; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007311 (gene) of Snake gourd v1 genome

Gene IDTan0007311
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG10:60285559..60289675
RNA-Seq ExpressionTan0007311
SyntenyTan0007311
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031662.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-6441.31Show/hide
Query:  NVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIM----DSVQEGTSVWDHVLDMMVHFNIAESNGASIDESSS-----RLHSKPFQIV
        N SQ+VRDAYDRW KAND   +Y+LA+MSDIL+KKHE MI  + I       ++EG SV +HVL+ +V+FN+A+ NGA  DE +      +  SK F   
Subjt:  NVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIM----DSVQEGTSVWDHVLDMMVHFNIAESNGASIDESSS-----RLHSKPFQIV

Query:  SCSLEGSKGEANVAMALSR---------------RFDLGQKTMASSSSNPRGKKKNMKKVGKGNRRDKARAVRARKSKTFFEKGKCFHRNEDGHWKRIVR
          ++E +K E N+   L                  FD  ++   SSS    G KK  K  G G  +    A   +       KGKCFH N D HWKR   
Subjt:  SCSLEGSKGEANVAMALSR---------------RFDLGQKTMASSSSNPRGKKKNMKKVGKGNRRDKARAVRARKSKTFFEKGKCFHRNEDGHWKRIVR

Query:  MNDIARRDNAPVGNGEVVSDVAKRHNEALFWQEIYDYSRYGHIYLMHHKSEAHEKFKEFKTEVENQLGKRVKTLRSDR----------------------
                N P         +AK+       ++  DYSRYG++YLM HKSEA EKFK++K EVEN L K++K LRSDR                      
Subjt:  MNDIARRDNAPVGNGEVVSDVAKRHNEALFWQEIYDYSRYGHIYLMHHKSEAHEKFKEFKTEVENQLGKRVKTLRSDR----------------------

Query:  -----------------------------GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVDTSLS
                                     GYPKETRGGLF+DP+E+ VFVSTNT FLEEDH+RDHK +SK+VL+E      +V ++    S+RV +T  S
Subjt:  -----------------------------GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVDTSLS

Query:  SQEGPSQELSMPRRSGRVVIQPDHYMGLAETQVVILDDNCEDP
         Q    Q L MPRRSGRVV QP+ Y+GL ETQVVI DD  EDP
Subjt:  SQEGPSQELSMPRRSGRVVIQPDHYMGLAETQVVILDDNCEDP

KAA0032020.1 gag/pol protein [Cucumis melo var. makuwa]2.3e-5936.99Show/hide
Query:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQ------------------------EGTSVWDHVLDMMVHFNIAESN
        V   N ++ VR+ YD W KAN+KA+ Y+LAS+S +LAKKHE M+TA EIMDS+Q                        EG SV +HVL+M+VHFN+AE N
Subjt:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQ------------------------EGTSVWDHVLDMMVHFNIAESN

Query:  GASIDESSS---RLHSKPFQIVS---------------------------CSLEGSKGEANVAMALSRRFDLGQ----KTMASSSSNPRGKKKNMKKVGK
        GA IDE+S     L S P   +                              ++G KGEANVA + +R+F  G     K+M SSS + + KK   KK G+
Subjt:  GASIDESSS---RLHSKPFQIVS---------------------------CSLEGSKGEANVAMALSRRFDLGQ----KTMASSSSNPRGKKKNMKKVGK

Query:  GNRRDKARAVRARKSKTFFEKGKCFHRNEDGHWKR----------IVRMNDIARRDNAPVGNG-----EVV-------SDVAKRHNEALFWQEIYDYSRY
        GN+ + A A   +K+K    KG CFH N++GHWKR            +   + +R     G+      E+V        +V  R     F     DYSRY
Subjt:  GNRRDKARAVRARKSKTFFEKGKCFHRNEDGHWKR----------IVRMNDIARRDNAPVGNG-----EVV-------SDVAKRHNEALFWQEIYDYSRY

Query:  GHIYLMHHKSEAHEKFKEFKTEVENQL-----------GKRVKTL---------------------------------------------RSDRGYPKET
        G++YLM HKS+A EKFKE+K EVEN L            +R +TL                                                +GYPK T
Subjt:  GHIYLMHHKSEAHEKFKEFKTEVENQL-----------GKRVKTL---------------------------------------------RSDRGYPKET

