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Tan0007238 (gene) of Snake gourd v1 genome

Gene IDTan0007238
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCold and drought regulatory protein
Genome locationLG10:34245268..34245753
RNA-Seq ExpressionTan0007238
SyntenyTan0007238
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4933739.1 hypothetical protein JHK87_047741 [Glycine soja]3.8e-0958.97Show/hide
Query:  MSGLLTK------YGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGK---SEHKEGLIDKIKDKIHGDDHDEKGEK
        MSG++ K       GG  ++    EH GEH   HKGEHH EHKGEH G+    EHKEGL+DKIKDKIHGD HD KGEK
Subjt:  MSGLLTK------YGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGK---SEHKEGLIDKIKDKIHGDDHDEKGEK

KAG7028450.1 Protein SRC1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-1059.46Show/hide
Query:  MSGLLTKYGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGKSE-----HKEGLIDKIKDKIHGDDHDEKGEK
        M+G++ K G K+  +I  +HKGEHHE  K EH  EH+ +HG KSE     HKEGL++KIKDKIHGD HDEKGEK
Subjt:  MSGLLTKYGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGKSE-----HKEGLIDKIKDKIHGDDHDEKGEK

XP_008443295.1 PREDICTED: protein SRC1 [Cucumis melo]2.6e-1061.84Show/hide
Query:  MSGLLTKYGGKIQDYIVEEHKGEHHEAHKGEHHEEH-----KGEHGGKSEHKEGLIDKIKDKIHGDD--HDEKGEK
        MSG + K G K+  +I  +HKGEHH+AHKGEHH+EH     K EH G+  HKEG+I+KIKDKIHG D  HDEKGEK
Subjt:  MSGLLTKYGGKIQDYIVEEHKGEHHEAHKGEHHEEH-----KGEHGGKSEHKEGLIDKIKDKIHGDD--HDEKGEK

XP_011652200.1 protein SRC1 [Cucumis sativus]7.7e-1060.53Show/hide
Query:  MSGLLTKYGGKIQDYIVEEHKGEHHEA----HKGEHHEEHK--GEHGGKSEHKEGLIDKIKDKIH-GDDHDEKGEK
        MSG + K G K+  +I  +HKGEHH+A    HKGEHH+EHK   EH G+  HKEG++DKIKDKIH GD H+EKGEK
Subjt:  MSGLLTKYGGKIQDYIVEEHKGEHHEA----HKGEHHEEHK--GEHGGKSEHKEGLIDKIKDKIH-GDDHDEKGEK

XP_038903205.1 protein SRC1 [Benincasa hispida]2.9e-0962.67Show/hide
Query:  MSGLLTKYGGKIQDYIVEEH-KGEHHEAHKGEHHEEHKGEHGGKSE-----HKEGLIDKIKDKIHGDDHDEKGEK
        MSG + K G K+  +I  +H KGEHH+ HKGEHH+EHK +HG   E     HKEGLI+KIKDKIHG DHDEKGEK
Subjt:  MSGLLTKYGGKIQDYIVEEH-KGEHHEAHKGEHHEEHKGEHGGKSE-----HKEGLIDKIKDKIHGDDHDEKGEK

TrEMBL top hitse value%identityAlignment
A0A0B2SHK1 Uncharacterized protein1.9e-0958.97Show/hide
Query:  MSGLLTK------YGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGK---SEHKEGLIDKIKDKIHGDDHDEKGEK
        MSG++ K       GG  ++    EH GEH   HKGEHH EHKGEH G+    EHKEGL+DKIKDKIHGD HD KGEK
Subjt:  MSGLLTK------YGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGK---SEHKEGLIDKIKDKIHGDDHDEKGEK

A0A0R0FQD3 Uncharacterized protein1.9e-0958.97Show/hide
Query:  MSGLLTK------YGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGK---SEHKEGLIDKIKDKIHGDDHDEKGEK
        MSG++ K       GG  ++    EH GEH   HKGEHH EHKGEH G+    EHKEGL+DKIKDKIHGD HD KGEK
Subjt:  MSGLLTK------YGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGK---SEHKEGLIDKIKDKIHGDDHDEKGEK

