CuGenDBv2

Gene ID	Tan0007534
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Genome location	LG04:18150410..18151214
RNA-Seq Expression	Tan0007534
Synteny	Tan0007534
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008234 - cysteine-type peptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ADJ18449.1 gag/pol protein, partial [Bryonia dioica]

1.0e-115

80.77

Show/hide

Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG
        MKDLGEAQY+LGIQIVRNRKN+TLAMSQ SYIDK+LSRYKMQNSK G LPFRHG+HLSK+QCPKTPQEVEDMR IPY+SAVGSLMY +L TR DICY++G
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG

Query:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV
        IVSRYQSNPG DHWT VK ILKYLRRTRNY LVYG+ DL LTGYTDSDFQ+DKD+RKSTSG              +KQ CIADSTMEAEYVAACEAAKE 
Subjt:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV

Query:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD
        VWLRKF+TDLEVVPNM+L I L+CDNSGAVANS+EPRSHKRGKH+ERKYHLIREIVHR D
Subjt:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD

KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]

3.2e-114

80.77

Show/hide

Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG
        MKDLGEAQYVLGIQI+R+RKN+TLA+SQ +YIDK+L RY MQNSK GLLPFRHGVHLSK+Q PKTPQEVEDMR IPYASAVGSLMY +L TR DICYA+G
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG

Query:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV
        IVSRYQSNPGLDHWT VK +LKYLRRTR+Y LVYG+ DL LTGYTDSDFQTDKDSRKSTSG              IKQGCIADSTMEAEYVAACEAAKE 
Subjt:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV

Query:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD
        VWLRKF+ DLEVVPNMNL I L+CDNSGAVANS+EPRSHKRGKH+ERKYHLIREIV R D
Subjt:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD

KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa]

8.5e-115

81.54

Show/hide

Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG
        MKDLGEAQYVLGIQI+R+RKN+TLA+SQ +YIDK+L RY MQNSK GLLPFRHGVHLSK+Q PKTPQEVEDMR IPYASAVGSLMYV+L TR DICYA+G
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG

Query:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV
        IVSRYQSNPGLDHWT VK ILKYLRRTR+Y LVYG+ DL LTGYTDSDFQTDKDSRKSTSG              IKQGCIADSTMEAEYVAACEAAKE 
Subjt:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV

Query:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD
        VWLRKF+ DLEVVPNMNL I L+CDNSGAVANS+EPRSHKRGKH+ERKYHLIREIV R D
Subjt:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]

3.2e-114

80.77

Show/hide

Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG
        MKDLGEAQYVLGIQI+R+RKN+TLA+SQ +YIDK+L RY MQNSK GLLPFRHGVHLSK+Q PKTPQEVEDMR IPYASAVGSLMY +L TR DICYA+G
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG

Query:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV
        IVSRYQSNPGLDHWT VK +LKYLRRTR+Y LVYG+ DL LTGYTDSDFQTDKDSRKSTSG              IKQGCIADSTMEAEYVAACEAAKE 
Subjt:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV

Query:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD
        VWLRKF+ DLEVVPNMNL I L+CDNSGAVANS+EPRSHKRGKH+ERKYHLIREIV R D
Subjt:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD

KAA0061170.1 gag/pol protein [Cucumis melo var. makuwa]

6.5e-115

81.54

Show/hide

Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG
        MKDLGEAQYVLGIQI+R+RKN+TLA+SQ +YIDK+L RY MQNSK GLLPFRHGVHLSK+Q PKTPQEVEDMR IPYASAVGSLMY +L TR DICYA+G
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG

Query:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV
        IVSRYQSNPGLDHWTTVK ILKYLRRTR+Y LVYG+ DL LTGYTDSDFQTDKDSRKSTSG              IKQGCIADSTMEAEYVAACEAAKE 
Subjt:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV

Query:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD
        VWLRKF+ DLEVVPNMNL I L+CDNSGAVANS+EPRSHKRGKH+ERKYHLIREIV R D
Subjt:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TKM4 Gag/pol protein

4.1e-115

81.54

Show/hide

Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG
        MKDLGEAQYVLGIQI+R+RKN+TLA+SQ +YIDK+L RY MQNSK GLLPFRHGVHLSK+Q PKTPQEVEDMR IPYASAVGSLMYV+L TR DICYA+G
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG

Query:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV
        IVSRYQSNPGLDHWT VK ILKYLRRTR+Y LVYG+ DL LTGYTDSDFQTDKDSRKSTSG              IKQGCIADSTMEAEYVAACEAAKE 
Subjt:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV

Query:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD
        VWLRKF+ DLEVVPNMNL I L+CDNSGAVANS+EPRSHKRGKH+ERKYHLIREIV R D
Subjt:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD

A0A5A7TZD0 Gag/pol protein

1.6e-114

80.77

Show/hide

Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG
        MKDLGEAQYVLGIQI+R+RKN+TLA+SQ +YIDK+L RY MQNSK GLLPFRHGVHLSK+Q PKTPQEVEDMR IPYASAVGSLMY +L TR DICYA+G
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG

Query:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV
        IVSRYQSNPGLDHWT VK +LKYLRRTR+Y LVYG+ DL LTGYTDSDFQTDKDSRKSTSG              IKQGCIADSTMEAEYVAACEAAKE 
Subjt:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV

Query:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD
        VWLRKF+ DLEVVPNMNL I L+CDNSGAVANS+EPRSHKRGKH+ERKYHLIREIV R D
Subjt:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD

A0A5A7UYE8 Gag/pol protein

1.6e-114

80.77

Show/hide

Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG
        MKDLGEAQYVLGIQI+R+RKN+TLA+SQ +YIDK+L RY MQNSK GLLPFRHGVHLSK+Q PKTPQEVEDMR IPYASAVGSLMY +L TR DICYA+G
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG

Query:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV
        IVSRYQSNPGLDHWT VK +LKYLRRTR+Y LVYG+ DL LTGYTDSDFQTDKDSRKSTSG              IKQGCIADSTMEAEYVAACEAAKE 
Subjt:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV

Query:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD
        VWLRKF+ DLEVVPNMNL I L+CDNSGAVANS+EPRSHKRGKH+ERKYHLIREIV R D
Subjt:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD

A0A5A7V1F5 Gag/pol protein

3.2e-115

81.54

Show/hide

Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG
        MKDLGEAQYVLGIQI+R+RKN+TLA+SQ +YIDK+L RY MQNSK GLLPFRHGVHLSK+Q PKTPQEVEDMR IPYASAVGSLMY +L TR DICYA+G
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG

Query:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV
        IVSRYQSNPGLDHWTTVK ILKYLRRTR+Y LVYG+ DL LTGYTDSDFQTDKDSRKSTSG              IKQGCIADSTMEAEYVAACEAAKE 
Subjt:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV

Query:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD
        VWLRKF+ DLEVVPNMNL I L+CDNSGAVANS+EPRSHKRGKH+ERKYHLIREIV R D
Subjt:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD

E2GK51 Gag/pol protein (Fragment)

4.9e-116

80.77

Show/hide

Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG
        MKDLGEAQY+LGIQIVRNRKN+TLAMSQ SYIDK+LSRYKMQNSK G LPFRHG+HLSK+QCPKTPQEVEDMR IPY+SAVGSLMY +L TR DICY++G
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG

Query:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV
        IVSRYQSNPG DHWT VK ILKYLRRTRNY LVYG+ DL LTGYTDSDFQ+DKD+RKSTSG              +KQ CIADSTMEAEYVAACEAAKE 
Subjt:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSG--------------IKQGCIADSTMEAEYVAACEAAKEV

Query:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD
        VWLRKF+TDLEVVPNM+L I L+CDNSGAVANS+EPRSHKRGKH+ERKYHLIREIVHR D
Subjt:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIVHRMD

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

7.9e-31

31.94

Show/hide

Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVH---LSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICY
        M DL E ++ +GI+I    +   + +SQ++Y+ KILS++ M+N      P    ++   L+ D+   T          P  S +G LMY++L TR D+  
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVH---LSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICY

Query:  AIGIVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLF---LTGYTDSDFQTDKDSRKSTSGI---------------KQGCIADSTMEAEYVAA
        A+ I+SRY S    + W  +K +L+YL+ T +  L++     F   + GY DSD+   +  RKST+G                +Q  +A S+ EAEY+A 
Subjt:  AIGIVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLF---LTGYTDSDFQTDKDSRKSTSGI---------------KQGCIADSTMEAEYVAA

Query:  CEAAKEVVWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIV
         EA +E +WL+  +T + +   +   I ++ DN G ++ +  P  HKR KH++ KYH  RE V
Subjt:  CEAAKEVVWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIV

P0CV72 Secreted RxLR effector protein 161

1.3e-20

39.85

Show/hide

Query:  MRCIPYASAVGSLMYVLLYTRSDICYAIGIVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVY-GSGDLFLTGYTDSDFQTDKDSRKSTSGI--------
        M+ +PY SAVG++MY+++ TR D+  A+G++S++ S+P   HW  +K +L+YL+ T+ Y L +  +G   L GY+D+D+  D +SR+STSG         
Subjt:  MRCIPYASAVGSLMYVLLYTRSDICYAIGIVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVY-GSGDLFLTGYTDSDFQTDKDSRKSTSGI--------

Query:  ------KQGCIADSTMEAEYVAACEAAKEVVWL
              KQ  +A S+ E EY+A  EA +E VWL
Subjt:  ------KQGCIADSTMEAEYVAACEAAKEVVWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.0e-54

43.75

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Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG
        MKDLG AQ +LG++IVR R +R L +SQ  YI+++L R+ M+N+K    P    + LSK  CP T +E  +M  +PY+SAVGSLMY ++ TR DI +A+G
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG

Query:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSGI--------------KQGCIADSTMEAEYVAACEAAKEV
        +VSR+  NPG +HW  VK IL+YLR T    L +G  D  L GYTD+D   D D+RKS++G                Q C+A ST EAEY+AA E  KE+
Subjt:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSGI--------------KQGCIADSTMEAEYVAACEAAKEV

Query:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIV
        +WL++F+ +L +         ++CD+  A+  S+    H R KH++ +YH IRE+V
Subjt:  VWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIV

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

2.3e-22

32.3

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Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG
        +KD  E  Y LGI+    R    L +SQ  YI  +L+R  M  +K    P      LS     K     E      Y   VGSL Y L +TR DI YA+ 
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG

Query:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGD-LFLTGYTDSDFQTDKDSRKSTSGI--------------KQGCIADSTMEAEYVAACEAAKE
         +S++   P  +H   +K IL+YL  T N+ +    G+ L L  Y+D+D+  DKD   ST+G               KQ  +  S+ EAEY +    + E
Subjt:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGD-LFLTGYTDSDFQTDKDSRKSTSGI--------------KQGCIADSTMEAEYVAACEAAKE

Query:  VVWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIV
        + W+   +T+L +   +     ++CDN GA      P  H R KH+   YH IR  V
Subjt:  VVWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

4.7e-23

30.74

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Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG
        +K+  +  Y LGI+    R  + L +SQ  Y   +L+R  M  +K    P      L+     K P   E      Y   VGSL Y L +TR D+ YA+ 
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG

Query:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGD-LFLTGYTDSDFQTDKDSRKSTSGI--------------KQGCIADSTMEAEYVAACEAAKE
         +S+Y   P  DHW  +K +L+YL  T ++ +    G+ L L  Y+D+D+  D D   ST+G               KQ  +  S+ EAEY +    + E
Subjt:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGSGD-LFLTGYTDSDFQTDKDSRKSTSGI--------------KQGCIADSTMEAEYVAACEAAKE

Query:  VVWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIV
        + W+   +T+L +   ++    ++CDN GA      P  H R KH+   YH IR  V
Subjt:  VVWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIREIV

Arabidopsis top hits

e value

%identity

Alignment

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8

1.8e-22

30.2

Show/hide

Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG
        ++DLG  +Y LG++I R+     + + Q  Y   +L    +   K   +P    V  S      +  +  D +   Y   +G LMY L  TR DI +A+ 
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIG

Query:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGS-GDLFLTGYTDSDFQTDKDSRKSTSGI--------------KQGCIADSTMEAEYVAACEAAKE
         +S++   P L H   V  IL Y++ T    L Y S  ++ L  ++D+ FQ+ KD+R+ST+G               KQ  ++ S+ EAEY A   A  E
Subjt:  IVSRYQSNPGLDHWTTVKAILKYLRRTRNYSLVYGS-GDLFLTGYTDSDFQTDKDSRKSTSGI--------------KQGCIADSTMEAEYVAACEAAKE

Query:  VVWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIRE
        ++WL +F  +L++   ++    LFCDN+ A+  +     H+R KH+E   H +RE
Subjt:  VVWLRKFITDLEVVPNMNLSIALFCDNSGAVANSREPRSHKRGKHMERKYHLIRE

ATMG00810.1 DNA/RNA polymerases superfamily protein

2.4e-14

31.22

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Query:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSK--NGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYA
        MKDLG   Y LGIQI  +     L +SQT Y ++IL+   M + K  +  LP +    +S  + P    +  D R     S VG+L Y+ L TR DI YA
Subjt:  MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSK--NGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYA

Query:  IGIVSRYQSNPGLDHWTTVKAILKYLRRTRNYSL-VYGSGDLFLTGYTDSDFQTDKDSRKSTSGI--------------KQGCIADSTMEAEYVAACEAA
        + IV +    P L  +  +K +L+Y++ T  + L ++ +  L +  + DSD+     +R+ST+G               +Q  ++ S+ E EY A    A
Subjt:  IGIVSRYQSNPGLDHWTTVKAILKYLRRTRNYSL-VYGSGDLFLTGYTDSDFQTDKDSRKSTSGI--------------KQGCIADSTMEAEYVAACEAA

Query:  KEVVW
         E+ W
Subjt:  KEVVW

Sequences

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CDS sequence

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ATGAAAGATTTGGGAGAAGCTCAGTATGTTCTAGGTATCCAGATTGTCCGGAACCGGAAGAACAGAACGTTGGCCATGTCTCAAACGTCTTATATTGATAAGATATTGTC
TAGATATAAGATGCAGAACTCCAAGAACGGCTTACTGCCTTTCAGGCATGGGGTTCACCTGTCTAAGGATCAGTGTCCTAAGACTCCTCAAGAGGTTGAGGATATGAGAT
GTATCCCCTATGCTTCAGCTGTAGGGAGCCTGATGTATGTCCTGTTGTATACTAGGTCTGACATCTGTTATGCAATAGGGATTGTAAGTAGGTATCAATCCAATCCAGGA
TTAGATCACTGGACAACCGTAAAGGCAATCCTCAAGTATCTTAGGAGAACGAGGAACTACAGCTTAGTGTATGGAAGTGGGGATTTGTTCCTTACAGGATACACAGATTC
TGACTTTCAGACCGATAAGGATTCTAGGAAATCCACTTCGGGCATCAAGCAGGGATGCATCGCTGATTCCACTATGGAAGCAGAGTACGTTGCGGCTTGTGAAGCTGCAA
AGGAAGTTGTTTGGCTTAGAAAGTTCATAACCGATTTGGAAGTTGTTCCAAATATGAATTTGTCGATCGCACTGTTTTGTGACAACAGTGGTGCAGTAGCCAACTCCAGA
GAGCCTCGGAGCCATAAGAGAGGCAAACACATGGAGCGGAAGTATCACCTAATACGGGAGATTGTGCACCGCATGGACGCGTGGCGATCCACGCGCAGATAG

mRNA sequence

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Protein sequence

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MKDLGEAQYVLGIQIVRNRKNRTLAMSQTSYIDKILSRYKMQNSKNGLLPFRHGVHLSKDQCPKTPQEVEDMRCIPYASAVGSLMYVLLYTRSDICYAIGIVSRYQSNPG
LDHWTTVKAILKYLRRTRNYSLVYGSGDLFLTGYTDSDFQTDKDSRKSTSGIKQGCIADSTMEAEYVAACEAAKEVVWLRKFITDLEVVPNMNLSIALFCDNSGAVANSR
EPRSHKRGKHMERKYHLIREIVHRMDAWRSTRR

Tan0007534 (gene) of Snake gourd v1 genome