Query:  RGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDHYMGLAETQ
        RG  FYDPK++KVFVSTN  FLE+DHIR+HKP +K+VL+EL     + + +     S  TRVV    S++    Q L  PRRSGRV   P  YM L ET 
Subjt:  RGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDHYMGLAETQ

Query:  VVILDDNCEDP
         VI D + EDP
Subjt:  VVILDDNCEDP

KAA0037371.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-6036.78Show/hide
Query:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQ------------------------EGTSVWDHVLDMMVHFNIAESN
        VS +N ++ VR+AY+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS+Q                        EG SV +HVL+MM+HFN+AE  
Subjt:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQ------------------------EGTSVWDHVLDMMVHFNIAESN

Query:  GASIDESSSRLHS--------KPFQIVSCSLEGSKGEANVAMALSRRF----DLGQKTMASSSSNPRGKKKNMKKVGKGNRRDKARAVRARKSKTFFEKG
         A IDE+S   ++        + F+ +   ++G KGEANVA + +R+F    + G K M SSS N + KK   KK G+GN+ + A A  ++K+K    KG
Subjt:  GASIDESSSRLHS--------KPFQIVSCSLEGSKGEANVAMALSRRF----DLGQKTMASSSSNPRGKKKNMKKVGKGNRRDKARAVRARKSKTFFEKG

Query:  KCFHRNEDGHWKR----------IVRMNDIARRDNAPVGNG-----EVV-------SDVAKRHNEALFWQEIYDYSRYGHIYLMHHKSEAHEKFKEFKTE
         CFH N++GHWKR            +   + +R     G+      E+V        +V  R     F     DYSRYG++YLM HKSEA EKFKE+K E
Subjt:  KCFHRNEDGHWKR----------IVRMNDIARRDNAPVGNG-----EVV-------SDVAKRHNEALFWQEIYDYSRYGHIYLMHHKSEAHEKFKEFKTE

Query:  VENQL------------------------------------GKRVKT---------------------------LRSDR---------------------
        VEN L                                    G  V+T                           LR  R                     
Subjt:  VENQL------------------------------------GKRVKT---------------------------LRSDR---------------------

Query:  -----GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQ
              YPK TRGG FYDPK++KVFVSTN  FLEED+IR+HKP+SK+VL+EL     + + +     S  TRVV     ++    Q L  PRRSGRV   
Subjt:  -----GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQ

Query:  PDHYMGLAETQVVILDDNCEDP
        P  YM L ET  VI D + EDP
Subjt:  PDHYMGLAETQVVILDDNCEDP

KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]4.9e-6234.6Show/hide
Query:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQ------------------------EGTSVWDHVLDMMVHFNIAESN
        V  +N ++ VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS+Q                        EG SV +HVL+MMVHFN+AE N
Subjt:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQ------------------------EGTSVWDHVLDMMVHFNIAESN

Query:  GASIDESSS---RLHSKPFQIVS---------------------------CSLEGSKGEANVAMALSRRFDLGQ----KTMASSSSNPRGKKKNMKKVGK
        GA IDE+S     L S P   +                              ++G KGEANVA + +R+F  G     K+M SSS N + KK   KK G+
Subjt:  GASIDESSS---RLHSKPFQIVS---------------------------CSLEGSKGEANVAMALSRRFDLGQ----KTMASSSSNPRGKKKNMKKVGK

Query:  GNRRDKARAVRARKSKTFFEKGKCFHRNEDGHWKR----------IVRMNDIARRDNAPVGNG-----EVV-------SDVAKRHNEALFWQEIYDYSRY
        GN+ + A A   +K+K    KG CFH N++GHWKR            +   + +R     G+      E+V        +V  R     F     DYSRY
Subjt:  GNRRDKARAVRARKSKTFFEKGKCFHRNEDGHWKR----------IVRMNDIARRDNAPVGNG-----EVV-------SDVAKRHNEALFWQEIYDYSRY

