; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007229 (gene) of Snake gourd v1 genome

Gene IDTan0007229
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein IDA-like
Genome locationLG04:7877382..7877833
RNA-Seq ExpressionTan0007229
SyntenyTan0007229
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034518.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]6.9e-2368.27Show/hide
Query:  ASSSSSSSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMG-PEMDSDVSNSYQQDNSNYK-TGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDS
        +SSSSSSSSFQ K+    N I IFIL+LLLLSGFSSATRPG TM  P+M           NSNYK T FRY GQTF FLP+GVPIPPS PSDRHNSVVDS
Subjt:  ASSSSSSSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMG-PEMDSDVSNSYQQDNSNYK-TGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDS

Query:  VPHN
        +P N
Subjt:  VPHN
KAG6574002.1 Protein IDA, partial [Cucurbita argyrosperma subsp. sororia]6.3e-2472.41Show/hide
Query:  SLNNPIAIFILVLLLLSGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDSVPHN
        S NNP+AI +L LLLLSGF SATRP K  GPEMDS       Q   NYKTGFRY G+TFSFLPR +PIPPSAPSDRHNSVVDSVP N
Subjt:  SLNNPIAIFILVLLLLSGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDSVPHN
KAG6601330.1 Protein IDA, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2568.32Show/hide
Query:  MASSSSSSSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDSV
        ++SSSSSSSS     LS     AIF+L+LLL+SGF SATRPGKTMG E+  D+S      N NYKTGFRYVGQTFS+LPRGVPIPPS PSDRHNS+VDS+
Subjt:  MASSSSSSSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDSV

Query:  P
        P
Subjt:  P
KAG7032113.1 Protein IDA, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-2368.32Show/hide
Query:  MASSSSSSSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDSV
        M SSSSSSSS      SL+   AIF+L+LLL+SGF SATRPGKTMG E+  D+       N NYKTGFRYVGQTFS+LPRGVPIPPS PSDRHNS+VDS+
Subjt:  MASSSSSSSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDSV

Query:  P
        P
Subjt:  P
TYK09072.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]6.9e-2368.27Show/hide
Query:  ASSSSSSSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMG-PEMDSDVSNSYQQDNSNYK-TGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDS
        +SSSSSSSSFQ K+    N I IFIL+LLLLSGFSSATRPG TM  P+M           NSNYK T FRY GQTF FLP+GVPIPPS PSDRHNSVVDS
Subjt:  ASSSSSSSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMG-PEMDSDVSNSYQQDNSNYK-TGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDS

Query:  VPHN
        +P N
Subjt:  VPHN
TrEMBL top hitse value%identityAlignment
A0A0A0KR07 Uncharacterized protein1.2e-2063.46Show/hide
Query:  MASSSSSSSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMG-PEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDS
        M SSSS +S           PI I +L+LLLLSG SSATRPGKTM   EM+ D+SNS       YKT FRY GQTFSFLP+GVPIPPS PSDRHNSVVDS
Subjt:  MASSSSSSSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMG-PEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDS

Query:  VPHN
        +P N
Subjt:  VPHN
A0A1R3J5S6 Uncharacterized protein1.4e-1348.98Show/hide
Query:  SSSSFQCKRLS----LNNPIAIFILVLLLLSGFSSATRPGKTMGPEMDSDVS-NSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDS
        SS SFQ K++S    L+  I +  L+++LL+G S ATRPG+TM    D ++S  S+++    ++T F+Y GQ F+F P+G PIPPS PS RHNSVVDS
Subjt:  SSSSFQCKRLS----LNNPIAIFILVLLLLSGFSSATRPGKTMGPEMDSDVS-NSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDS
A0A5A7SV51 Putative Membrane lipoprotein3.4e-2368.27Show/hide
Query:  ASSSSSSSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMG-PEMDSDVSNSYQQDNSNYK-TGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDS
        +SSSSSSSSFQ K+    N I IFIL+LLLLSGFSSATRPG TM  P+M           NSNYK T FRY GQTF FLP+GVPIPPS PSDRHNSVVDS
Subjt:  ASSSSSSSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMG-PEMDSDVSNSYQQDNSNYK-TGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDS

Query:  VPHN
        +P N
Subjt:  VPHN
A0A5D2EBI1 Uncharacterized protein1.2e-1251.09Show/hide
Query:  SSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDS
        S    C R  L+N I + + ++ LL+G S ATRPGKT+   +D  VS +       Y+TGFRY GQ F+F P+G+PIPPS PS RHNSVVDS
Subjt:  SSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDS
A0A5D3CCP4 Putative Membrane lipoprotein3.4e-2368.27Show/hide
Query:  ASSSSSSSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMG-PEMDSDVSNSYQQDNSNYK-TGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDS
        +SSSSSSSSFQ K+    N I IFIL+LLLLSGFSSATRPG TM  P+M           NSNYK T FRY GQTF FLP+GVPIPPS PSDRHNSVVDS
Subjt:  ASSSSSSSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMG-PEMDSDVSNSYQQDNSNYK-TGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDS

Query:  VPHN
        +P N
Subjt:  VPHN
SwissProt top hitse value%identityAlignment
Q8LAD7 Protein IDA3.6e-0641.03Show/hide
Query:  FILVLLLLSGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDSVPH
        F+L L   S   +A R G TM  EM  ++     +++             F +LP+GVPIPPSAPS RHNS V+S+PH
Subjt:  FILVLLLLSGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDSVPH
Arabidopsis top hitse value%identityAlignment
AT1G68765.1 Putative membrane lipoprotein2.6e-0741.03Show/hide
Query:  FILVLLLLSGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDSVPH
        F+L L   S   +A R G TM  EM  ++     +++             F +LP+GVPIPPSAPS RHNS V+S+PH
Subjt:  FILVLLLLSGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDSVPH
AT3G18715.1 inflorescence deficient in abscission (IDA)-like 47.7e-0432.22Show/hide
Query:  KRLSLNNPIAIFILVLLLL-------SGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSV
        +RLS+N P A  +L+L L        S FSS+               S  Y+  N ++       G    FLPR +P+P SAPS +HN +
Subjt:  KRLSLNNPIAIFILVLLLL-------SGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSV
AT3G25655.1 inflorescence deficient in abscission (IDA)-like 19.1e-0529.63Show/hide
Query:  IAIFILVLLLLSGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDSVPH
        + ++I+ LL+   +++  R    +GP   S+      +       GF + G+ F    + V +PPS PS RHNSVV+++ H
Subjt:  IAIFILVLLLLSGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDSVPH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCAATGCAAACGCCTCTCTTTAAACAACCCAATTGCCATTTTCATTCTTGTTCTGCTTCTTCTTTCTGGGTTTTCCTC
TGCAACTCGGCCGGGAAAAACGATGGGACCGGAGATGGATTCCGACGTGTCGAATTCTTATCAACAAGACAATTCCAATTACAAGACAGGGTTCCGATATGTCGGACAGA
CCTTCAGCTTTCTCCCCCGAGGCGTTCCGATTCCTCCTTCAGCCCCATCCGACAGGCACAACTCTGTTGTTGACTCTGTTCCTCACAATTGA
mRNA sequenceShow/hide mRNA sequence
CTCAAAGCTTCTCTCTTCAACAACAATGGCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCAATGCAAACGCCTCTCTTTAAACAACCCAATTGCCATTTTCATTCTTGTTC
TGCTTCTTCTTTCTGGGTTTTCCTCTGCAACTCGGCCGGGAAAAACGATGGGACCGGAGATGGATTCCGACGTGTCGAATTCTTATCAACAAGACAATTCCAATTACAAG
ACAGGGTTCCGATATGTCGGACAGACCTTCAGCTTTCTCCCCCGAGGCGTTCCGATTCCTCCTTCAGCCCCATCCGACAGGCACAACTCTGTTGTTGACTCTGTTCCTCA
CAATTGAAAAACAACAACAAAAAAAAAAAGAAAAGAAGCCTTCTTCTTTTAATTCGATTCCTCTGAATATGGAAAATCGAATTTTTCTTTATTGAGATCCGACAGAAATT
ACAGGATTCGTA
Protein sequenceShow/hide protein sequence
MASSSSSSSSFQCKRLSLNNPIAIFILVLLLLSGFSSATRPGKTMGPEMDSDVSNSYQQDNSNYKTGFRYVGQTFSFLPRGVPIPPSAPSDRHNSVVDSVPHN