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Tan0007365 (gene) of Snake gourd v1 genome

Gene IDTan0007365
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSWIM-type domain-containing protein
Genome locationLG07:70408346..70410275
RNA-Seq ExpressionTan0007365
SyntenyTan0007365
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN74432.1 hypothetical protein VITISV_040275 [Vitis vinifera]4.2e-0631.43Show/hide
Query:  ILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQVPSCVEL
        +LCY  G I + PNG+ YS PP K I+    + YDEL+  +           +L + +R P   A  S  +  + + +D DV+ M    T S   S +E+
Subjt:  ILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQVPSCVEL

Query:  YIKRS
        Y++ S
Subjt:  YIKRS

PWA56593.1 DNA-binding WRKY [Artemisia annua]1.4e-0626.81Show/hide
Query:  MGEKVILILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQ
        M  K +++LCY  G I +GP G+ Y++PPSK I  Q G  ++EL  +++           +++  R P+    K  +++P+ + +D+D++ M  +    Q
Subjt:  MGEKVILILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQ

Query:  VPSCVELYI-----------KRSQTFGLLIPTTNLERE
          S ++LY+           +R+Q   L+    +L RE
Subjt:  VPSCVELYI-----------KRSQTFGLLIPTTNLERE

PWA74118.1 MuDR family transposase [Artemisia annua]3.2e-0630.28Show/hide
Query:  MGEKVILILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQ
        M  K + +LCY +G I +GP G+ Y++PPSK I  Q G  Y++L  +++           +++  R P   A K  +++ + + ++NDV+ M  + T  +
Subjt:  MGEKVILILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQ

Query:  VPSCVELYI
          S ++LYI
Subjt:  VPSCVELYI

RVX08500.1 hypothetical protein CK203_014195 [Vitis vinifera]4.9e-0729.91Show/hide
Query:  ILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPA--NNAPKSTRFVPMLLQNDNDVKFMTTIATHSQVPSCV
        +LCYT G I +   G+ Y+RPP KG+       +DEL+ ++    +      +L + +R P    N   +  +VP+ +++D DV  M T+   S  P+ +
Subjt:  ILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPA--NNAPKSTRFVPMLLQNDNDVKFMTTIATHSQVPSCV

Query:  ELYIKRS
        E+Y + S
Subjt:  ELYIKRS

XP_034698754.1 uncharacterized protein LOC117924268 [Vitis riparia]3.2e-0631.43Show/hide
Query:  ILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQVPSCVEL
        +LCY  G I + PNG+ YS PP K I+    + YDEL+  +           +L + +R P   A  S  +  + + +D DV+ M    T S   S +E+
Subjt:  ILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQVPSCVEL

Query:  YIKRS
        Y++ S
Subjt:  YIKRS

TrEMBL top hitse value%identityAlignment
A0A2U1M5P5 DNA-binding WRKY6.9e-0726.81Show/hide
Query:  MGEKVILILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQ
        M  K +++LCY  G I +GP G+ Y++PPSK I  Q G  ++EL  +++           +++  R P+    K  +++P+ + +D+D++ M  +    Q
Subjt:  MGEKVILILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQ

Query:  VPSCVELYI-----------KRSQTFGLLIPTTNLERE
          S ++LY+           +R+Q   L+    +L RE
Subjt:  VPSCVELYI-----------KRSQTFGLLIPTTNLERE

A0A2U1NKX3 MuDR family transposase1.5e-0630.28Show/hide
Query:  MGEKVILILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQ
        M  K + +LCY +G I +GP G+ Y++PPSK I  Q G  Y++L  +++           +++  R P   A K  +++ + + ++NDV+ M  + T  +
Subjt:  MGEKVILILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQ

Query:  VPSCVELYI
          S ++LYI
Subjt:  VPSCVELYI

A0A2U1Q3T2 MuDR family transposase3.4e-0629.66Show/hide
Query:  MGEKVILILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQ
        M  K + +LCY +G I +GP G+ Y++ PSK I  Q G  YDEL  +++           ++I  R P   A K  +++ + + ++NDV  M  + T  +
Subjt:  MGEKVILILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQ

Query:  VPSCVELYIKRSQTFGLLIPTTNLERESNASELLSTRNRQNADKE
          S ++LYI+        +  T   RE  A     T+N    D+E
Subjt:  VPSCVELYIKRSQTFGLLIPTTNLERESNASELLSTRNRQNADKE

A0A438JHT2 Uncharacterized protein2.4e-0729.91Show/hide
Query:  ILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPA--NNAPKSTRFVPMLLQNDNDVKFMTTIATHSQVPSCV
        +LCYT G I +   G+ Y+RPP KG+       +DEL+ ++    +      +L + +R P    N   +  +VP+ +++D DV  M T+   S  P+ +
Subjt:  ILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPA--NNAPKSTRFVPMLLQNDNDVKFMTTIATHSQVPSCV

Query:  ELYIKRS
        E+Y + S
Subjt:  ELYIKRS

A5BD12 SWIM-type domain-containing protein2.0e-0631.43Show/hide
Query:  ILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQVPSCVEL
        +LCY  G I + PNG+ YS PP K I+    + YDEL+  +           +L + +R P   A  S  +  + + +D DV+ M    T S   S +E+
Subjt:  ILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQVPSCVEL

Query:  YIKRS
        Y++ S
Subjt:  YIKRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAGAAGGTTATACTCATATTGTGCTATACAGAGGGAATGATTAACAATGGACCAAATGGTATATCGTATAGTAGACCTCCATCGAAAGGAATTATATTTCAAGA
AGGCAGGGGATATGATGAATTGAAAAAGAGGATGAATGAGGAATTCGACACTCTAGGAGGGCTTGGAGAGTTGGAAATAACTTATCGATGTCCTGCAAATAATGCACCAA
AGTCTACTCGATTTGTGCCTATGCTCCTTCAAAATGATAATGATGTGAAGTTTATGACCACTATTGCCACTCACTCACAAGTTCCTAGTTGTGTGGAGTTGTATATTAAG
AGATCTCAAACCTTTGGATTACTAATTCCAACCACAAATCTAGAGAGAGAGTCAAACGCAAGTGAATTATTAAGTACTCGTAATCGGCAGAATGCAGACAAAGAATTTCC
TAGATGGATGAACATCTTTAAAACCTCTGGGTCTTCCTTACACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAGAAGGTTATACTCATATTGTGCTATACAGAGGGAATGATTAACAATGGACCAAATGGTATATCGTATAGTAGACCTCCATCGAAAGGAATTATATTTCAAGA
AGGCAGGGGATATGATGAATTGAAAAAGAGGATGAATGAGGAATTCGACACTCTAGGAGGGCTTGGAGAGTTGGAAATAACTTATCGATGTCCTGCAAATAATGCACCAA
AGTCTACTCGATTTGTGCCTATGCTCCTTCAAAATGATAATGATGTGAAGTTTATGACCACTATTGCCACTCACTCACAAGTTCCTAGTTGTGTGGAGTTGTATATTAAG
AGATCTCAAACCTTTGGATTACTAATTCCAACCACAAATCTAGAGAGAGAGTCAAACGCAAGTGAATTATTAAGTACTCGTAATCGGCAGAATGCAGACAAAGAATTTCC
TAGATGGATGAACATCTTTAAAACCTCTGGGTCTTCCTTACACCATTAG
Protein sequenceShow/hide protein sequence
MGEKVILILCYTEGMINNGPNGISYSRPPSKGIIFQEGRGYDELKKRMNEEFDTLGGLGELEITYRCPANNAPKSTRFVPMLLQNDNDVKFMTTIATHSQVPSCVELYIK
RSQTFGLLIPTTNLERESNASELLSTRNRQNADKEFPRWMNIFKTSGSSLHH