Query:  GHIYLMHHKSEAHEKFKEFKTEVENQLGKRVKTLRSDR--------------------------------------------------------------
        G++YLM HKSEA EKFKE+K EVEN L K +KT RSDR                                                              
Subjt:  GHIYLMHHKSEAHEKFKEFKTEVENQLGKRVKTLRSDR--------------------------------------------------------------

Query:  -------------------------------------------------------------GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPK
                                                                     GYPK TRGG FYDPK++KVFVSTN  FLEEDHIR+HKP+
Subjt:  -------------------------------------------------------------GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPK

Query:  SKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDHYMGLAETQVVILDDNCEDP
        SK+VL+EL     + + +     S  TRVV    S++    Q L  PRRSGRV   P HYM L ET  VI D + EDP
Subjt:  SKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDHYMGLAETQVVILDDNCEDP

TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa]7.1e-6134.6Show/hide
Query:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQ------------------------EGTSVWDHVLDMMVHFNIAESN
        V  +N +Q VR+ Y+RW K N+K + Y+LAS+S++LAKKHE M+TA+EIMDS+Q                        EG SV +HVL+MMVHFN+AE N
Subjt:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQ------------------------EGTSVWDHVLDMMVHFNIAESN

Query:  GASIDESSSRLHSKPFQIVSCSLEGSKGEANVAMALSRRFDLGQ----KTMASSSSNPRGKKKNMKKVGKGNRRDKARAVRARKSKTFFEKGKCFHRNED
        GA IDE+S               +G KGEANVA + +R+F  G     K+M SSS N + KK   KK G+GN+ + A A   +KSK    KG CFH N++
Subjt:  GASIDESSSRLHSKPFQIVSCSLEGSKGEANVAMALSRRFDLGQ----KTMASSSSNPRGKKKNMKKVGKGNRRDKARAVRARKSKTFFEKGKCFHRNED

Query:  GHWKR---------------IVRMNDIAR-----------RDNAPV---------------GNGE--------VVSD------VAKRHNEALFWQEIYDY
        GHWKR                + +N I R            ++ P+               G G         V SD      V  R     F     DY
Subjt:  GHWKR---------------IVRMNDIAR-----------RDNAPV---------------GNGE--------VVSD------VAKRHNEALFWQEIYDY

Query:  SRYGHIYLMHHKSEAHEKFKEFKTEVENQLGKRVKTLRSDR-----------------------------------------------------------
        SRYG++YLM HKSEA EKFKE+K EVEN L K +KT RSDR                                                           
Subjt:  SRYGHIYLMHHKSEAHEKFKEFKTEVENQLGKRVKTLRSDR-----------------------------------------------------------

Query:  ----------------------------------------------------------------GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDH
                                                                        GYPK TRGG FYDPK++KVFVSTN  FLEEDHIR+H
Subjt:  ----------------------------------------------------------------GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDH

Query:  KPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDHYMGLAETQVVILDDNCEDP
        KP+SK+VL+EL     + + +     S  TRVV    S++    Q L  PRRSGRV   P  YM L ET  VI D + EDP
Subjt:  KPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDHYMGLAETQVVILDDNCEDP

TrEMBL top hitse value%identityAlignment
A0A5A7SKQ7 Gag/pol protein8.7e-6541.31Show/hide
Query:  NVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIM----DSVQEGTSVWDHVLDMMVHFNIAESNGASIDESSS-----RLHSKPFQIV
        N SQ+VRDAYDRW KAND   +Y+LA+MSDIL+KKHE MI  + I       ++EG SV +HVL+ +V+FN+A+ NGA  DE +      +  SK F   
Subjt:  NVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIM----DSVQEGTSVWDHVLDMMVHFNIAESNGASIDESSS-----RLHSKPFQIV

Query:  SCSLEGSKGEANVAMALSR---------------RFDLGQKTMASSSSNPRGKKKNMKKVGKGNRRDKARAVRARKSKTFFEKGKCFHRNEDGHWKRIVR
          ++E +K E N+   L                  FD  ++   SSS    G KK  K  G G  +    A   +       KGKCFH N D HWKR   
Subjt:  SCSLEGSKGEANVAMALSR---------------RFDLGQKTMASSSSNPRGKKKNMKKVGKGNRRDKARAVRARKSKTFFEKGKCFHRNEDGHWKRIVR

