; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007397 (gene) of Snake gourd v1 genome

Gene IDTan0007397
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionserine/arginine-rich splicing factor SR34A
Genome locationLG07:9013581..9018799
RNA-Seq ExpressionTan0007397
SyntenyTan0007397
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137780.1 serine/arginine-rich splicing factor SR34A [Momordica charantia]1.7e-12793.31Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSS+DRRSSYG  GG
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG

Query:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV
        GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD+EGTFGIVDYTNYDDMKYAIRKLDDTEF+NPWARAYIRV
Subjt:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV

Query:  KKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERSE
        KKYDGSPT      RSRSRSRSRSRSRSRS+SRSRSARRNRSKS ERSVSRSVSRSRSPSPVKSSRPRSKS+SGSPRE RE SE
Subjt:  KKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERSE

XP_022996414.1 serine/arginine-rich splicing factor SR34A-like [Cucurbita maxima]6.2e-12288.69Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG
        MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSS+D RS+YGGS  
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG

Query:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV
                    GGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIRV
Subjt:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV

Query:  KKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS
        KKY+GSPT  R RSR+RSRSRSRSRSRSRSRSRSRSA+RNRSKSAE+SVSRSVSRSRS SPVKSSR RSKS+SGSPREARE S
Subjt:  KKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS

XP_023533513.1 serine/arginine-rich splicing factor SR34A-like isoform X1 [Cucurbita pepo subsp. pepo]2.4e-12188.85Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYK----YGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYG
        MSSRFSRTIYVGNLPSDIRENEIEDLFYK    YGRILDIELKIPPRPPCYCFVEFENVRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSS+D RS+YG
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYK----YGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYG

Query:  GSGGGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARA
        GS         GGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARA
Subjt:  GSGGGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARA

Query:  YIRVKKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS
        YIRVKKY+GSPT    R RSR+RSRSRSRSRSRSRSRSRSARRNRSKSAE+SVSRSVSRSRS SPVKSSR RSKS+SGSPREARE S
Subjt:  YIRVKKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS

XP_023533518.1 serine/arginine-rich splicing factor SR34A-like isoform X2 [Cucurbita pepo subsp. pepo]4.3e-12390.11Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG
        MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSS+D RS+YGGS  
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG

Query:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV
               GGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIRV
Subjt:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV

Query:  KKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS
        KKY+GSPT    R RSR+RSRSRSRSRSRSRSRSRSARRNRSKSAE+SVSRSVSRSRS SPVKSSR RSKS+SGSPREARE S
Subjt:  KKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS

XP_038907230.1 serine/arginine-rich splicing factor SR34A [Benincasa hispida]8.9e-12992.71Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSS+DRRSSY     
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG

Query:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV
           GGGG GGGGG GGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA+RKLDDTEFRNPWARAYIRV
Subjt:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV

Query:  KKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRS----ARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERSE
        KKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRS    ARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKS+SGSPR+ARE SE
Subjt:  KKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRS----ARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERSE

TrEMBL top hitse value%identityAlignment
A0A0A0KLR9 Uncharacterized protein5.6e-12994.41Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSY-GGSG
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSS+DRRSSY GG G
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSY-GGSG

Query:  GGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
        GGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR
Subjt:  GGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIR

Query:  VKKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAE-RSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERSE
        VKKYDGSPT    RSRSRSRSRSRSRSRSRSRSRSR+ARRNRSKSAE RSVSRSVSRSRSPSP+KSSRPRSKS+SGSPR+ARE SE
Subjt:  VKKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAE-RSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERSE

A0A6J1C7M8 serine/arginine-rich splicing factor SR34A8.1e-12893.31Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG
        MSSRFSRTIYVGNLPSDI+E EIEDLFYKYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSS+DRRSSYG  GG
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG

Query:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV
        GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD+EGTFGIVDYTNYDDMKYAIRKLDDTEF+NPWARAYIRV
Subjt:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV

Query:  KKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERSE
        KKYDGSPT      RSRSRSRSRSRSRSRS+SRSRSARRNRSKS ERSVSRSVSRSRSPSPVKSSRPRSKS+SGSPRE RE SE
Subjt:  KKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERSE

A0A6J1H330 serine/arginine-rich splicing factor SR34A-like2.4e-11986.57Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG
        MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSS+D RS+YGGS  
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG

Query:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV
                    GGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIRV
Subjt:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV

Query:  KKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS
        KKY+GSPT        R RSR+RSRSRSRSRSRSRS RRNRSKSAE+SVSRSVSRSRS SPVKSSR RSKS+SGSPREARE S
Subjt:  KKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS

A0A6J1IB34 serine/arginine-rich splicing factor SR34A-like isoform X14.8e-12087.29Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSY--GGS
        MSSRFSRTIYVGNLPSDI+E EIEDLF+KYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSS+DRRSSY  GG 
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSY--GGS

