP_020230609.2 uncharacterized protein LOC109811316 isoform X1 [Cajanus cajan]7.0e-0645.16Show/hide
Query:  PFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEVRRQRQ
        P +PP++RR P RPK+QRKR + E +    + +Q  T++C KC+N GHN R+CKG+    R+
Subjt:  PFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEVRRQRQ

TrEMBL top hitse value%identityAlignment
A0A151SBM5 SWIM-type domain-containing protein3.4e-0645.16Show/hide
Query:  PFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEVRRQRQ
        P +PP++RR P RPK+QRKR + E +    + +Q  T++C KC+N GHN R+CKG+    R+
Subjt:  PFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEVRRQRQ

A0A2N9GBE4 Uncharacterized protein1.2e-0638.54Show/hide
Query:  TEHAFKEAMEDLEKLDVNVHQYVKNIPARFWSRHSFQT---YYPFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSC
        TE  F   M +L+KL    ++Y+  IP   WS     T   Y P  PP+ R  P RPKR R+RD  E        +    ++CS CK +GHNSR+C
Subjt:  TEHAFKEAMEDLEKLDVNVHQYVKNIPARFWSRHSFQT---YYPFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSC

A0A2P5WYT2 SWIM-type domain-containing protein2.9e-0540.51Show/hide
Query:  PPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEVRRQ----RQKRKRTTFMSFNIPSSQ
        PP LRRPP RP + R+++  E +  + + ++   +RCSKCK +GHN RSCKGEV+R     R +++ T       P+ Q
Subjt:  PPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEVRRQ----RQKRKRTTFMSFNIPSSQ

A0A2P5X7R5 Uncharacterized protein2.9e-0549.12Show/hide
Query:  PFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEV
        P  PP LRRPP RP + R+++  E +  + + ++   +RCSKCK +GHN RSCKGEV
Subjt:  PFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEV

A0A2P5XHV5 Uncharacterized protein2.9e-0549.12Show/hide
Query:  PFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEV
        P  PP LRRPP RP + R+++  E +  + + ++   +RCSKCK +GHN RSCKGEV
Subjt:  PFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCAACAGAACATGCTTTCAAAGAAGCTATGGAAGATTTAGAGAAACTTGATGTCAATGTTCATCAATATGTAAAGAACATACCAGCAAGGTTTTGGTCGAGGCA
TAGTTTCCAAACATATTACCCTTTTCAACCACCTGTATTAAGACGACCTCCAAGACGACCAAAAAGACAGCGTAAGAGAGATGTCATTGAAGCTAGACCGAACCAATCTG
TGCAACAACAAACACCTACTGTAAGATGCAGCAAGTGCAAGAACGTTGGGCATAATTCACGATCATGTAAGGGTGAAGTCAGGAGACAAAGACAAAAGAGGAAGAGAACA
ACATTTATGAGTTTCAATATCCCATCTTCGCAGCAAGATGATGACATGGATGTGCAAATCATTTCGTCCCAACGTGGTAATCCATCTTCTAGTGGATCTAAAAGGATGTA
TAGAACTCGATCGAAAGATGCAGCCTTAAAGGGATCTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGACATCAACAGAACATGCTTTCAAAGAAGCTATGGAAGATTTAGAGAAACTTGATGTCAATGTTCATCAATATGTAAAGAACATACCAGCAAGGTTTTGGTCGAGGCA
TAGTTTCCAAACATATTACCCTTTTCAACCACCTGTATTAAGACGACCTCCAAGACGACCAAAAAGACAGCGTAAGAGAGATGTCATTGAAGCTAGACCGAACCAATCTG
TGCAACAACAAACACCTACTGTAAGATGCAGCAAGTGCAAGAACGTTGGGCATAATTCACGATCATGTAAGGGTGAAGTCAGGAGACAAAGACAAAAGAGGAAGAGAACA
ACATTTATGAGTTTCAATATCCCATCTTCGCAGCAAGATGATGACATGGATGTGCAAATCATTTCGTCCCAACGTGGTAATCCATCTTCTAGTGGATCTAAAAGGATGTA
TAGAACTCGATCGAAAGATGCAGCCTTAAAGGGATCTGGATAG
Protein sequenceShow/hide protein sequence
MTSTEHAFKEAMEDLEKLDVNVHQYVKNIPARFWSRHSFQTYYPFQPPVLRRPPRRPKRQRKRDVIEARPNQSVQQQTPTVRCSKCKNVGHNSRSCKGEVRRQRQKRKRT
TFMSFNIPSSQQDDDMDVQIISSQRGNPSSSGSKRMYRTRSKDAALKGSG