Query:  MNDIARRDNAPVGNGEVVSDVAKRHNEALFWQEIYDYSRYGHIYLMHHKSEAHEKFKEFKTEVENQLGKRVKTLRSDR----------------------
                N P         +AK+       ++  DYSRYG++YLM HKSEA EKFK++K EVEN L K++K LRSDR                      
Subjt:  MNDIARRDNAPVGNGEVVSDVAKRHNEALFWQEIYDYSRYGHIYLMHHKSEAHEKFKEFKTEVENQLGKRVKTLRSDR----------------------

Query:  -----------------------------GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVDTSLS
                                     GYPKETRGGLF+DP+E+ VFVSTNT FLEEDH+RDHK +SK+VL+E      +V ++    S+RV +T  S
Subjt:  -----------------------------GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVDTSLS

Query:  SQEGPSQELSMPRRSGRVVIQPDHYMGLAETQVVILDDNCEDP
         Q    Q L MPRRSGRVV QP+ Y+GL ETQVVI DD  EDP
Subjt:  SQEGPSQELSMPRRSGRVVIQPDHYMGLAETQVVILDDNCEDP

A0A5A7T706 Gag/pol protein1.0e-6036.78Show/hide
Query:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQ------------------------EGTSVWDHVLDMMVHFNIAESN
        VS +N ++ VR+AY+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS+Q                        EG SV +HVL+MM+HFN+AE  
Subjt:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQ------------------------EGTSVWDHVLDMMVHFNIAESN

Query:  GASIDESSSRLHS--------KPFQIVSCSLEGSKGEANVAMALSRRF----DLGQKTMASSSSNPRGKKKNMKKVGKGNRRDKARAVRARKSKTFFEKG
         A IDE+S   ++        + F+ +   ++G KGEANVA + +R+F    + G K M SSS N + KK   KK G+GN+ + A A  ++K+K    KG
Subjt:  GASIDESSSRLHS--------KPFQIVSCSLEGSKGEANVAMALSRRF----DLGQKTMASSSSNPRGKKKNMKKVGKGNRRDKARAVRARKSKTFFEKG

Query:  KCFHRNEDGHWKR----------IVRMNDIARRDNAPVGNG-----EVV-------SDVAKRHNEALFWQEIYDYSRYGHIYLMHHKSEAHEKFKEFKTE
         CFH N++GHWKR            +   + +R     G+      E+V        +V  R     F     DYSRYG++YLM HKSEA EKFKE+K E
Subjt:  KCFHRNEDGHWKR----------IVRMNDIARRDNAPVGNG-----EVV-------SDVAKRHNEALFWQEIYDYSRYGHIYLMHHKSEAHEKFKEFKTE

Query:  VENQL------------------------------------GKRVKT---------------------------LRSDR---------------------
        VEN L                                    G  V+T                           LR  R                     
Subjt:  VENQL------------------------------------GKRVKT---------------------------LRSDR---------------------

Query:  -----GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQ
              YPK TRGG FYDPK++KVFVSTN  FLEED+IR+HKP+SK+VL+EL     + + +     S  TRVV     ++    Q L  PRRSGRV   
Subjt:  -----GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQ

Query:  PDHYMGLAETQVVILDDNCEDP
        P  YM L ET  VI D + EDP
Subjt:  PDHYMGLAETQVVILDDNCEDP

A0A5A7U869 Gag/pol protein2.4e-6234.6Show/hide
Query:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQ------------------------EGTSVWDHVLDMMVHFNIAESN
        V  +N ++ VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS+Q                        EG SV +HVL+MMVHFN+AE N
Subjt:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQ------------------------EGTSVWDHVLDMMVHFNIAESN

Query:  GASIDESSS---RLHSKPFQIVS---------------------------CSLEGSKGEANVAMALSRRFDLGQ----KTMASSSSNPRGKKKNMKKVGK
        GA IDE+S     L S P   +                              ++G KGEANVA + +R+F  G     K+M SSS N + KK   KK G+
Subjt:  GASIDESSS---RLHSKPFQIVS---------------------------CSLEGSKGEANVAMALSRRFDLGQ----KTMASSSSNPRGKKKNMKKVGK

