; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0007523 (gene) of Snake gourd v1 genome

Gene IDTan0007523
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionVQ domain-containing protein
Genome locationLG08:3570696..3571251
RNA-Seq ExpressionTan0007523
SyntenyTan0007523
Gene Ontology termsGO:0051091 - positive regulation of DNA-binding transcription factor activity (biological process)
InterPro domainsIPR008889 - VQ
IPR039335 - Sigma factor binding protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063578.1 hypothetical protein E6C27_scaffold329G00880 [Cucumis melo var. makuwa]1.4e-0964Show/hide
Query:  MMIKASNAVEFRAIVQQLTGVNSDA-PIRRRNHKSA-----TPSLTSHADQHQMEVFKFSDD-MSSLLEL-DQGC
        MMIKAS+A+EFRAIVQQLTG +S++ P RRRN KS      TPS   HAD+ +MEV KFSDD M+SLL+  DQGC
Subjt:  MMIKASNAVEFRAIVQQLTGVNSDA-PIRRRNHKSA-----TPSLTSHADQHQMEVFKFSDD-MSSLLEL-DQGC

KAG6599333.1 hypothetical protein SDJN03_09111, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2963.64Show/hide
Query:  MGKCGENQDNNQRETQNQNPTKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSDAPIRRRNHK-----SATPSLTSHADQHQMEVFKFSDDMS
        MGKCGEN+  +Q+  Q+QNPT K+QRKPIKVKYISSPMMIKASNA EFRAIVQQLTG  S +P RR NHK     + TPS ++     QME  K SD+MS
Subjt:  MGKCGENQDNNQRETQNQNPTKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSDAPIRRRNHK-----SATPSLTSHADQHQMEVFKFSDDMS

Query:  SLLEL-DQGCF-TRQNLPNNDFMGFQSSCLFQ
        SLLE  D+ CF T  N+  N+FMGFQ+SCLFQ
Subjt:  SLLEL-DQGCF-TRQNLPNNDFMGFQSSCLFQ

KGN60779.1 hypothetical protein Csa_019238 [Cucumis sativus]1.4e-3365.96Show/hide
Query:  MGKCGENQ----DNNQRETQNQNPTKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSDAPIRRRNHK-----SATPSLTSHADQHQMEVFKFS
        MGKCGENQ    +++Q ++QNQNPT K+QRKPIKVKYISSPMMIKASNA+EFRAIVQQLTG +S+ P RRRN K     + TPS   HAD+H+MEV KFS
Subjt:  MGKCGENQ----DNNQRETQNQNPTKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSDAPIRRRNHK-----SATPSLTSHADQHQMEVFKFS

Query:  DD--MSSLLELD-QGCFTRQN----LPNNDFMGFQSSCLFQ
        DD  M SLL+ D QGCF  QN    LPNN  M FQSSC FQ
Subjt:  DD--MSSLLELD-QGCFTRQN----LPNNDFMGFQSSCLFQ

MBA0699683.1 hypothetical protein [Gossypium aridum]2.0e-0844.86Show/hide
Query:  TKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSD--APIRRRNHKSATPSLTSHADQHQMEVFKFSDDMSSLLELDQGCFTRQNLPNNDFMGF
        +KK ++ P+KVKYISSPMM+KASNA EFRAIVQ+LTG +SD   P+        T +  +  D   + +  + DDMSS+   D+G F  + +  N F GF
Subjt:  TKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSD--APIRRRNHKSATPSLTSHADQHQMEVFKFSDDMSSLLELDQGCFTRQNLPNNDFMGF

Query:  QSSCLFQ
        QS  +F+
Subjt:  QSSCLFQ

XP_021282108.1 uncharacterized protein LOC110414990 [Herrania umbratica]1.8e-0947.11Show/hide
Query:  QNQNPTKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSDAPIRRRNHKSATPSLTS------HADQHQMEV------FKFSDDMSSLLELDQG
        +++NPT K ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG NSD      N  +  P   +      H D    +V        F DDMSS LE D+G
Subjt:  QNQNPTKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSDAPIRRRNHKSATPSLTS------HADQHQMEV------FKFSDDMSSLLELDQG

Query:  CFTRQNLPNNDFMGFQSSCLF
         F  + +P N F GFQS  +F
Subjt:  CFTRQNLPNNDFMGFQSSCLF

TrEMBL top hitse value%identityAlignment
A0A0A0LIA7 VQ domain-containing protein6.7e-3465.96Show/hide
Query:  MGKCGENQ----DNNQRETQNQNPTKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSDAPIRRRNHK-----SATPSLTSHADQHQMEVFKFS
        MGKCGENQ    +++Q ++QNQNPT K+QRKPIKVKYISSPMMIKASNA+EFRAIVQQLTG +S+ P RRRN K     + TPS   HAD+H+MEV KFS
Subjt:  MGKCGENQ----DNNQRETQNQNPTKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSDAPIRRRNHK-----SATPSLTSHADQHQMEVFKFS

Query:  DD--MSSLLELD-QGCFTRQN----LPNNDFMGFQSSCLFQ
        DD  M SLL+ D QGCF  QN    LPNN  M FQSSC FQ
Subjt:  DD--MSSLLELD-QGCFTRQN----LPNNDFMGFQSSCLFQ

A0A6J1A533 uncharacterized protein LOC1104149908.8e-1047.11Show/hide
Query:  QNQNPTKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSDAPIRRRNHKSATPSLTS------HADQHQMEV------FKFSDDMSSLLELDQG
        +++NPT K ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG NSD      N  +  P   +      H D    +V        F DDMSS LE D+G
Subjt:  QNQNPTKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSDAPIRRRNHKSATPSLTS------HADQHQMEV------FKFSDDMSSLLELDQG

Query:  CFTRQNLPNNDFMGFQSSCLF
         F  + +P N F GFQS  +F
Subjt:  CFTRQNLPNNDFMGFQSSCLF

A0A7J8YJB9 VQ domain-containing protein9.8e-0944.86Show/hide
Query:  TKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSD--APIRRRNHKSATPSLTSHADQHQMEVFKFSDDMSSLLELDQGCFTRQNLPNNDFMGF
        +KK ++ P+KVKYISSPMM+KASNA EFRAIVQ+LTG +SD   P+        T +  +  D   + +  + DDMSS+   D+G F  + +  N F GF
Subjt:  TKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSD--APIRRRNHKSATPSLTSHADQHQMEVFKFSDDMSSLLELDQGCFTRQNLPNNDFMGF

Query:  QSSCLFQ
        QS  +F+
Subjt:  QSSCLFQ

A0A7J9CV44 VQ domain-containing protein1.3e-0845.28Show/hide
Query:  TKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSD--APIRRRNHKSATPSLTSHADQHQMEVFKFSDDMSSLLELDQGCFTRQNLPNNDFMGF
        +KK ++ P+KVKYISSPMM+KASNA EFRAIVQ+LTG +SD   P+        T +  +  D   + +  + DDMSS+   D+G F  + +  N F GF
Subjt:  TKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSD--APIRRRNHKSATPSLTSHADQHQMEVFKFSDDMSSLLELDQGCFTRQNLPNNDFMGF

Query:  QSSCLF
        QS  +F
Subjt:  QSSCLF

A0A7J9MSD9 VQ domain-containing protein9.8e-0944.86Show/hide
Query:  TKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSD--APIRRRNHKSATPSLTSHADQHQMEVFKFSDDMSSLLELDQGCFTRQNLPNNDFMGF
        +KK ++ P+KVKYISSPMM+KASNA EFRAIVQ+LTG +SD   P+        T +  +  D   + +  + DDMSS+   D+G F  + +  N F GF
Subjt:  TKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSD--APIRRRNHKSATPSLTSHADQHQMEVFKFSDDMSSLLELDQGCFTRQNLPNNDFMGF

Query:  QSSCLFQ
        QS  +F+
Subjt:  QSSCLFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAATGTGGAGAAAATCAAGACAACAATCAAAGGGAGACCCAAAACCAAAACCCCACAAAAAAAATTCAGAGAAAACCCATAAAAGTAAAGTACATTTCAAGTCC
AATGATGATCAAAGCAAGTAATGCAGTTGAGTTCAGAGCCATTGTTCAGCAACTCACCGGCGTCAACTCCGACGCCCCAATTCGCCGGAGAAACCACAAATCAGCTACTC
CATCTTTGACGTCACATGCAGATCAACATCAAATGGAGGTTTTCAAGTTCTCAGACGACATGTCGTCGCTCCTCGAACTCGATCAAGGTTGTTTTACAAGACAGAATCTT
CCCAACAACGACTTTATGGGATTTCAATCTTCTTGTTTGTTTCAATAG
mRNA sequenceShow/hide mRNA sequence
CAATATCTCTCTCTTTTTCTCTCTGATTTGTGAATTTGTGATGGGAAAATGTGGAGAAAATCAAGACAACAATCAAAGGGAGACCCAAAACCAAAACCCCACAAAAAAAA
TTCAGAGAAAACCCATAAAAGTAAAGTACATTTCAAGTCCAATGATGATCAAAGCAAGTAATGCAGTTGAGTTCAGAGCCATTGTTCAGCAACTCACCGGCGTCAACTCC
GACGCCCCAATTCGCCGGAGAAACCACAAATCAGCTACTCCATCTTTGACGTCACATGCAGATCAACATCAAATGGAGGTTTTCAAGTTCTCAGACGACATGTCGTCGCT
CCTCGAACTCGATCAAGGTTGTTTTACAAGACAGAATCTTCCCAACAACGACTTTATGGGATTTCAATCTTCTTGTTTGTTTCAATAGTTGTCTTTGTTGGTTTCGTTGG
CAATTTTAGAAATTTTATACAAAGATTCTGCAATTTTCAAGCTTCAAAATAAAGCTACGATGTATGTATATTTCTCGAGGAGATTTTTTTTTTCCCATTAATTTTGTGAT
TTAAAC
Protein sequenceShow/hide protein sequence
MGKCGENQDNNQRETQNQNPTKKIQRKPIKVKYISSPMMIKASNAVEFRAIVQQLTGVNSDAPIRRRNHKSATPSLTSHADQHQMEVFKFSDDMSSLLELDQGCFTRQNL
PNNDFMGFQSSCLFQ