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Tan0007406 (gene) of Snake gourd v1 genome

Gene IDTan0007406
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG08:3147965..3148316
RNA-Seq ExpressionTan0007406
SyntenyTan0007406
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2023999.1 hypothetical protein ES319_D06G057400v1 [Gossypium barbadense]4.4e-0438.55Show/hide
Query:  VLLLLLIISEAQGIRLLE--KGLSKEYKKNGAVLTDKNG--GDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH
        ++L ++ +S  QGIRL +  K    +  + GA++ + NG  GD+L+  +        RK   HWLP I EDY+GPR H+ RHH
Subjt:  VLLLLLIISEAQGIRLLE--KGLSKEYKKNGAVLTDKNG--GDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH

KAE8126159.1 hypothetical protein FH972_020903 [Carpinus fangiana]6.1e-0643.18Show/hide
Query:  VLLLLLIISEAQGIRL----LEKGLSKEYKKNGAVLTD-----KNGGDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH
        +LL LL+  EAQGIRL    +  G  K+++ +G  L       K+G     TMK++  ++ L K   HWLP I EDY+GPRSH+ RHH
Subjt:  VLLLLLIISEAQGIRL----LEKGLSKEYKKNGAVLTD-----KNGGDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH

KAG6586348.1 Ubiquitin-like domain-containing protein CIP73, partial [Cucurbita argyrosperma subsp. sororia]3.8e-1671.83Show/hide
Query:  MAVLLLLLIISEAQGIRLLEKGLSKEYKKNGAVLTDKNGGDLLVTMKRKAPNKALRKPFSHWLPGIQEDYH
        MAVLLL LIISEA+GIRLL+K +SKE K        +NGGDLL TMK +APNKA RKP+SHWLPGIQEDYH
Subjt:  MAVLLLLLIISEAQGIRLLEKGLSKEYKKNGAVLTDKNGGDLLVTMKRKAPNKALRKPFSHWLPGIQEDYH

KAG6769267.1 hypothetical protein POTOM_024887 [Populus tomentosa]8.8e-0537.76Show/hide
Query:  MAVLLLLLIISEAQGIRL-------------LEKGLSKEYKKNGAVLTD----KNGGDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH
        +++LLL  ++ +AQGIRL              EK  SKE   +G VL +    K G     TM+++      +K   HWLP I EDY+GPR+HK +HH
Subjt:  MAVLLLLLIISEAQGIRL-------------LEKGLSKEYKKNGAVLTD----KNGGDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH

XP_024445403.1 uncharacterized protein LOC112324937 [Populus trichocarpa]4.4e-0434.65Show/hide
Query:  MAVLLLLLIISEAQGIRLLEKGLS--------------KEYKKNGAVL------TDKNGGDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRH
        +++LLL  ++ EAQGIR LEKG                KE   NG VL       +++    + + +++    A +    HWLP I EDY+GPR+HK +H
Subjt:  MAVLLLLLIISEAQGIRLLEKGLS--------------KEYKKNGAVL------TDKNGGDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRH

Query:  H
        H
Subjt:  H

TrEMBL top hitse value%identityAlignment
A0A0A0LJ48 Uncharacterized protein3.9e-2778.05Show/hide
Query:  MAVLLL-LLIISEAQGIRLLEKGLSKEYKKNGAVLTDKNGGDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH
        MAVLLL L+I+ +AQGIRLLEKG+SKEYKK+G  L +KNGGD L+TMK++AP +ALRKP+SHWLPGIQEDYHGPRSHKSRHH
Subjt:  MAVLLL-LLIISEAQGIRLLEKGLSKEYKKNGAVLTDKNGGDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH

A0A0D2U6Z9 Uncharacterized protein2.1e-0438.55Show/hide
Query:  VLLLLLIISEAQGIRLLE--KGLSKEYKKNGAVLTDKNG--GDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH
        ++L ++ +S  QGIRL +  K    +  + GA++ + NG  GD+L+  +        RK   HWLP I EDY+GPR H+ RHH
Subjt:  VLLLLLIISEAQGIRLLE--KGLSKEYKKNGAVLTDKNG--GDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH

A0A5J5R1K5 Uncharacterized protein2.1e-0438.55Show/hide
Query:  VLLLLLIISEAQGIRLLE--KGLSKEYKKNGAVLTDKNG--GDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH
        ++L ++ +S  QGIRL +  K    +  + GA++ + NG  GD+L+  +        RK   HWLP I EDY+GPR H+ RHH
Subjt:  VLLLLLIISEAQGIRLLE--KGLSKEYKKNGAVLTDKNG--GDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH

A0A5N6RX03 Uncharacterized protein2.9e-0643.18Show/hide
Query:  VLLLLLIISEAQGIRL----LEKGLSKEYKKNGAVLTD-----KNGGDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH
        +LL LL+  EAQGIRL    +  G  K+++ +G  L       K+G     TMK++  ++ L K   HWLP I EDY+GPRSH+ RHH
Subjt:  VLLLLLIISEAQGIRL----LEKGLSKEYKKNGAVLTD-----KNGGDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH

A0A6M2ES64 Uncharacterized protein4.2e-0538.54Show/hide
Query:  AVLLLLLIISEAQGIRL-------------LEKGLSKEYKKNGAVLTDK---NGGDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH
        ++LLL  ++ +AQGIRL              EK  SKE K +G VL +      G    TM+++      +K   HWLP I EDY+GPR+HK  HH
Subjt:  AVLLLLLIISEAQGIRL-------------LEKGLSKEYKKNGAVLTDK---NGGDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCTTCTTCTTTTGCTCATCATCTCCGAAGCTCAAGGGATTCGATTGTTGGAGAAAGGACTCAGCAAAGAGTACAAGAAAAATGGAGCTGTTTTGACTGATAA
AAATGGTGGAGATTTGTTGGTGACGATGAAGAGGAAAGCCCCAAACAAGGCCTTAAGAAAACCTTTTTCTCATTGGCTACCAGGCATTCAAGAAGATTACCATGGGCCAA
GAAGCCATAAATCTAGGCACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTCTTCTTCTTTTGCTCATCATCTCCGAAGCTCAAGGGATTCGATTGTTGGAGAAAGGACTCAGCAAAGAGTACAAGAAAAATGGAGCTGTTTTGACTGATAA
AAATGGTGGAGATTTGTTGGTGACGATGAAGAGGAAAGCCCCAAACAAGGCCTTAAGAAAACCTTTTTCTCATTGGCTACCAGGCATTCAAGAAGATTACCATGGGCCAA
GAAGCCATAAATCTAGGCACCATTAG
Protein sequenceShow/hide protein sequence
MAVLLLLLIISEAQGIRLLEKGLSKEYKKNGAVLTDKNGGDLLVTMKRKAPNKALRKPFSHWLPGIQEDYHGPRSHKSRHH