Query:  GNRRDKARAVRARKSKTFFEKGKCFHRNEDGHWKR----------IVRMNDIARRDNAPVGNG-----EVV-------SDVAKRHNEALFWQEIYDYSRY
        GN+ + A A   +K+K    KG CFH N++GHWKR            +   + +R     G+      E+V        +V  R     F     DYSRY
Subjt:  GNRRDKARAVRARKSKTFFEKGKCFHRNEDGHWKR----------IVRMNDIARRDNAPVGNG-----EVV-------SDVAKRHNEALFWQEIYDYSRY

Query:  GHIYLMHHKSEAHEKFKEFKTEVENQLGKRVKTLRSDR--------------------------------------------------------------
        G++YLM HKSEA EKFKE+K EVEN L K +KT RSDR                                                              
Subjt:  GHIYLMHHKSEAHEKFKEFKTEVENQLGKRVKTLRSDR--------------------------------------------------------------

Query:  -------------------------------------------------------------GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPK
                                                                     GYPK TRGG FYDPK++KVFVSTN  FLEEDHIR+HKP+
Subjt:  -------------------------------------------------------------GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPK

Query:  SKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDHYMGLAETQVVILDDNCEDP
        SK+VL+EL     + + +     S  TRVV    S++    Q L  PRRSGRV   P HYM L ET  VI D + EDP
Subjt:  SKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDHYMGLAETQVVILDDNCEDP

A0A5A7UKD1 Gag-pol fusion protein1.1e-5937.47Show/hide
Query:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQEGTSVWDHVLD--MMVHFNIAESNGASIDESSSRLHSKPFQIVS--
        V  +N ++ +R+ Y+RW KAN+KA+ Y+L S+S++LAKKHE ++TA+EIMDS+QE   +   V+D    V F +     + +   S+ + +K    ++  
Subjt:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQEGTSVWDHVLD--MMVHFNIAESNGASIDESSSRLHSKPFQIVS--

Query:  ----------CSLEGSKGEANVAMA---LSRRFDLGQKTMASSSSNPRGKKKNMKKVGKGNRRDKARAVRARKSKTFFEKGKCFHRNEDGHWKR------
                    ++G KGE NVA +     RR   G K+M SSS N + KKKN    G+GN+ + A A   +K+K    KG CFH N++GHWKR      
Subjt:  ----------CSLEGSKGEANVAMA---LSRRFDLGQKTMASSSSNPRGKKKNMKKVGKGNRRDKARAVRARKSKTFFEKGKCFHRNEDGHWKR------

Query:  ----IVRMNDIARRDNAPVGNG-----EVV-------SDVAKRHNEALFWQEIYDYSRYGHIYLMHHKSEAHEKFKEFKTEVENQLGKRVKTLRSDR---
             V+   + +R     G+      E+V        +V  R     F     DYSRYG++YLM HKSEA EKFKE+K EVEN L K +K  RSDR   
Subjt:  ----IVRMNDIARRDNAPVGNG-----EVV-------SDVAKRHNEALFWQEIYDYSRYGHIYLMHHKSEAHEKFKEFKTEVENQLGKRVKTLRSDR---

Query:  --------------------------------------------------GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPKSKVVLSELDGT
                                                          GYPK TRGG FYDPK++K+FVS N  FLEEDHIR+HKP+SK+VL+EL   
Subjt:  --------------------------------------------------GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDHKPKSKVVLSELDGT

Query:  IAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDHYMGLAETQVVILDDNCEDP
          + + +     S  TRVV    S++    Q L  PRRSGRV   P  YM L ET  VI D + EDP
Subjt:  IAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDHYMGLAETQVVILDDNCEDP

A0A5D3BHG7 Gag/pol protein3.4e-6134.6Show/hide
Query:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQ------------------------EGTSVWDHVLDMMVHFNIAESN
        V  +N +Q VR+ Y+RW K N+K + Y+LAS+S++LAKKHE M+TA+EIMDS+Q                        EG SV +HVL+MMVHFN+AE N
Subjt:  VSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSVQ------------------------EGTSVWDHVLDMMVHFNIAESN