A0A1B5FL75 Cold and drought regulatory protein (Fragment)3.2e-0961.43Show/hide
Query:  MSGLLTKYGGKIQDYIVEEHKGEHHEA-HKGEHHEEHKGEHGGKSEHKEGLIDKIKDKIHGDDHDEKGEK
        MSG++ K       +  EEHKGEHH+  HKGEHH EHKGEH G  EHKEG +DK+KDKIHGD  + KGEK
Subjt:  MSGLLTKYGGKIQDYIVEEHKGEHHEA-HKGEHHEEHKGEHGGKSEHKEGLIDKIKDKIHGDDHDEKGEK

A0A1S3B8E4 protein SRC11.3e-1061.84Show/hide
Query:  MSGLLTKYGGKIQDYIVEEHKGEHHEAHKGEHHEEH-----KGEHGGKSEHKEGLIDKIKDKIHGDD--HDEKGEK
        MSG + K G K+  +I  +HKGEHH+AHKGEHH+EH     K EH G+  HKEG+I+KIKDKIHG D  HDEKGEK
Subjt:  MSGLLTKYGGKIQDYIVEEHKGEHHEAHKGEHHEEH-----KGEHGGKSEHKEGLIDKIKDKIHGDD--HDEKGEK

A0A5A7UF86 Zinc transporter ZIP61.3e-1061.84Show/hide
Query:  MSGLLTKYGGKIQDYIVEEHKGEHHEAHKGEHHEEH-----KGEHGGKSEHKEGLIDKIKDKIHGDD--HDEKGEK
        MSG + K G K+  +I  +HKGEHH+AHKGEHH+EH     K EH G+  HKEG+I+KIKDKIHG D  HDEKGEK
Subjt:  MSGLLTKYGGKIQDYIVEEHKGEHHEAHKGEHHEEH-----KGEHGGKSEHKEGLIDKIKDKIHGDD--HDEKGEK

SwissProt top hitse value%identityAlignment
O04132 Protein SRC15.0e-1258.97Show/hide
Query:  MSGLLTK------YGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGK---SEHKEGLIDKIKDKIHGDDHDEKGEK
        MSG++ K       GG  ++    EH GEH   HKGEHH EHKGEH G+    EHKEGL+DKIKDKIHGD HD KGEK
Subjt:  MSGLLTK------YGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGK---SEHKEGLIDKIKDKIHGDDHDEKGEK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGACTCCTCACGAAATATGGAGGAAAGATCCAAGACTACATAGTCGAGGAGCACAAGGGCGAGCATCACGAGGCGCACAAAGGCGAGCACCACGAGGAGCACAA
GGGCGAGCACGGCGGCAAGTCGGAGCATAAGGAAGGGCTGATCGATAAGATCAAAGATAAGATCCATGGAGATGATCATGATGAGAAAGGTGAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
CAAACTTAGATCCAAACAAACACCGTAACCATCACCGTCACTAATGTCAGGACTCCTCACGAAATATGGAGGAAAGATCCAAGACTACATAGTCGAGGAGCACAAGGGCG
AGCATCACGAGGCGCACAAAGGCGAGCACCACGAGGAGCACAAGGGCGAGCACGGCGGCAAGTCGGAGCATAAGGAAGGGCTGATCGATAAGATCAAAGATAAGATCCAT
GGAGATGATCATGATGAGAAAGGTGAGAAGTAAAAGGGCGATGGCGAGCACCACCACCACGAAGGCGGTGGCCATAGCAGCAGCAGCCACAGCGATAGCGACTGATCTAT
CATTCCGATCGTGATTTCGCGTCCCTCTGTGTGTGTCTTTAATAAACTTCCCTAATCTCCCTGTTGCTCTTTATATCAGCCTCTGTTTTTCCACTTCTACTCGTTTTTAA
TGTAAAATCCAGTGTGGTGTATAATAAAAGATCCCAATGTTAGGAC
Protein sequenceShow/hide protein sequence
MSGLLTKYGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGKSEHKEGLIDKIKDKIHGDDHDEKGEK