Query:  GGGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYI
        GGGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNYDDMKYAIRKLDDTEFRNPWAR YI
Subjt:  GGGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYI

Query:  RVKKYDGSPTRSRSRS-------------------------RSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKS
        RVKKYDGSPTRSRSRS                         RSRSR+RS+SRSRSRSRSRSRSAR NRSKSAERSVSRSVSRSRSPSPVKS
Subjt:  RVKKYDGSPTRSRSRS-------------------------RSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKS

A0A6J1K1U7 serine/arginine-rich splicing factor SR34A-like3.0e-12288.69Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG
        MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIR RDGYNFDGCRLRVELAHGGRGPSS+D RS+YGGS  
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG

Query:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV
                    GGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS DSEGTFG VDYTNYDDMKYAIRKLDDTEF+NPWARAYIRV
Subjt:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV

Query:  KKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS
        KKY+GSPT  R RSR+RSRSRSRSRSRSRSRSRSRSA+RNRSKSAE+SVSRSVSRSRS SPVKSSR RSKS+SGSPREARE S
Subjt:  KKYDGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS

SwissProt top hitse value%identityAlignment
A2RVS6 Serine/arginine-rich splicing factor SR34A2.7e-10475.68Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG
        MS RFSR+IYVGNLP DIRE+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE+ RDAEDAI+ RDGYN DGCRLRVELAHGGRG SS+DRR  Y     
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG

Query:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV
        GGGG G GGGGGGGG  RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRV
Subjt:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV

Query:  KKYDGSPTRSRSRSRSRSRSRSRSR--------SRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSP-VKSSRPRSKSKSGSPREARERS
        KKY+ S +RSRS SRSRSRSRSRSR        SRSRS SRS+S R++ SKS  RS+SRS+S+SRSPSP  K S PR+ S+S S   +R RS
Subjt:  KKYDGSPTRSRSRSRSRSRSRSRSR--------SRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSP-VKSSRPRSKSKSGSPREARERS

F4JHI7 Serine/arginine-rich splicing factor SR34B1.0e-7464.89Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG
        MSSR SRTIYVGNLP DIRE E+EDLF KYG ++ I+LKIPPRPP Y FVEFE+ RDA+DAI  RDGY+FDG  LRVELAHGGR  SS+D R SY G   
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG

Query:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV
            G GG GGG GGG   G S+RSEYRV+V GLPSSASWQDLKDHMRK G+VCF++V RD  GT GIVDYT+Y+DMKYA   LDDTEFRN ++  Y+RV
Subjt:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV

Query:  KKYDG-----SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPR
        ++YD      SP+R RS S+SRSR RS SRSRSRSRSRS+S R  ++KS  RS ++S SRS        SR RSKS+S SPR
Subjt:  KKYDG-----SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPR

O22315 Serine/arginine-rich-splicing factor SR348.8e-7963.89Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG
        MSSR SRT+YVGNLP DIRE E+EDLF KYG ++ I+LK+PPRPP Y FVEF++ RDAEDAI  RDGY+FDG RLRVELAHGGR  SS+D R S+     
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG

Query:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV
           GGG GGG G G GG  G S+RSE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEFRN ++  Y+RV
Subjt:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV

Query:  KKYDG-----SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS
        ++YD      SP+R RS S+SRSRSR RS SRSRSRSRSRS R  ++KS+ RS ++S SRS          PRSKS+S SPR +R RS
Subjt:  KKYDG-----SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS

Q6DII2 Serine/arginine-rich splicing factor 11.1e-5762.35Show/hide
Query:  IYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGGGGGGGGGG
        IYVGNLP DIR  +IED+FYKYG I DI+LK     P + FVEFE+ RDAEDA+  RDGY++DG RLRVE    GRG          GG GGGGGGGGGG
Subjt:  IYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGGGGGGGGGG

Query:  GGGGGGGG---GRFG-VSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFR-NPWARAYIRVKKY
        GGGGGGGG   GR+G  S+RSEYRV+V GLP S SWQDLKDHMR+AGDVC+A+V RD  GT G+V++   +DM YA+RKLD+T+FR +    AYIRV K 
Subjt:  GGGGGGGG---GRFG-VSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFR-NPWARAYIRVKKY

Query:  DGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRS
        DG  + S  RSRSRSRSRSRSRSRS SRSRS S RR+R  S   S   S SRSR+
Subjt:  DGSPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRS

Q9XFR5 Serine/arginine-rich splicing factor SR301.1e-6859.72Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGR--GPSSNDRRSSYGGS
        MSSR++RTIYVGNLP DIR+ E+EDLFYKYG I+DI+LKIPPRPP Y FVEFE+ RDA+DAI  RDGY+FDGCRLRVE+AHGGR   PS +   SSY  S
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGR--GPSSNDRRSSYGGS

