CuGenDBv2

Gene ID	Tan0007483
Organism	Trichosanthes anguina (Snake gourd v1)
Description	50S ribosomal protein L35
Genome location	LG07:71977138..71982547
RNA-Seq Expression	Tan0007483
Synteny	Tan0007483
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001706 - Ribosomal protein L35, non-mitochondrial IPR021137 - Ribosomal protein L35 IPR037229 - Ribosomal protein L35 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7036224.1 hypothetical protein SDJN02_03026 [Cucurbita argyrosperma subsp. argyrosperma]

2.7e-72

88.1

Show/hide

Query:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWCSKLRSAAAKPS+IVHSVSSTRRIFHSAPS YQPLHF PNNLSSRSL NA LQTHSSLAAYQC RS   PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAH KSKK+KRRLRQP  VPLAYAKVMKKLNFCG
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG

XP_022156090.1 uncharacterized protein LOC111023059 [Momordica charantia]

3.6e-77

92.26

Show/hide

Query:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWC+KLRSAAAKPS++VHSVSSTRRIFHS+PS YQPLHF PNNLSSRS+FNA LQTHSSLAAYQC RSS LPLSVVQVRHVSSRERRKRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG
        KLKKTK+KFYSSYKSRFWMMKDGSIKRRKEGKRHNAH KSKKSKRRLRQPA VPLAYAKVMKKLNFCG
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG

XP_022931031.1 uncharacterized protein LOC111437349 [Cucurbita moschata]

7.0e-73

88.69

Show/hide

Query:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWCSKLRSAAAKPS+IVHSVSSTRRIFHSAPS YQPLHF PNNLSSRSL NA LQTHSSLAAYQC RSS  PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAH KSKK+KRRLRQP  VPLAYAKVMKKLNFCG
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG

XP_022996248.1 uncharacterized protein LOC111491530 [Cucurbita maxima]

8.3e-74

89.29

Show/hide

Query:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWCSKLRSAAAKPS+IVHSVSSTRRIFHS PS YQPLHF PNNLSSRSL NA LQTHSSLAAYQC RSS  PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG
        KLKKTK+KFYSSYKSRFW+ KDGSIKRRKEGKRHNAH KSKK+KRRLRQPA VPLAYAKVMKKLNFCG
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG

XP_023532529.1 uncharacterized protein LOC111794661 [Cucurbita pepo subsp. pepo]

2.4e-73

89.29

Show/hide

Query:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWCSKLRSAAAKPS+IVHSVSSTRRIFHSAPS YQPLHF PNNLSSRSL NA LQTHSSLAAYQC RSS  PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAH KSKK+KRRLRQPA VPLAYAKVMKKLNFCG
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBT5 Uncharacterized protein

4.3e-68

85.03

Show/hide

Query:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLR C+KLRSAAAKPS+I++SVSSTRRIFHSAPS YQPLHF  NNL+SRSLFNA  QTHS LAAYQC RSS LPLSVVQVRHVSSR+RR +RKP TP TS
Subjt:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFC
        KLKKTKLK YSSYKSRFW+MKDGSIKRR EGKRHNAHSKSK+SKR+LR+PAIVPLAYAKVMKKLNFC
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFC

A0A1S3CDR4 uncharacterized protein LOC103499252

4.6e-70

86.83

Show/hide

Query:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWC+KLRSAAAKPS+IV SVSSTRRIFHSAPS YQPLHF PNNL+SRSLFNA  QTHS LAAYQC RSS LPLSVVQVRHVSSR+RR +RKP TP TS
Subjt:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFC
        KLKKTKLK YSSYKSRFW+MKDGSIKRR EGKRHNAHSKSK+SKR+LR+PAIVPLAYAKVMKKLNFC
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFC

A0A6J1DPB8 uncharacterized protein LOC111023059

1.7e-77

92.26

Show/hide

Query:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWC+KLRSAAAKPS++VHSVSSTRRIFHS+PS YQPLHF PNNLSSRS+FNA LQTHSSLAAYQC RSS LPLSVVQVRHVSSRERRKRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG
        KLKKTK+KFYSSYKSRFWMMKDGSIKRRKEGKRHNAH KSKKSKRRLRQPA VPLAYAKVMKKLNFCG
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG

A0A6J1ESK5 uncharacterized protein LOC111437349

3.4e-73

88.69

Show/hide

Query:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWCSKLRSAAAKPS+IVHSVSSTRRIFHSAPS YQPLHF PNNLSSRSL NA LQTHSSLAAYQC RSS  PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAH KSKK+KRRLRQP  VPLAYAKVMKKLNFCG
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG

A0A6J1KAA4 uncharacterized protein LOC111491530

4.0e-74

89.29

Show/hide

Query:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWCSKLRSAAAKPS+IVHSVSSTRRIFHS PS YQPLHF PNNLSSRSL NA LQTHSSLAAYQC RSS  PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG
        KLKKTK+KFYSSYKSRFW+ KDGSIKRRKEGKRHNAH KSKK+KRRLRQPA VPLAYAKVMKKLNFCG
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G45590.1 Ribosomal protein L35

4.1e-31

46.51

Show/hide

Query:  MLRWCSKLRSAAAKPSR-IVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRER----RKRRKPM
        M R+C+KLRS + + +R +    +S  R+ H +PSP + L       ++ + ++         +      ++F+P   VQVR+++S+E+    +K+ +P 
Subjt:  MLRWCSKLRSAAAKPSR-IVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRER----RKRRKPM

Query:  TPVTSKLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFC
        TP+TSK+KK K+KFYSS+K RF  + DG+I+R KEGKRHNAH KSKKSKRRLRQP +VP AYAKVMKKLNFC
Subjt:  TPVTSKLKKTKLKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTCAGGTGGTGCTCGAAGCTCCGATCGGCGGCGGCGAAACCATCTCGAATTGTGCATTCCGTTTCTTCCACCCGCAGGATCTTTCACTCTGCTCCATCACCGTACCA
GCCTCTCCATTTCTGTCCGAATAATTTGAGTTCTCGGTCCCTTTTCAATGCATGTCTACAGACTCATTCTTCGCTCGCGGCTTACCAGTGTACTCGTTCTTCGTTTTTGC
CTCTCTCTGTTGTTCAAGTGCGGCATGTTTCGTCAAGAGAGCGACGGAAGAGGAGAAAGCCGATGACGCCAGTCACTTCCAAATTGAAGAAAACTAAGTTGAAATTTTAC
TCGTCTTACAAGTCTAGGTTTTGGATGATGAAGGATGGGAGCATTAAACGTAGAAAGGAAGGGAAAAGGCACAATGCTCATTCCAAGTCCAAAAAATCAAAGCGTAGACT
GAGACAGCCAGCCATTGTGCCATTAGCTTATGCCAAGGTAATGAAGAAGCTCAACTTTTGTGGTTAA

mRNA sequence

Show/hide mRNA sequence

GGTTTCTCTCTCTCTGAAAAATTTCCCCTTCGCCATTGAGTACGAGGACGACGATGCTCAGGTGGTGCTCGAAGCTCCGATCGGCGGCGGCGAAACCATCTCGAATTGTG
CATTCCGTTTCTTCCACCCGCAGGATCTTTCACTCTGCTCCATCACCGTACCAGCCTCTCCATTTCTGTCCGAATAATTTGAGTTCTCGGTCCCTTTTCAATGCATGTCT
ACAGACTCATTCTTCGCTCGCGGCTTACCAGTGTACTCGTTCTTCGTTTTTGCCTCTCTCTGTTGTTCAAGTGCGGCATGTTTCGTCAAGAGAGCGACGGAAGAGGAGAA
AGCCGATGACGCCAGTCACTTCCAAATTGAAGAAAACTAAGTTGAAATTTTACTCGTCTTACAAGTCTAGGTTTTGGATGATGAAGGATGGGAGCATTAAACGTAGAAAG
GAAGGGAAAAGGCACAATGCTCATTCCAAGTCCAAAAAATCAAAGCGTAGACTGAGACAGCCAGCCATTGTGCCATTAGCTTATGCCAAGGTAATGAAGAAGCTCAACTT
TTGTGGTTAAATTATCGGTATAATCCTTGCTCGCTCCTCTTTTGGATTTTAAATTCAGAGTCCCCTAGAACAAAGTAAGATAGAGACGTGGACCTCGTCTCCACCCTCCA
TTTAATTTTCTATTCCCTCGAAATTCTCCTTTAAATTTATTGAGGATTGGGGTGGAGATTTTCTGCAATAAATTTGTAGAAATAGGGTTCCCCATAATGAATTGTCTTCC
TTTTTTTTAATCTCAGTTATATTTAATGAATTCTGTTGAAAAACATTTAATTAACTAGGTAATTCTCAATAAGAAATCT

Protein sequence

Show/hide protein sequence

MLRWCSKLRSAAAKPSRIVHSVSSTRRIFHSAPSPYQPLHFCPNNLSSRSLFNACLQTHSSLAAYQCTRSSFLPLSVVQVRHVSSRERRKRRKPMTPVTSKLKKTKLKFY
SSYKSRFWMMKDGSIKRRKEGKRHNAHSKSKKSKRRLRQPAIVPLAYAKVMKKLNFCG

Tan0007483 (gene) of Snake gourd v1 genome