CuGenDBv2

Gene ID	Tan0007374
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Transcription initiation factor IIE subunit beta
Genome location	LG01:11439186..11447635
RNA-Seq Expression	Tan0007374
Synteny	Tan0007374
Gene Ontology terms	GO:0006367 - transcription initiation from RNA polymerase II promoter (biological process) GO:0006413 - translational initiation (biological process) GO:0005673 - transcription factor TFIIE complex (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003743 - translation initiation factor activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008452012.1 PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo]

5.4e-139

94.22

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEAC
        MALQE+LDRFKKQQERCQ+TL+GIAA    SKSTPKFTP PA+SIARP APAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQINEAC
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEAC

Query:  YVDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIK
        YVD+NSNKAV+DSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYP+VMEDLQALKASGQ+WLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN
        VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELF+N
Subjt:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN

XP_011653191.1 general transcription factor IIE subunit 2 [Cucumis sativus]

4.8e-140

94.22

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEAC
        MALQE+LDRFKKQQERCQ+TL+GIAA    SKSTPKFTP PA+SIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQINEAC
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEAC

Query:  YVDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIK
        YVD+NSNKAV+DSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYL+RKFPEGIAVIDLKDAYP+VMEDLQALKASGQ+WLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN
        VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELF+N
Subjt:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN

XP_022136771.1 general transcription factor IIE subunit 2-like [Momordica charantia]

7.7e-138

93.82

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAASK--STPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEACYV
        MALQ+KLDRFKKQQERCQTTLTGIAASK  STPKFTP PA+   RPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETR AHTPEQINEACYV
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAASK--STPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEACYV

Query:  DVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIKVD
        D+NSNKAVFDSLRNNPKVHYDGRRF+YKSKHDLKDK+QLLYLIRKFPEGIAVIDLKD+YP VMEDLQALKASGQ+WLLSNFDSQEDIAYPNDPRIQIKVD
Subjt:  DVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIKVD

Query:  DDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN
        DDLK LFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELF+N
Subjt:  DDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN

XP_022984812.1 general transcription factor IIE subunit 2-like [Cucurbita maxima]

8.6e-137

93.12

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Query:  MALQEKLDRFKKQQERCQTTLTGIAASK---STPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEACY
        MALQEKLDRFK+QQERCQTTL+GIAASK   +TP+FTP PA+S  RPPAPA+KFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQINEACY
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAASK---STPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEACY

Query:  VDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIKV
        VD+NSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YP+VMEDLQALKASGQ+WLLSNFDSQEDIAYPNDPRIQIKV
Subjt:  VDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIKV

Query:  DDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN
        DDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELF+N
Subjt:  DDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN

XP_038906431.1 general transcription factor IIE subunit 2-like [Benincasa hispida]

2.3e-137

94.22

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIA----ASKSTPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEAC
        MALQE+LDRFKKQQERCQTTL+GIA    ASKSTPKFTP PA+S  RPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQINEAC
Subjt:  MALQEKLDRFKKQQERCQTTLTGIA----ASKSTPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEAC

Query:  YVDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIK
        YVD+NSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYP+VMEDLQALKASGQ+WLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN
        VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPK KKKKQEISKRTKLTNAHLPELF+N
Subjt:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWU5 Transcription initiation factor IIE subunit beta

2.3e-140

94.22

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEAC
        MALQE+LDRFKKQQERCQ+TL+GIAA    SKSTPKFTP PA+SIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQINEAC
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEAC

Query:  YVDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIK
        YVD+NSNKAV+DSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYL+RKFPEGIAVIDLKDAYP+VMEDLQALKASGQ+WLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN
        VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELF+N
Subjt:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN

A0A1S3BS95 Transcription initiation factor IIE subunit beta

2.6e-139

94.22

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEAC
        MALQE+LDRFKKQQERCQ+TL+GIAA    SKSTPKFTP PA+SIARP APAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQINEAC
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEAC

Query:  YVDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIK
        YVD+NSNKAV+DSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYP+VMEDLQALKASGQ+WLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN
        VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELF+N
Subjt:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN

A0A5A7TNR4 Transcription initiation factor IIE subunit beta

2.6e-139

94.22

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEAC
        MALQE+LDRFKKQQERCQ+TL+GIAA    SKSTPKFTP PA+SIARP APAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQINEAC
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAA----SKSTPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEAC

Query:  YVDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIK
        YVD+NSNKAV+DSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYP+VMEDLQALKASGQ+WLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN
        VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELF+N
Subjt:  VDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN

A0A6J1C4F9 Transcription initiation factor IIE subunit beta

3.7e-138

93.82

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAASK--STPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEACYV
        MALQ+KLDRFKKQQERCQTTLTGIAASK  STPKFTP PA+   RPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETR AHTPEQINEACYV
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAASK--STPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEACYV

Query:  DVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIKVD
        D+NSNKAVFDSLRNNPKVHYDGRRF+YKSKHDLKDK+QLLYLIRKFPEGIAVIDLKD+YP VMEDLQALKASGQ+WLLSNFDSQEDIAYPNDPRIQIKVD
Subjt:  DVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIKVD

Query:  DDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN
        DDLK LFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELF+N
Subjt:  DDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN

A0A6J1J372 Transcription initiation factor IIE subunit beta

4.1e-137

93.12

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAASK---STPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEACY
        MALQEKLDRFK+QQERCQTTL+GIAASK   +TP+FTP PA+S  RPPAPA+KFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQA TPEQINEACY
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAASK---STPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEACY

Query:  VDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIKV
        VD+NSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YP+VMEDLQALKASGQ+WLLSNFDSQEDIAYPNDPRIQIKV
Subjt:  VDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIKV

Query:  DDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN
        DDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELF+N
Subjt:  DDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN

SwissProt top hits

e value

%identity

Alignment

P79011 Transcription initiation factor IIE subunit beta

2.8e-13

29.76

Show/hide

Query:  AQIKRVIDLLLETRQAHTPEQINEACYVDVNSNKAVFDSLRNNPKVHYDGRR--FSYKSKHDLKDKNQLLYLI--RKFPEGIAVIDLKDAYPNVMEDLQA
        +Q+   ++ L E  +  T E+I  A Y+       + + L+ N +++YD R   F++K  H+++    LL  +  +K   G+++ +L+D +PNV  +L+ 
Subjt:  AQIKRVIDLLLETRQAHTPEQINEACYVDVNSNKAVFDSLRNNPKVHYDGRR--FSYKSKHDLKDKNQLLYLI--RKFPEGIAVIDLKDAYPNVMEDLQA

Query:  LKASGQLWLL-SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPAT---NTAKRRANAQHVASSKPKPKKKKQEISKRTKL
        L+  G++ LL +  D    + + ND      VD + +Q++ EI +P   LD+  +L K G+KP +   +T KR  + Q      PK KK K   ++R K+
Subjt:  LKASGQLWLL-SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPAT---NTAKRRANAQHVASSKPKPKKKKQEISKRTKL

Query:  TNAHL
        TN HL
Subjt:  TNAHL

Q54KJ8 General transcription factor IIE subunit 2

1.1e-14

26.77

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Query:  FKKQQERCQTTLTGI--------AASKSTPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLL--LETRQAHTPEQINEACYVD
        FK+ Q +   TL  I        +A K  PK +    SS A   +     S  T        +++ P    +  +++ L  LE   A T E ++   ++ 
Subjt:  FKKQQERCQTTLTGI--------AASKSTPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLL--LETRQAHTPEQINEACYVD

Query:  VNSNKAVFDSLRNNPKVHYDGR-RFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIKVD
        ++    + + LRNN K+   G  RFS+K K +++ +  +L L+  +P GI V +L ++Y N   D++ LK + Q++ +   +S  DI +PND R+++ + 
Subjt:  VNSNKAVFDSLRNNPKVHYDGR-RFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIKVD

Query:  DDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHL
         +L  +++ I+LP +  D+EK+++  G+    +  +   +A+   S+K K ++KK    + TK+TN H+
Subjt:  DDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHL

Arabidopsis top hits

e value

%identity

Alignment

AT4G20330.1 Transcription initiation factor TFIIE, beta subunit

2.4e-97

69.29

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAASK----STPKFTPPPAS-SIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEA
        MAL+E+LD+F KQQ +CQ+TL+ IA+S+    S+ +  P PA+ +  +P A  VKFS+DTERLQ+IN+IRK+PVGAQIKRVIDLL E R A TPEQINE 
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAASK----STPKFTPPPAS-SIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEA

Query:  CYVDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQI
        C+VD+++NKAVFDSLR NPK HYDGRRFSYK+ HD+ DKNQLL L+RK+ +GIAV+DLKDAYPNVMEDL+AL ASG ++LLSN  SQEDIAYPND + +I
Subjt:  CYVDVNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQI

Query:  KVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ-HVASSKPK-PKKKKQEISKRTKLTNAHLPELFRN
        KVDD+ K LFR+I +P DMLDVEK+L K G+KPATNTA+RRA AQ H  S+KPK  KKKKQEISKRTKLTNAHLPELF+N
Subjt:  KVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ-HVASSKPK-PKKKKQEISKRTKLTNAHLPELFRN

AT4G21010.1 Transcription initiation factor TFIIE, beta subunit

2.3e-79

59.57

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAASKST-PKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEACYVD
        MAL+E+LD+F KQQE+CQ+TL+ I++S++   +   P A++  +P     KFS +T++LQHI +IR S VGAQ+K VIDLL +TR A+T EQINEACYVD
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAASKST-PKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEACYVD

Query:  VNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQL-WLLSNFDSQEDIAYPNDPRIQIKVD
        +++NKAVFDSLR NPKVHYDGRRFSYK+ H++KDK QLL  + K  + I V DLKDAYPNVMEDL++LK+SG++ WLLSN DS+E   Y N+     K+D
Subjt:  VNSNKAVFDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQL-WLLSNFDSQEDIAYPNDPRIQIKVD

Query:  DDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ-HVASSKPK-PKKKKQEISKRTKLTNAHLPELFRN
        D+LK LFR+I +P DML+VEK+L K G+KPATN A+RRA  Q H  S+KPK  KKKK+EI+ RTKLTN+H+ ELF++
Subjt:  DDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ-HVASSKPK-PKKKKQEISKRTKLTNAHLPELFRN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGTTGCAAGAAAAACTAGATAGGTTTAAGAAACAGCAAGAAAGATGTCAAACTACCTTGACTGGCATTGCTGCATCCAAGTCTACGCCCAAGTTTACGCCTCCACC
GGCTTCTTCCATTGCAAGACCTCCAGCTCCTGCTGTAAAATTTTCAAATGATACCGAGAGACTTCAGCACATTAACAGCATAAGGAAATCCCCAGTTGGGGCTCAGATCA
AGAGGGTTATTGACCTGCTGCTGGAGACTAGGCAAGCCCACACACCAGAGCAAATCAATGAAGCATGTTATGTTGATGTAAATTCAAACAAGGCCGTTTTTGATAGTCTG
CGGAATAACCCAAAGGTGCACTATGATGGGAGACGTTTCTCATACAAGTCCAAGCATGATCTGAAGGATAAGAATCAGCTTCTTTACTTAATACGGAAATTTCCAGAAGG
CATTGCTGTCATTGATCTCAAGGATGCTTATCCAAACGTTATGGAAGACTTGCAAGCCCTGAAAGCCTCAGGCCAGCTTTGGCTTCTCTCAAACTTTGATTCACAAGAAG
ATATTGCATACCCAAACGACCCAAGAATTCAAATCAAGGTAGACGACGATCTGAAGCAACTCTTTCGGGAGATTGAATTACCTCGTGACATGCTCGATGTCGAGAAGGAT
CTTCAGAAGAATGGGATGAAACCTGCGACCAACACTGCAAAGAGGCGAGCCAATGCACAACATGTGGCATCCTCGAAGCCGAAGCCCAAGAAAAAGAAGCAAGAGATCAG
CAAGAGGACCAAGCTCACCAATGCACATCTTCCCGAGCTCTTCAGAAATTAG