Query:  GASIDESSSRLHSKPFQIVSCSLEGSKGEANVAMALSRRFDLGQ----KTMASSSSNPRGKKKNMKKVGKGNRRDKARAVRARKSKTFFEKGKCFHRNED
        GA IDE+S               +G KGEANVA + +R+F  G     K+M SSS N + KK   KK G+GN+ + A A   +KSK    KG CFH N++
Subjt:  GASIDESSSRLHSKPFQIVSCSLEGSKGEANVAMALSRRFDLGQ----KTMASSSSNPRGKKKNMKKVGKGNRRDKARAVRARKSKTFFEKGKCFHRNED

Query:  GHWKR---------------IVRMNDIAR-----------RDNAPV---------------GNGE--------VVSD------VAKRHNEALFWQEIYDY
        GHWKR                + +N I R            ++ P+               G G         V SD      V  R     F     DY
Subjt:  GHWKR---------------IVRMNDIAR-----------RDNAPV---------------GNGE--------VVSD------VAKRHNEALFWQEIYDY

Query:  SRYGHIYLMHHKSEAHEKFKEFKTEVENQLGKRVKTLRSDR-----------------------------------------------------------
        SRYG++YLM HKSEA EKFKE+K EVEN L K +KT RSDR                                                           
Subjt:  SRYGHIYLMHHKSEAHEKFKEFKTEVENQLGKRVKTLRSDR-----------------------------------------------------------

Query:  ----------------------------------------------------------------GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDH
                                                                        GYPK TRGG FYDPK++KVFVSTN  FLEEDHIR+H
Subjt:  ----------------------------------------------------------------GYPKETRGGLFYDPKEDKVFVSTNTIFLEEDHIRDH