Query:  GGGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYI
                               S+RS+YRV+V GLP SASWQDLKDHMRKAGDVCF+EV  D +G  G+VDY+NYDDMKYAIRKLD TEFRN ++ AYI
Subjt:  GGGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYI

Query:  RVKKYDG-----SPTRSRS-RSRSRSRSRS---RSRSRSRSRSRS---RSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSG
        RV++Y+      SP  S+S RSRSRSR  S    S+SRS S +RS   RS   +RS+S   SVSRS SRS+S S  +S+ P S   SG
Subjt:  RVKKYDG-----SPTRSRS-RSRSRSRSRS---RSRSRSRSRSRS---RSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSG

Arabidopsis top hitse value%identityAlignment
AT1G02840.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.2e-8063.89Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG
        MSSR SRT+YVGNLP DIRE E+EDLF KYG ++ I+LK+PPRPP Y FVEF++ RDAEDAI  RDGY+FDG RLRVELAHGGR  SS+D R S+     
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG

Query:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV
           GGG GGG G G GG  G S+RSE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEFRN ++  Y+RV
Subjt:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV

Query:  KKYDG-----SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS
        ++YD      SP+R RS S+SRSRSR RS SRSRSRSRSRS R  ++KS+ RS ++S SRS          PRSKS+S SPR +R RS
Subjt:  KKYDG-----SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS

AT1G02840.3 RNA-binding (RRM/RBD/RNP motifs) family protein6.2e-8063.89Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG
        MSSR SRT+YVGNLP DIRE E+EDLF KYG ++ I+LK+PPRPP Y FVEF++ RDAEDAI  RDGY+FDG RLRVELAHGGR  SS+D R S+     
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG

Query:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV
           GGG GGG G G GG  G S+RSE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT G+VDYT Y+DMKYA++KLDDTEFRN ++  Y+RV
Subjt:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV

Query:  KKYDG-----SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS
        ++YD      SP+R RS S+SRSRSR RS SRSRSRSRSRS R  ++KS+ RS ++S SRS          PRSKS+S SPR +R RS
Subjt:  KKYDG-----SPTRSRSRSRSRSRSRSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERS

AT3G49430.1 SER/ARG-rich protein 34A1.9e-10575.68Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG
        MS RFSR+IYVGNLP DIRE+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE+ RDAEDAI+ RDGYN DGCRLRVELAHGGRG SS+DRR  Y     
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG

Query:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV
        GGGG G GGGGGGGG  RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRV
Subjt:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV

Query:  KKYDGSPTRSRSRSRSRSRSRSRSR--------SRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSP-VKSSRPRSKSKSGSPREARERS
        KKY+ S +RSRS SRSRSRSRSRSR        SRSRS SRS+S R++ SKS  RS+SRS+S+SRSPSP  K S PR+ S+S S   +R RS
Subjt:  KKYDGSPTRSRSRSRSRSRSRSRSR--------SRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSP-VKSSRPRSKSKSGSPREARERS

AT3G49430.2 SER/ARG-rich protein 34A5.6e-10577.45Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG
        MS RFSR+IYVGNLP DIRE+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE+ RDAEDAI+ RDGYN DGCRLRVELAHGGRG SS+DRR  Y     
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG

Query:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV
        GGGG G GGGGGGGG  RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRV
Subjt:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV

Query:  KKYDGSPTRSRSRSRSRSRSRSRSR--------SRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRP
        KKY+ S +RSRS SRSRSRSRSRSR        SRSRS SRS+S R++ SKS  RS+SRS+S+SRSPSP K   P
Subjt:  KKYDGSPTRSRSRSRSRSRSRSRSR--------SRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRP

AT3G49430.3 SER/ARG-rich protein 34A1.9e-10575.68Show/hide
Query:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG
        MS RFSR+IYVGNLP DIRE+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE+ RDAEDAI+ RDGYN DGCRLRVELAHGGRG SS+DRR  Y     
Subjt:  MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGG

Query:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV
        GGGG G GGGGGGGG  RFGVS+ SE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+GT+G+VDYTNYDDMKYAIRKLDDTEFRNPWAR +IRV
Subjt:  GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRV

Query:  KKYDGSPTRSRSRSRSRSRSRSRSR--------SRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSP-VKSSRPRSKSKSGSPREARERS
        KKY+ S +RSRS SRSRSRSRSRSR        SRSRS SRS+S R++ SKS  RS+SRS+S+SRSPSP  K S PR+ S+S S   +R RS
Subjt:  KKYDGSPTRSRSRSRSRSRSRSRSR--------SRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSP-VKSSRPRSKSKSGSPREARERS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTCGTTTTTCTCGCACAATATATGTTGGAAACTTGCCTTCAGACATAAGAGAGAATGAAATTGAAGATTTGTTTTACAAGTATGGTCGAATTTTGGATATTGA
ATTGAAGATTCCGCCGCGCCCTCCATGTTATTGTTTTGTGGAGTTTGAGAATGTTAGGGATGCAGAAGATGCAATTCGAGCTCGTGATGGATATAATTTTGATGGTTGCC
GTCTGAGGGTTGAGCTTGCACATGGGGGTAGAGGCCCTTCATCAAATGATCGTCGTAGCAGTTATGGTGGTAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAGGTGGA
GGAGGAGGAGGAGGAGGAGGACGTTTTGGTGTTTCAAAACGATCAGAATATCGAGTTATTGTACGTGGACTCCCATCTTCTGCTTCTTGGCAGGATTTGAAGGATCATAT
GCGCAAGGCTGGTGATGTGTGTTTTGCTGAAGTTTCCCGTGACAGTGAAGGAACTTTTGGGATTGTTGATTATACTAACTATGACGACATGAAATATGCTATTCGAAAAC
TCGATGATACTGAATTCAGAAATCCTTGGGCAAGAGCATACATTCGGGTGAAGAAGTATGATGGAAGTCCCACTAGGAGTCGGAGCAGGAGCAGGAGCAGGAGCCGTAGT
AGAAGCCGGAGCCGGAGCAGGAGCCGAAGCCGGAGCCGGAGCCGGAGTGCTAGACGAAATAGGAGCAAATCAGCAGAACGATCTGTCTCTAGATCAGTTTCAAGATCAAG
ATCTCCATCCCCTGTGAAATCTTCAAGGCCACGGTCAAAATCAAAATCTGGATCACCACGTGAGGCGCGAGAACGCAGCGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGTCGTTTTTCTCGCACAATATATGTTGGAAACTTGCCTTCAGACATAAGAGAGAATGAAATTGAAGATTTGTTTTACAAGTATGGTCGAATTTTGGATATTGA
ATTGAAGATTCCGCCGCGCCCTCCATGTTATTGTTTTGTGGAGTTTGAGAATGTTAGGGATGCAGAAGATGCAATTCGAGCTCGTGATGGATATAATTTTGATGGTTGCC
GTCTGAGGGTTGAGCTTGCACATGGGGGTAGAGGCCCTTCATCAAATGATCGTCGTAGCAGTTATGGTGGTAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAGGTGGA
GGAGGAGGAGGAGGAGGAGGACGTTTTGGTGTTTCAAAACGATCAGAATATCGAGTTATTGTACGTGGACTCCCATCTTCTGCTTCTTGGCAGGATTTGAAGGATCATAT
GCGCAAGGCTGGTGATGTGTGTTTTGCTGAAGTTTCCCGTGACAGTGAAGGAACTTTTGGGATTGTTGATTATACTAACTATGACGACATGAAATATGCTATTCGAAAAC
TCGATGATACTGAATTCAGAAATCCTTGGGCAAGAGCATACATTCGGGTGAAGAAGTATGATGGAAGTCCCACTAGGAGTCGGAGCAGGAGCAGGAGCAGGAGCCGTAGT
AGAAGCCGGAGCCGGAGCAGGAGCCGAAGCCGGAGCCGGAGCCGGAGTGCTAGACGAAATAGGAGCAAATCAGCAGAACGATCTGTCTCTAGATCAGTTTCAAGATCAAG
ATCTCCATCCCCTGTGAAATCTTCAAGGCCACGGTCAAAATCAAAATCTGGATCACCACGTGAGGCGCGAGAACGCAGCGAATGATGCAGAACTATGATGATATTGATAT
GAATGGTTATAATATTCAGGATGCAACAATCAGTTGGATTTCATTTTAGTTTAGGACCTATGCAGACTGGTTATGAGGAGTTGAGTTAGCTGAAAAATTGCATTAGTTGT
GTTGTATGGATATCTTTTAAACCCTTCTCACATATCGACCTACCATCATTTTGTTTGGAGACATTTTTAGGTATTTGCATGTCTTAAGAGTTACTTGCACACTGCTTTTG
GAATTTGGAACCAAGATTTTTAAATCTTCTGATTAGAAATTTGAGAAATGATGATGATGATTGTTATTATTTTATCTTGTTTGGAACAAGAAA
Protein sequenceShow/hide protein sequence
MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSNDRRSSYGGSGGGGGGGGGGGG
GGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRSRSRSRS
RSRSRSRSRSRSRSRSARRNRSKSAERSVSRSVSRSRSPSPVKSSRPRSKSKSGSPREARERSE