; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007366 (gene) of Snake gourd v1 genome

Gene IDTan0007366
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationLG04:3243351..3246362
RNA-Seq ExpressionTan0007366
SyntenyTan0007366
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143608.1 probable RNA-binding protein ARP1 isoform X1 [Cucumis sativus]1.7e-12692.09Show/hide
Query:  SNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR-GSRSA
        S NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDK+TGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR GSRSA
Subjt:  SNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR-GSRSA

Query:  SATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANALMPM
        SATPP APQPGSN GGPRTTSAA+  GNHVQWYYPAGTHPTPFHHQPH Q VPFYGYSPSP TYIATDISYNHKLGYMNGHYTQMYPGQAMVGAN LMPM
Subjt:  SATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANALMPM

Query:  YPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGG
        YP+YHYHQSHAMGMPAHIFPPSPT AGPF AVPP+SIMSKP +V PNPGTVGG
Subjt:  YPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGG

XP_008445852.2 PREDICTED: probable RNA-binding protein ARP1 isoform X1 [Cucumis melo]5.5e-12589.02Show/hide
Query:  MTMM------SNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
        MTMM      + NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDK+TGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
Subjt:  MTMM------SNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL

Query:  GARR-GSRSASATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQ-
        GARR GSRSASATPP APQPGSNGGGPRTT+AA+  GNHVQWYYPAGTHPTPFHHQPH Q VPFYGYSPSP TYIATDISYNHKLGY+NGHYTQMYPGQ 
Subjt:  GARR-GSRSASATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQ-

Query:  AMVGANALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGG
        AMVGAN LMPMYP+YHYHQSHAMGMPAHIFPPSPT AGPF AVPP+SIMSKP +V PNPGTVGG
Subjt:  AMVGANALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGG

XP_011654915.1 probable RNA-binding protein ARP1 isoform X2 [Cucumis sativus]1.0e-12391.94Show/hide
Query:  SNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR-GSRSA
        S NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDK+TGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR GSRSA
Subjt:  SNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR-GSRSA

Query:  SATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANALMPM
        SATPP APQPGSN GGPRTTSAA+  GNHVQWYYPAGTHPTPFHHQPH Q VPFYGYSPSP TYIATDISYNHKLGYMNGHYTQMYPGQAMVGAN LMPM
Subjt:  SATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANALMPM

Query:  YPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNP
        YP+YHYHQSHAMGMPAHIFPPSPT AGPF AVPP+SIMSKP +V PNP
Subjt:  YPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNP

XP_038891949.1 probable RNA-binding protein ARP1 isoform X1 [Benincasa hispida]8.7e-13191.42Show/hide
Query:  MTMMS-------NNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
        MTMMS       NNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDK+TGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
Subjt:  MTMMS-------NNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS

Query:  LGARR-GSRSASATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQ
        LGARR GSRSASATPP APQPGSNGGGPRTTSA +  GNHVQWYYPAGTHPTPFHHQPH Q VPFYGYSPSP TYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  LGARR-GSRSASATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGGGFRG
        AMVGAN LMPMYP+YHYHQSHAMGMPAHIFPPSPT AGPF AVPPSSIMSKPASV PNPGTVGGG RG
Subjt:  AMVGANALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGGGFRG

XP_038891950.1 probable RNA-binding protein ARP1 isoform X2 [Benincasa hispida]2.2e-12691.51Show/hide
Query:  MTMMS-------NNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
        MTMMS       NNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDK+TGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
Subjt:  MTMMS-------NNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS

Query:  LGARR-GSRSASATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQ
        LGARR GSRSASATPP APQPGSNGGGPRTTSA +  GNHVQWYYPAGTHPTPFHHQPH Q VPFYGYSPSP TYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  LGARR-GSRSASATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNP
        AMVGAN LMPMYP+YHYHQSHAMGMPAHIFPPSPT AGPF AVPPSSIMSKPASV PNP
Subjt:  AMVGANALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNP

TrEMBL top hitse value%identityAlignment
A0A0A0KNL6 RRM domain-containing protein8.2e-12792.09Show/hide
Query:  SNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR-GSRSA
        S NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDK+TGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR GSRSA
Subjt:  SNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR-GSRSA

Query:  SATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANALMPM
        SATPP APQPGSN GGPRTTSAA+  GNHVQWYYPAGTHPTPFHHQPH Q VPFYGYSPSP TYIATDISYNHKLGYMNGHYTQMYPGQAMVGAN LMPM
Subjt:  SATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANALMPM

Query:  YPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGG
        YP+YHYHQSHAMGMPAHIFPPSPT AGPF AVPP+SIMSKP +V PNPGTVGG
Subjt:  YPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGG

A0A1S3BEI0 probable RNA-binding protein ARP1 isoform X12.6e-12589.02Show/hide
Query:  MTMM------SNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
        MTMM      + NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDK+TGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
Subjt:  MTMM------SNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL

Query:  GARR-GSRSASATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQ-
        GARR GSRSASATPP APQPGSNGGGPRTT+AA+  GNHVQWYYPAGTHPTPFHHQPH Q VPFYGYSPSP TYIATDISYNHKLGY+NGHYTQMYPGQ 
Subjt:  GARR-GSRSASATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQ-

Query:  AMVGANALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGG
        AMVGAN LMPMYP+YHYHQSHAMGMPAHIFPPSPT AGPF AVPP+SIMSKP +V PNPGTVGG
Subjt:  AMVGANALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGG

A0A5A7SY01 Putative RNA-binding protein ARP1 isoform X11.2e-12288.46Show/hide
Query:  MTMM------SNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
        MTMM      + NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDK+TGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
Subjt:  MTMM------SNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL

Query:  GARR-GSRSASATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQ-
        GARR GSRSASATPP APQPGSNGGGPRTT+AA+  GNHVQWYYPAGTHPTPFHHQPH Q VPFYGYSPSP TYIATDISYNHKLGY+NGHYTQMYPGQ 
Subjt:  GARR-GSRSASATPPLAPQPGSNGGGPRTTSAAS--GNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQ-

Query:  AMVGANALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPG
        AMVG N LMPMYP+YHYHQSHAMGMPAHIFPPSPT AGPF AVPP+SIMSKP +V PNPG
Subjt:  AMVGANALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPG

A0A6J1FUE8 probable RNA-binding protein ARP1 isoform X11.2e-12290.51Show/hide
Query:  MMSNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRS
        M +NNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDK+TGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRS
Subjt:  MMSNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRS

Query:  ASATPPLAPQ-PGSNGGGPRTTSAASGNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANALMPM
        ASATPP APQ PGSNGGGPRTTSA SGNHVQWYYPAGT+PT F HQPH QAVPFYGYSPSP TYIATDISYNHK+GYMNGHY Q+YPGQAMVGAN LMPM
Subjt:  ASATPPLAPQ-PGSNGGGPRTTSAASGNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANALMPM

Query:  YPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGG
        YP+YHYHQSHAMGMPAHI+PPSPTA     AVPPSSIMSKPASVAP PG VGG
Subjt:  YPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGG

A0A6J1KJN8 probable RNA-binding protein ARP1 isoform X39.4e-12390.73Show/hide
Query:  LFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSASATPPL
        +FGDTTLTKVFVGGLAWETPKEAMRDHFEKFG+ILEAVII+DK+TGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR SRSASATPP 
Subjt:  LFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSASATPPL

Query:  APQPGSNGGGPRTTSAASGNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNH-KLGYMN-GHYTQMYPGQAMVGANALMPMYPVYHY
         PQPGSNGG PRTTSAA+GNHVQWYYPAGTHPT FHHQPH QAVPFYGYSPSPTTYIATDISYNH K+GYMN G Y Q+YPGQAMVGAN LMPMYPVYHY
Subjt:  APQPGSNGGGPRTTSAASGNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNH-KLGYMN-GHYTQMYPGQAMVGANALMPMYPVYHY

Query:  HQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGGG
        HQS AMGMPAHIFPPSPTAAGPF AVPP+SIMSKPASV PNPG VGGG
Subjt:  HQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGGG

SwissProt top hitse value%identityAlignment
Q5ZJX4 RNA-binding protein 383.1e-2257.65Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q6GQD3 RNA-binding protein 24-A4.0e-2257.65Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q6P8A7 RNA-binding protein 244.0e-2257.65Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9I8B3 RNA-binding protein 24-B4.0e-2257.65Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9M1S3 Probable RNA-binding protein ARP14.1e-5950.36Show/hide
Query:  MTMMSNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGS
        MT  +N  G FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDK+T RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R   
Subjt:  MTMMSNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGS

Query:  RSASATPPLAPQPGSNGGGPRTTSAASGNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLG-----YMNGHYTQMYP-------
             +P   P+ G+     R T    GNH QWYYP+G      H Q + QAVPFYGY   P+ Y+A ++++N K+G     YMNG+Y QM P       
Subjt:  RSASATPPLAPQPGSNGGGPRTTSAASGNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLG-----YMNGHYTQMYP-------

Query:  -----------GQAMVG-ANALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNP--GTVGG
                   G+ MVG A+ ++P Y VY YHQS A+G P   F                   SKP S +  P  GTVGG
Subjt:  -----------GQAMVG-ANALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNP--GTVGG

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.6e-3540.16Show/hide
Query:  MSNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSA
        M+   GL GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +R   S 
Subjt:  MSNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSA

Query:  SATPPLAPQPGSNGGGPRTTSAASGNHVQWYY--PAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGA
                 P   GGG         + +Q  +  P    P  F H PH   +  +GYSP    Y +   +     G  +G    +Y       G     A
Subjt:  SATPPLAPQPGSNGGGPRTTSAASGNHVQWYY--PAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGA

Query:  NALMPMY---------------PVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVP
         +  P Y               P YH+  S+    P H  PP+ +     T  P
Subjt:  NALMPMY---------------PVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVP

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.3e-3540.48Show/hide
Query:  MSNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSA
        M+   GL GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +R   S 
Subjt:  MSNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSA

Query:  SATPPLAPQPGSNGGGPRTTSAASGNHVQWYY--PAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGA
                 P   GGG         + +Q  +  P    P  F H PH   +  +GYSP    Y +   +     G  +G    +Y       G     A
Subjt:  SATPPLAPQPGSNGGGPRTTSAASGNHVQWYY--PAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGA

Query:  NALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAP
         +  P YP    H       P   F    ++  P    PP+  M +   V P
Subjt:  NALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAP

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-3541.15Show/hide
Query:  MSNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSA
        M+   GL GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +R   S 
Subjt:  MSNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSA

Query:  SATPPLAPQPGSNGGGPRTTSAASGNHVQWYY--PAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGA
                 P   GGG         + +Q  +  P    P  F H PH   +  +GYSP    Y +   +     G  +G    +Y       G     A
Subjt:  SATPPLAPQPGSNGGGPRTTSAASGNHVQWYY--PAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGA

Query:  NALMPMY---------------PVYHYHQSHAMGMPAHIFPPS
         +  P Y               P YH+  S+    P H  PP+
Subjt:  NALMPMY---------------PVYHYHQSHAMGMPAHIFPPS

AT3G54770.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-6050.36Show/hide
Query:  MTMMSNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGS
        MT  +N  G FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDK+T RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R   
Subjt:  MTMMSNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGS

Query:  RSASATPPLAPQPGSNGGGPRTTSAASGNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLG-----YMNGHYTQMYP-------
             +P   P+ G+     R T    GNH QWYYP+G      H Q + QAVPFYGY   P+ Y+A ++++N K+G     YMNG+Y QM P       
Subjt:  RSASATPPLAPQPGSNGGGPRTTSAASGNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLG-----YMNGHYTQMYP-------

Query:  -----------GQAMVG-ANALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNP--GTVGG
                   G+ MVG A+ ++P Y VY YHQS A+G P   F                   SKP S +  P  GTVGG
Subjt:  -----------GQAMVG-ANALMPMYPVYHYHQSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNP--GTVGG

AT3G54770.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-4547.58Show/hide
Query:  MRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSASATPPLAPQPGSNGGGPRTTSAASGNHVQ
        M DHF K+G+ILEAVIISDK+T RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R           L P+ G+     R T    GNH Q
Subjt:  MRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSASATPPLAPQPGSNGGGPRTTSAASGNHVQ

Query:  WYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLG-----YMNGHYTQMYP------------------GQAMVG-ANALMPMYPVYHYH
        WYYP+G      H Q + QAVPFYGY   P+ Y+A ++++N K+G     YMNG+Y QM P                  G+ MVG A+ ++P Y VY YH
Subjt:  WYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLG-----YMNGHYTQMYP------------------GQAMVG-ANALMPMYPVYHYH

Query:  QSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNP--GTVGG
        QS A+G P   F                   SKP S +  P  GTVGG
Subjt:  QSHAMGMPAHIFPPSPTAAGPFTAVPPSSIMSKPASVAPNP--GTVGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATGATGAGCAACAATGCAGGTCTGTTCGGCGACACGACACTGACGAAGGTCTTCGTCGGAGGCTTGGCTTGGGAGACTCCCAAGGAAGCCATGAGAGATCACTT
CGAGAAGTTCGGCGAGATCCTGGAGGCGGTTATCATCTCCGATAAAGTCACCGGCAGATCCAAGGGCTATGGATTCGTTACGTTCAAGGACGCGGAATCGGCGAAGAAGG
CTTGTGAGGATTCGGCTCCGATCATCAATGGCCGCCGAGCCAACTGTAATCTGGCTTCCCTTGGAGCTCGGCGCGGCTCGAGGTCGGCTTCGGCTACTCCTCCGCTAGCT
CCTCAGCCTGGATCGAACGGCGGTGGGCCGAGGACGACGTCAGCAGCGTCCGGCAACCACGTGCAGTGGTACTACCCGGCGGGGACTCATCCGACGCCGTTTCATCATCA
GCCTCATCAGCAGGCCGTTCCTTTCTATGGATACTCCCCAAGCCCCACCACTTACATCGCCACGGATATCAGTTACAACCACAAACTAGGGTACATGAACGGGCACTACA
CGCAGATGTATCCGGGGCAGGCTATGGTAGGGGCGAATGCATTGATGCCAATGTACCCGGTGTATCATTACCATCAATCACACGCGATGGGGATGCCGGCCCACATATTC
CCTCCGAGTCCGACGGCGGCGGGTCCATTCACGGCGGTGCCACCGAGTTCTATTATGTCCAAACCGGCCTCCGTTGCTCCCAATCCAGGTACAGTTGGAGGAGGATTCAG
GGGAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTATGATGAGCAACAATGCAGGTCTGTTCGGCGACACGACACTGACGAAGGTCTTCGTCGGAGGCTTGGCTTGGGAGACTCCCAAGGAAGCCATGAGAGATCACTT
CGAGAAGTTCGGCGAGATCCTGGAGGCGGTTATCATCTCCGATAAAGTCACCGGCAGATCCAAGGGCTATGGATTCGTTACGTTCAAGGACGCGGAATCGGCGAAGAAGG
CTTGTGAGGATTCGGCTCCGATCATCAATGGCCGCCGAGCCAACTGTAATCTGGCTTCCCTTGGAGCTCGGCGCGGCTCGAGGTCGGCTTCGGCTACTCCTCCGCTAGCT
CCTCAGCCTGGATCGAACGGCGGTGGGCCGAGGACGACGTCAGCAGCGTCCGGCAACCACGTGCAGTGGTACTACCCGGCGGGGACTCATCCGACGCCGTTTCATCATCA
GCCTCATCAGCAGGCCGTTCCTTTCTATGGATACTCCCCAAGCCCCACCACTTACATCGCCACGGATATCAGTTACAACCACAAACTAGGGTACATGAACGGGCACTACA
CGCAGATGTATCCGGGGCAGGCTATGGTAGGGGCGAATGCATTGATGCCAATGTACCCGGTGTATCATTACCATCAATCACACGCGATGGGGATGCCGGCCCACATATTC
CCTCCGAGTCCGACGGCGGCGGGTCCATTCACGGCGGTGCCACCGAGTTCTATTATGTCCAAACCGGCCTCCGTTGCTCCCAATCCAGGTACAGTTGGAGGAGGATTCAG
GGGAAGATGA
Protein sequenceShow/hide protein sequence
MTMMSNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKVTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGSRSASATPPLA
PQPGSNGGGPRTTSAASGNHVQWYYPAGTHPTPFHHQPHQQAVPFYGYSPSPTTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANALMPMYPVYHYHQSHAMGMPAHIF
PPSPTAAGPFTAVPPSSIMSKPASVAPNPGTVGGGFRGR