mRNA sequence

Show/hide mRNA sequence

CGAAAAAGAAAAGAACACCTTACCCTTCTTCCCCCACTTTCTTTCCCCTCTTCCATTGTCGCCGTAGCTGCAGCCTGCAGCCACAAATCTGATCCTCCCGGAACGGGTTG
AGAATTGAAGGGGTTTTGATGGCGTTGCAAGAAAAACTAGATAGGTTTAAGAAACAGCAAGAAAGATGTCAAACTACCTTGACTGGCATTGCTGCATCCAAGTCTACGCC
CAAGTTTACGCCTCCACCGGCTTCTTCCATTGCAAGACCTCCAGCTCCTGCTGTAAAATTTTCAAATGATACCGAGAGACTTCAGCACATTAACAGCATAAGGAAATCCC
CAGTTGGGGCTCAGATCAAGAGGGTTATTGACCTGCTGCTGGAGACTAGGCAAGCCCACACACCAGAGCAAATCAATGAAGCATGTTATGTTGATGTAAATTCAAACAAG
GCCGTTTTTGATAGTCTGCGGAATAACCCAAAGGTGCACTATGATGGGAGACGTTTCTCATACAAGTCCAAGCATGATCTGAAGGATAAGAATCAGCTTCTTTACTTAAT
ACGGAAATTTCCAGAAGGCATTGCTGTCATTGATCTCAAGGATGCTTATCCAAACGTTATGGAAGACTTGCAAGCCCTGAAAGCCTCAGGCCAGCTTTGGCTTCTCTCAA
ACTTTGATTCACAAGAAGATATTGCATACCCAAACGACCCAAGAATTCAAATCAAGGTAGACGACGATCTGAAGCAACTCTTTCGGGAGATTGAATTACCTCGTGACATG
CTCGATGTCGAGAAGGATCTTCAGAAGAATGGGATGAAACCTGCGACCAACACTGCAAAGAGGCGAGCCAATGCACAACATGTGGCATCCTCGAAGCCGAAGCCCAAGAA
AAAGAAGCAAGAGATCAGCAAGAGGACCAAGCTCACCAATGCACATCTTCCCGAGCTCTTCAGAAATTAGAGAAAAACCCTATGCTCATAAGGTCATCTGTAGGCTGAGA
TGCAACAATATAGTTATGATCAATGGACTCTTGTAGATAACATTCTCCATCCCTTCTGTTTGATATATTGTTTTTTTTCCCCTTTCTTTTCATGATATCGTCGTAGAATT
AAATGCTTCTATTGTAACTTTTGTGTATGTCTCTGTTTTTACTTCAATTAATTGAACAATTGAAATATAAAAGATAGGTTCAATCAAACTAGATATGTGACATGAGAGGT
TCATCATATTTGTAAACTCTTAAATTCTGTTACTTCAACTTGATTTGATTTGAGAAGAATAGATATGTGCATCACTAATCCTTTGCCATAAGGCCTGTTTGCTTGAAGGA
GGCTGCATTGCTGGTGCTTTCCTGTTTAGTTTGGTTTTGGTTTTTACATTTTCAAATATCAATTTGATACAAGTGTATTTTGTACTTAGCTTTAGCTTGTTGAACTATTC
TACACGCTCAATTATTTTCAATTTTATATCAGGTTTGACAAAGGACGGC

Protein sequence

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MALQEKLDRFKKQQERCQTTLTGIAASKSTPKFTPPPASSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAHTPEQINEACYVDVNSNKAVFDSL
RNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPNVMEDLQALKASGQLWLLSNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKD
LQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFRN

Tan0007374 (gene) of Snake gourd v1 genome