Query:  KPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDHYMGLAETQVVILDDNCEDP
        KP+SK+VL+EL     + + +     S  TRVV    S++    Q L  PRRSGRV   P  YM L ET  VI D + EDP
Subjt:  KPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDHYMGLAETQVVILDDNCEDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGCAACGGCTGTTCATTAGCGTTAACGCCATCGCCGCGCTTCCTCAGCGTAACAACGAGGAGGCGTTGCACAACGCTCGACAGAAGACGACAAAAGCAGCGTT
GCAACGCTGTTATCAACGTTGCAACGCCGAAGCCACTTCACGCAAGGCAGCAACGGGCAGAAACGTGTCAGGCTCGAATGTGTCACAAAATGTTCGTGATGCATATGATC
GATGGATCAAGGCCAATGATAAGGCCAAGGTCTACATGCTGGCAAGTATGTCTGACATATTAGCCAAGAAGCATGAGGGCATGATTACCGCTAAGGAAATCATGGATTCT
GTGCAGGAGGGTACATCTGTTTGGGATCATGTCCTGGATATGATGGTGCACTTTAACATTGCGGAGTCGAATGGTGCTTCCATCGATGAGTCGAGCAGTCGACTTCATTC
GAAACCCTTCCAGATAGTTTCCTGCAGTTTAGAAGGATCGAAAGGTGAGGCAAATGTTGCGATGGCGTTATCACGGAGGTTCGACCTGGGACAAAAAACGATGGCTTCAT
CTTCTTCTAACCCGAGAGGTAAGAAGAAGAACATGAAGAAGGTTGGTAAAGGAAATAGGCGAGACAAAGCGCGCGCCGTAAGGGCAAGAAAATCAAAGACGTTCTTTGAG
AAAGGAAAGTGTTTCCACCGCAACGAAGACGGGCATTGGAAGCGAATCGTCAGAATGAATGATATAGCAAGGAGAGATAACGCTCCAGTTGGAAATGGAGAAGTCGTCTC
AGATGTAGCCAAGAGGCACAATGAAGCTTTATTTTGGCAAGAAATATATGATTATTCCAGATATGGGCATATTTACCTAATGCACCACAAGTCAGAAGCACATGAAAAGT
TCAAGGAATTCAAGACTGAGGTTGAAAATCAATTAGGTAAAAGAGTTAAAACACTTCGATCGGATCGAGGATATCCAAAAGAAACAAGAGGTGGTTTATTCTATGATCCT
AAGGAAGATAAGGTCTTTGTGTCGACAAATACCATTTTCTTGGAGGAAGACCACATAAGGGACCACAAACCAAAAAGTAAGGTAGTGTTGAGTGAGTTAGACGGAACAAT
AGCAAAGGTTGCTAATAAGAACACTAGTACGTCAACAAGAGTTGTTGATACTAGTTTGTCTAGTCAAGAGGGTCCATCTCAAGAGTTGAGTATGCCTCGACGTAGTGGGA
GGGTTGTGATACAGCCTGACCATTACATGGGTTTAGCTGAAACCCAAGTTGTTATACTAGATGACAACTGCGAGGATCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTGCAACGGCTGTTCATTAGCGTTAACGCCATCGCCGCGCTTCCTCAGCGTAACAACGAGGAGGCGTTGCACAACGCTCGACAGAAGACGACAAAAGCAGCGTT
GCAACGCTGTTATCAACGTTGCAACGCCGAAGCCACTTCACGCAAGGCAGCAACGGGCAGAAACGTGTCAGGCTCGAATGTGTCACAAAATGTTCGTGATGCATATGATC
GATGGATCAAGGCCAATGATAAGGCCAAGGTCTACATGCTGGCAAGTATGTCTGACATATTAGCCAAGAAGCATGAGGGCATGATTACCGCTAAGGAAATCATGGATTCT
GTGCAGGAGGGTACATCTGTTTGGGATCATGTCCTGGATATGATGGTGCACTTTAACATTGCGGAGTCGAATGGTGCTTCCATCGATGAGTCGAGCAGTCGACTTCATTC
GAAACCCTTCCAGATAGTTTCCTGCAGTTTAGAAGGATCGAAAGGTGAGGCAAATGTTGCGATGGCGTTATCACGGAGGTTCGACCTGGGACAAAAAACGATGGCTTCAT
CTTCTTCTAACCCGAGAGGTAAGAAGAAGAACATGAAGAAGGTTGGTAAAGGAAATAGGCGAGACAAAGCGCGCGCCGTAAGGGCAAGAAAATCAAAGACGTTCTTTGAG
AAAGGAAAGTGTTTCCACCGCAACGAAGACGGGCATTGGAAGCGAATCGTCAGAATGAATGATATAGCAAGGAGAGATAACGCTCCAGTTGGAAATGGAGAAGTCGTCTC
AGATGTAGCCAAGAGGCACAATGAAGCTTTATTTTGGCAAGAAATATATGATTATTCCAGATATGGGCATATTTACCTAATGCACCACAAGTCAGAAGCACATGAAAAGT
TCAAGGAATTCAAGACTGAGGTTGAAAATCAATTAGGTAAAAGAGTTAAAACACTTCGATCGGATCGAGGATATCCAAAAGAAACAAGAGGTGGTTTATTCTATGATCCT
AAGGAAGATAAGGTCTTTGTGTCGACAAATACCATTTTCTTGGAGGAAGACCACATAAGGGACCACAAACCAAAAAGTAAGGTAGTGTTGAGTGAGTTAGACGGAACAAT
AGCAAAGGTTGCTAATAAGAACACTAGTACGTCAACAAGAGTTGTTGATACTAGTTTGTCTAGTCAAGAGGGTCCATCTCAAGAGTTGAGTATGCCTCGACGTAGTGGGA
GGGTTGTGATACAGCCTGACCATTACATGGGTTTAGCTGAAACCCAAGTTGTTATACTAGATGACAACTGCGAGGATCCATAG
Protein sequenceShow/hide protein sequence
MALQRLFISVNAIAALPQRNNEEALHNARQKTTKAALQRCYQRCNAEATSRKAATGRNVSGSNVSQNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDS
VQEGTSVWDHVLDMMVHFNIAESNGASIDESSSRLHSKPFQIVSCSLEGSKGEANVAMALSRRFDLGQKTMASSSSNPRGKKKNMKKVGKGNRRDKARAVRARKSKTFFE
KGKCFHRNEDGHWKRIVRMNDIARRDNAPVGNGEVVSDVAKRHNEALFWQEIYDYSRYGHIYLMHHKSEAHEKFKEFKTEVENQLGKRVKTLRSDRGYPKETRGGLFYDP
KEDKVFVSTNTIFLEEDHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDHYMGLAETQVVILDDNCEDP